Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 0 | 0 | 1 | 1.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| No hit found | |||||||
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| GOODBGAL_74 | 18379 | 18576 | CspA | 5.85e-29 | cold shock protein | 80.30 | 100.00 | CAA62903 |
| GOODBGAL_74 | 18379 | 18573 | CspR | 2.54e-28 | cold shock protein | 81.54 | 98.48 | AAO82613 |
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| No hit found | ||||||
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| GOODBGAL_1 | 1.0 | 0.0 | 1.0 |
| GOODBGAL_2 | 0.0 | 1.0 | 0.0 |
| GOODBGAL_3 | 1.0 | 0.0 | 1.0 |
| GOODBGAL_4 | 1.0 | 0.0 | 1.0 |
| GOODBGAL_5 | 0.0 | 1.0 | 0.0 |
| GOODBGAL_7 | 0.0 | 1.0 | 0.0 |
| GOODBGAL_8 | 1.0 | 0.0 | 1.0 |
| GOODBGAL_9 | 0.0 | 1.0 | 0.0 |
| GOODBGAL_10 | 1.0 | 0.0 | 1.0 |
| GOODBGAL_11 | 1.0 | 0.0 | 1.0 |
| GOODBGAL_12 | 1.0 | 0.0 | 1.0 |
| GOODBGAL_13 | 0.0 | 1.0 | 0.0 |
| GOODBGAL_14 | 1.0 | 0.0 | 1.0 |
| GOODBGAL_15 | 1.0 | 0.0 | 1.0 |
| GOODBGAL_16 | 1.0 | 0.0 | 1.0 |
| GOODBGAL_24 | 0.0 | 1.0 | 0.0 |
| GOODBGAL_35 | 0.0 | 1.0 | 0.0 |
| GOODBGAL_46 | 0.0 | 1.0 | 0.0 |
| GOODBGAL_57 | 0.0 | 1.0 | 0.0 |
| GOODBGAL_67 | 0.0 | 1.0 | 0.0 |
| GOODBGAL_68 | 0.0 | 1.0 | 0.0 |
| GOODBGAL_69 | 1.0 | 0.0 | 1.0 |
| GOODBGAL_70 | 0.0 | 1.0 | 0.0 |
| GOODBGAL_71 | 0.0 | 1.0 | 0.0 |
| GOODBGAL_72 | 0.0 | 1.0 | 0.0 |
| GOODBGAL_73 | 0.0 | 1.0 | 0.0 |
| GOODBGAL_74 | 0.0 | 1.0 | 0.0 |
| GOODBGAL_75 | 0.0 | 1.0 | 0.0 |
| GOODBGAL_76 | 0.0 | 1.0 | 0.0 |
| GOODBGAL_77 | 0.0 | 1.0 | 0.0 |
| GOODBGAL_78 | 0.0 | 1.0 | 0.0 |
| GOODBGAL_79 | 0.0 | 1.0 | 0.0 |
| GOODBGAL_80 | 0.0 | 1.0 | 0.0 |
| GOODBGAL_81 | 0.0 | 1.0 | 0.0 |
| GOODBGAL_82 | 0.0 | 1.0 | 0.0 |
| GOODBGAL_83 | 0.0 | 1.0 | 0.0 |
| GOODBGAL_84 | 0.0 | 1.0 | 0.0 |
| GOODBGAL_85 | 0.0 | 1.0 | 0.0 |
| GOODBGAL_86 | 0.0 | 1.0 | 0.0 |
| GOODBGAL_87 | 0.0 | 1.0 | 0.0 |
| GOODBGAL_88 | 0.0 | 1.0 | 0.0 |
| GOODBGAL_89 | 0.0 | 1.0 | 0.0 |
| GOODBGAL_90 | 0.0 | 1.0 | 0.0 |
| GOODBGAL_91 | 0.0 | 1.0 | 0.0 |
| GOODBGAL_92 | 0.0 | 1.0 | 0.0 |
| GOODBGAL_93 | 0.0 | 1.0 | 0.0 |
| GOODBGAL_94 | 0.0 | 1.0 | 0.0 |
| GOODBGAL_95 | 1.0 | 0.0 | 1.0 |
| GOODBGAL_96 | 0.0 | 1.0 | 0.0 |
| GOODBGAL_97 | 1.0 | 0.0 | 1.0 |
| GOODBGAL_98 | 0.0 | 1.0 | 0.0 |
| GOODBGAL_99 | 0.0 | 1.0 | 0.0 |
| GOODBGAL_100 | 0.0 | 1.0 | 0.0 |
| GOODBGAL_101 | 0.0 | 1.0 | 0.0 |
| GOODBGAL_102 | 0.0 | 1.0 | 0.0 |
| GOODBGAL_103 | 0.0 | 1.0 | 0.0 |
| GOODBGAL_104 | 0.0 | 1.0 | 0.0 |
| GOODBGAL_105 | 0.0 | 1.0 | 0.0 |
| GOODBGAL_106 | 0.0 | 1.0 | 0.0 |
| GOODBGAL_107 | 0.0 | 1.0 | 0.0 |
| GOODBGAL_108 | 0.0 | 1.0 | 0.0 |
| GOODBGAL_109 | 0.0 | 1.0 | 0.0 |
| GOODBGAL_110 | 0.0 | 1.0 | 0.0 |
| GOODBGAL_111 | 0.0 | 1.0 | 0.0 |
| GOODBGAL_112 | 1.0 | 0.0 | 1.0 |
| GOODBGAL_113 | 0.0 | 1.0 | 0.0 |
| GOODBGAL_114 | 0.0 | 1.0 | 0.0 |
| GOODBGAL_115 | 0.0 | 1.0 | 0.0 |
| GOODBGAL_116 | 0.0 | 1.0 | 0.0 |
| GOODBGAL_117 | 0.0 | 1.0 | 0.0 |
| GOODBGAL_118 | 0.0 | 1.0 | 0.0 |
| GOODBGAL_119 | 0.0 | 1.0 | 0.0 |
| GOODBGAL_120 | 0.0 | 1.0 | 0.0 |
| GOODBGAL_121 | 0.0 | 1.0 | 0.0 |
| GOODBGAL_122 | 1.0 | 0.0 | 1.0 |
| GOODBGAL_123 | 0.0 | 1.0 | 0.0 |
| GOODBGAL_124 | 0.0 | 1.0 | 0.0 |
| GOODBGAL_125 | 0.0 | 1.0 | 0.0 |
| GOODBGAL_126 | 0.0 | 1.0 | 0.0 |
| GOODBGAL_127 | 0.0 | 1.0 | 0.0 |
| GOODBGAL_128 | 1.0 | 0.0 | 1.0 |
| GOODBGAL_129 | 0.0 | 1.0 | 0.0 |
| GOODBGAL_130 | 0.0 | 1.0 | 0.0 |
| GOODBGAL_131 | 0.0 | 1.0 | 0.0 |
| GOODBGAL_132 | 0.0 | 1.0 | 0.0 |
| GOODBGAL_133 | 0.0 | 1.0 | 0.0 |
| GOODBGAL_134 | 1.0 | 0.0 | 1.0 |
| GOODBGAL_135 | 1.0 | 0.0 | 1.0 |
| GOODBGAL_136 | 0.0 | 1.0 | 0.0 |
| GOODBGAL_137 | 0.0 | 1.0 | 0.0 |
| GOODBGAL_138 | 0.0 | 1.0 | 0.0 |
| GOODBGAL_139 | 0.0 | 1.0 | 0.0 |
| GOODBGAL_140 | 0.0 | 1.0 | 0.0 |
| GOODBGAL_141 | 0.0 | 1.0 | 0.0 |
| GOODBGAL_142 | 0.0 | 1.0 | 0.0 |
| GOODBGAL_144 | 1.0 | 0.0 | 1.0 |
| GOODBGAL_145 | 0.0 | 1.0 | 0.0 |
| GOODBGAL_146 | 1.0 | 0.0 | 1.0 |
| GOODBGAL_147 | 0.0 | 1.0 | 0.0 |
| GOODBGAL_148 | 0.0 | 1.0 | 0.0 |
| GOODBGAL_149 | 0.0 | 1.0 | 0.0 |
| GOODBGAL_150 | 1.0 | 0.0 | 1.0 |
| GOODBGAL_151 | 1.0 | 0.0 | 1.0 |
| GOODBGAL_152 | 1.0 | 0.0 | 1.0 |
| GOODBGAL_153 | 0.0 | 1.0 | 0.0 |
| GOODBGAL_154 | 0.0 | 1.0 | 0.0 |
| GOODBGAL_155 | 1.0 | 0.0 | 1.0 |
| GOODBGAL_156 | 1.0 | 0.0 | 1.0 |
| GOODBGAL_157 | 1.0 | 0.0 | 1.0 |
| GOODBGAL_158 | 1.0 | 0.0 | 1.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| GOODBGAL_1 | 6044 | 28811 | False | Siphoviridae | VOG0025, VOG0377, VOG4593, VOG1344, VOG8685, VOG3307, VOG3643, VOG0638, VOG3307, VOG3307, VOG3501, VOG9048, VOG1026, VOG0676, VOG2352, VOG7712, VOG5176, VOG7255, VOG2606, VOG4146, VOG5292 |
| GOODBGAL_1 | 51235 | 91251 | True | Unknown | VOG6921, VOG5530, VOG6506, VOG0275, VOG1026, VOG6282, VOG0054, VOG0753, VOG0648, VOG9091, VOG10609, VOG10972, VOG5534, VOG9713, VOG7629, VOG6036, VOG6941, VOG6246, VOG6524, VOG6031, VOG5721, VOG4544, VOG5722 |
| GOODBGAL_68 | 18452 | 40266 | False | Siphoviridae | VOG0703, VOG8917, VOG4705, VOG6243, VOG8438, VOG9086, VOG3462, VOG0801, VOG6163, VOG0209, VOG4586, VOG0207, VOG4317, VOG0205, VOG0204, VOG4568, VOG4556, VOG6760, VOG1886, VOG4581, VOG4841, VOG6888 |
| GOODBGAL_69 | 4364 | 31383 | False | Siphoviridae | VOG4841, VOG4581, VOG4544, VOG4556, VOG4573, VOG4553, VOG0204, VOG0205, VOG0207, VOG4586, VOG6698, VOG8263, VOG0801, VOG3462, VOG10972, VOG9997, VOG4856, VOG10223, VOG8917 |
| GOODBGAL_82 | 69769 | 73524 | False | Myoviridae | VOG7424, VOG6422, VOG4821, VOG0862, VOG2215 |
| GOODBGAL_148 | 20120 | 38538 | False | Myoviridae | VOG0189, VOG5235, VOG0083, VOG0382, VOG0384, VOG0205, VOG0226, VOG6085, VOG0025, VOG8295 |
Phigaro v2.4.0 (Database: Jan. 2024 release)