Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 0 | 0 | 0 | 0.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| No hit found | |||||||
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| No hit found | ||||||
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| PBHMIDNA_1 | 0.0 | 1.0 | 0.0 |
| PBHMIDNA_2 | 0.0 | 1.0 | 0.0 |
| PBHMIDNA_13 | 0.0 | 1.0 | 0.0 |
| PBHMIDNA_24 | 0.0 | 1.0 | 0.0 |
| PBHMIDNA_35 | 0.0 | 1.0 | 0.0 |
| PBHMIDNA_46 | 0.0 | 1.0 | 0.0 |
| PBHMIDNA_51 | 0.0 | 1.0 | 0.0 |
| PBHMIDNA_52 | 0.0 | 1.0 | 0.0 |
| PBHMIDNA_53 | 0.0 | 1.0 | 0.0 |
| PBHMIDNA_54 | 0.0 | 1.0 | 0.0 |
| PBHMIDNA_55 | 0.0 | 1.0 | 0.0 |
| PBHMIDNA_56 | 0.0 | 1.0 | 0.0 |
| PBHMIDNA_57 | 0.0 | 1.0 | 0.0 |
| PBHMIDNA_58 | 0.0 | 1.0 | 0.0 |
| PBHMIDNA_59 | 0.0 | 1.0 | 0.0 |
| PBHMIDNA_60 | 0.0 | 1.0 | 0.0 |
| PBHMIDNA_61 | 1.0 | 0.0 | 1.0 |
| PBHMIDNA_62 | 0.0 | 1.0 | 0.0 |
| PBHMIDNA_63 | 0.0 | 1.0 | 0.0 |
| PBHMIDNA_64 | 0.0 | 1.0 | 0.0 |
| PBHMIDNA_65 | 0.0 | 1.0 | 0.0 |
| PBHMIDNA_66 | 0.0 | 1.0 | 0.0 |
| PBHMIDNA_67 | 0.0 | 1.0 | 0.0 |
| PBHMIDNA_68 | 0.0 | 1.0 | 0.0 |
| PBHMIDNA_69 | 0.0 | 1.0 | 0.0 |
| PBHMIDNA_70 | 0.0 | 1.0 | 0.0 |
| PBHMIDNA_71 | 0.0 | 1.0 | 0.0 |
| PBHMIDNA_72 | 0.0 | 1.0 | 0.0 |
| PBHMIDNA_73 | 0.0 | 1.0 | 0.0 |
| PBHMIDNA_75 | 0.0 | 1.0 | 0.0 |
| PBHMIDNA_77 | 1.0 | 0.0 | 1.0 |
| PBHMIDNA_78 | 0.0 | 1.0 | 0.0 |
| PBHMIDNA_89 | 0.0 | 1.0 | 0.0 |
| PBHMIDNA_100 | 0.0 | 1.0 | 0.0 |
| PBHMIDNA_111 | 0.0 | 1.0 | 0.0 |
| PBHMIDNA_122 | 0.0 | 1.0 | 0.0 |
| PBHMIDNA_133 | 0.0 | 1.0 | 0.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| PBHMIDNA_2 | 17491 | 26407 | False | Myoviridae | VOG6282, VOG0322, VOG0189, VOG0583, VOG0020 |
| PBHMIDNA_67 | 28618 | 106813 | False | Siphoviridae | VOG0866, VOG9747, VOG0275, VOG1561, VOG0248, VOG4603, VOG8241, VOG7236, VOG0367, VOG10980, VOG0283, VOG2788, VOG4566, VOG0189, VOG0601, VOG0226, VOG4010, VOG4693, VOG6951, VOG0198, VOG0796, VOG10904, VOG10227, VOG0691, VOG0692, VOG4555, VOG4572, VOG5606, VOG0695, VOG0696, VOG0697, VOG0698, VOG9763, VOG0701, VOG5793, VOG4605, VOG4599, VOG10972, VOG9997, VOG0565, VOG9998, VOG0861, VOG7017, VOG0703, VOG0866, VOG9998, VOG0275, VOG1561, VOG0248, VOG4603, VOG8241, VOG7236, VOG0367, VOG10980, VOG0283, VOG2788, VOG4566, VOG0189, VOG0601, VOG0226, VOG4010, VOG4693, VOG6951, VOG0198, VOG0796, VOG10904, VOG10227, VOG0691, VOG0692, VOG4555, VOG4572, VOG5606, VOG0695, VOG0696, VOG0697, VOG0698, VOG9763, VOG0701, VOG5793, VOG4605, VOG4599, VOG10972, VOG9997, VOG0565, VOG9998, VOG0861, VOG7017, VOG0703 |
| PBHMIDNA_89 | 20190 | 25362 | False | Myoviridae | VOG6085, VOG6396, VOG4410, VOG4927 |
Phigaro v2.4.0 (Database: Jan. 2024 release)