Probiotic potential risk score


ARGs VFs PGs PPRS
0011.00

PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).

Antibiotic resistance genes


Comprehensive Antibiotic Resistance Database (CARD)

Query ID Begin End ARO name ARO accession CARD name Identity Coverage Accession no.
No hit found

RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)

ResFinder

Query ID Begin End Resistance gene Phenotype Identity Coverage Accession no.
No hit found

ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)

AMRFinderPlus

Query ID Begin End Gene symbol Sequence name Method Identity Coverage Accession no.
No hit found

AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)

Virulence factors


Virulence Factor Database (VFDB)

Query ID qstart qend Gene name e-value VF name VF category Identity Coverage Accession no.
No hit found

BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)

VirulenceFinder

Query ID Begin End Database Virulence factor Protein function Identity Coverage Accession no.
No hit found

VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)

Pathogenic genes


PHI-base

Query ID qstart qend Gene name e-value Function Identity Coverage Gene ID
FFMEKADO_996734267536CspA5.01e-28cold shock protein83.0898.48CAA62903

BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)

Plasmid


PlasmidFinder

Query ID Begin End Plasmid Query / Template Identity Accession no.
No hit found

PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)

PlasmidHunter

Query ID Prediction Chromosome Plasmid
FFMEKADO_170.01.00.0
FFMEKADO_420.01.00.0
FFMEKADO_571.00.01.0
FFMEKADO_660.01.00.0
FFMEKADO_670.01.00.0
FFMEKADO_831.00.01.0
FFMEKADO_840.01.00.0
FFMEKADO_970.01.00.0
FFMEKADO_980.01.00.0
FFMEKADO_990.01.00.0
FFMEKADO_1090.01.00.0
FFMEKADO_1100.01.00.0
FFMEKADO_1290.01.00.0
FFMEKADO_1310.01.00.0
FFMEKADO_1320.01.00.0
FFMEKADO_1330.01.00.0
FFMEKADO_1341.00.01.0
FFMEKADO_1360.01.00.0
FFMEKADO_1370.01.00.0
FFMEKADO_1380.01.00.0
FFMEKADO_1390.01.00.0
FFMEKADO_1400.01.00.0
FFMEKADO_1410.01.00.0
FFMEKADO_1420.01.00.0
FFMEKADO_1430.01.00.0
FFMEKADO_1440.01.00.0
FFMEKADO_1451.00.01.0
FFMEKADO_1470.01.00.0
FFMEKADO_1480.01.00.0
FFMEKADO_1490.01.00.0
FFMEKADO_1501.00.01.0
FFMEKADO_1510.01.00.0
FFMEKADO_1520.01.00.0
FFMEKADO_1530.01.00.0
FFMEKADO_1540.01.00.0
FFMEKADO_1550.01.00.0
FFMEKADO_1560.01.00.0
FFMEKADO_1580.01.00.0
FFMEKADO_1590.01.00.0
FFMEKADO_1600.01.00.0
FFMEKADO_1610.01.00.0
FFMEKADO_1620.01.00.0
FFMEKADO_1630.01.00.0
FFMEKADO_1640.01.00.0
FFMEKADO_1650.01.00.0
FFMEKADO_1660.01.00.0
FFMEKADO_1670.01.00.0
FFMEKADO_1681.00.01.0
FFMEKADO_1690.01.00.0
FFMEKADO_1700.01.00.0
FFMEKADO_1711.00.01.0
FFMEKADO_1721.00.01.0
FFMEKADO_1730.01.00.0
FFMEKADO_1741.00.01.0
FFMEKADO_1750.01.00.0
FFMEKADO_1760.01.00.0
FFMEKADO_1770.01.00.0
FFMEKADO_1780.01.00.0
FFMEKADO_1790.01.00.0
FFMEKADO_1801.00.01.0
FFMEKADO_1810.01.00.0
FFMEKADO_1820.01.00.0
FFMEKADO_1830.01.00.0
FFMEKADO_1840.01.00.0
FFMEKADO_1850.01.00.0
FFMEKADO_1860.01.00.0
FFMEKADO_1870.01.00.0
FFMEKADO_1880.01.00.0
FFMEKADO_1890.01.00.0
FFMEKADO_1900.01.00.0
FFMEKADO_1910.01.00.0
FFMEKADO_1920.01.00.0
FFMEKADO_2080.01.00.0
FFMEKADO_2510.01.00.0
FFMEKADO_2520.01.00.0
FFMEKADO_2660.01.00.0
FFMEKADO_2671.00.01.0

PlasmidHunter v 1.4.5 (Database: May. 2024 release)

Prophage


Phigaro

Query ID Begin End Transposable Taxonomy pVOGs
FFMEKADO_140428431567FalseSiphoviridaeVOG0641, VOG0648, VOG9888, VOG10608, VOG1335, VOG6163, VOG1334, VOG1333, VOG4634, VOG0704, VOG1900, VOG1330, VOG4713, VOG1887, VOG3434, VOG4555, VOG4564, VOG0720, VOG4544, VOG0796, VOG0195, VOG9331
FFMEKADO_1741886436308FalseSiphoviridaeVOG0198, VOG0866, VOG4841, VOG4581, VOG9312, VOG0866, VOG1886, VOG4556, VOG4573, VOG4553, VOG0204, VOG0205, VOG0207, VOG0209

Phigaro v2.4.0 (Database: Jan. 2024 release)


Insertion sequence (IS) elements