Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 0 | 0 | 1 | 1.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| No hit found | |||||||
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| ABHGGIFO_98 | 5484 | 5290 | CspA | 1.18e-28 | cold shock protein | 83.08 | 98.48 | CAA62903 |
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| No hit found | ||||||
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| ABHGGIFO_1 | 0.0 | 1.0 | 0.0 |
| ABHGGIFO_2 | 0.0 | 1.0 | 0.0 |
| ABHGGIFO_3 | 0.0 | 1.0 | 0.0 |
| ABHGGIFO_4 | 0.0 | 1.0 | 0.0 |
| ABHGGIFO_5 | 0.0 | 1.0 | 0.0 |
| ABHGGIFO_6 | 0.0 | 1.0 | 0.0 |
| ABHGGIFO_7 | 0.0 | 1.0 | 0.0 |
| ABHGGIFO_8 | 0.0 | 1.0 | 0.0 |
| ABHGGIFO_9 | 0.0 | 1.0 | 0.0 |
| ABHGGIFO_10 | 0.0 | 1.0 | 0.0 |
| ABHGGIFO_11 | 0.0 | 1.0 | 0.0 |
| ABHGGIFO_12 | 0.0 | 1.0 | 0.0 |
| ABHGGIFO_13 | 0.0 | 1.0 | 0.0 |
| ABHGGIFO_14 | 0.0 | 1.0 | 0.0 |
| ABHGGIFO_15 | 1.0 | 0.0 | 1.0 |
| ABHGGIFO_16 | 1.0 | 0.0 | 1.0 |
| ABHGGIFO_17 | 0.0 | 1.0 | 0.0 |
| ABHGGIFO_18 | 0.0 | 1.0 | 0.0 |
| ABHGGIFO_19 | 0.0 | 1.0 | 0.0 |
| ABHGGIFO_20 | 0.0 | 1.0 | 0.0 |
| ABHGGIFO_21 | 1.0 | 0.0 | 1.0 |
| ABHGGIFO_22 | 0.0 | 1.0 | 0.0 |
| ABHGGIFO_23 | 0.0 | 1.0 | 0.0 |
| ABHGGIFO_24 | 1.0 | 0.0 | 1.0 |
| ABHGGIFO_25 | 1.0 | 0.0 | 1.0 |
| ABHGGIFO_26 | 0.0 | 1.0 | 0.0 |
| ABHGGIFO_27 | 1.0 | 0.0 | 1.0 |
| ABHGGIFO_28 | 0.0 | 1.0 | 0.0 |
| ABHGGIFO_29 | 1.0 | 0.0 | 1.0 |
| ABHGGIFO_30 | 0.0 | 1.0 | 0.0 |
| ABHGGIFO_32 | 0.0 | 1.0 | 0.0 |
| ABHGGIFO_33 | 0.0 | 1.0 | 0.0 |
| ABHGGIFO_34 | 0.0 | 1.0 | 0.0 |
| ABHGGIFO_35 | 0.0 | 1.0 | 0.0 |
| ABHGGIFO_36 | 0.0 | 1.0 | 0.0 |
| ABHGGIFO_37 | 0.0 | 1.0 | 0.0 |
| ABHGGIFO_38 | 0.0 | 1.0 | 0.0 |
| ABHGGIFO_39 | 1.0 | 0.0 | 1.0 |
| ABHGGIFO_40 | 0.0 | 1.0 | 0.0 |
| ABHGGIFO_41 | 0.0 | 1.0 | 0.0 |
| ABHGGIFO_42 | 1.0 | 0.0 | 1.0 |
| ABHGGIFO_43 | 0.0 | 1.0 | 0.0 |
| ABHGGIFO_44 | 0.0 | 1.0 | 0.0 |
| ABHGGIFO_45 | 1.0 | 0.0 | 1.0 |
| ABHGGIFO_46 | 1.0 | 0.0 | 1.0 |
| ABHGGIFO_47 | 1.0 | 0.0 | 1.0 |
| ABHGGIFO_49 | 1.0 | 0.0 | 1.0 |
| ABHGGIFO_50 | 1.0 | 0.0 | 1.0 |
| ABHGGIFO_51 | 0.0 | 1.0 | 0.0 |
| ABHGGIFO_52 | 1.0 | 0.0 | 1.0 |
| ABHGGIFO_53 | 0.0 | 1.0 | 0.0 |
| ABHGGIFO_54 | 1.0 | 0.0 | 1.0 |
| ABHGGIFO_55 | 1.0 | 0.0 | 1.0 |
| ABHGGIFO_56 | 1.0 | 0.0 | 1.0 |
| ABHGGIFO_57 | 1.0 | 0.0 | 1.0 |
| ABHGGIFO_58 | 0.0 | 1.0 | 0.0 |
| ABHGGIFO_64 | 0.0 | 1.0 | 0.0 |
| ABHGGIFO_75 | 0.0 | 1.0 | 0.0 |
| ABHGGIFO_80 | 0.0 | 1.0 | 0.0 |
| ABHGGIFO_81 | 0.0 | 1.0 | 0.0 |
| ABHGGIFO_82 | 0.0 | 1.0 | 0.0 |
| ABHGGIFO_83 | 0.0 | 1.0 | 0.0 |
| ABHGGIFO_84 | 0.0 | 1.0 | 0.0 |
| ABHGGIFO_85 | 0.0 | 1.0 | 0.0 |
| ABHGGIFO_86 | 0.0 | 1.0 | 0.0 |
| ABHGGIFO_87 | 0.0 | 1.0 | 0.0 |
| ABHGGIFO_88 | 0.0 | 1.0 | 0.0 |
| ABHGGIFO_89 | 0.0 | 1.0 | 0.0 |
| ABHGGIFO_90 | 1.0 | 0.0 | 1.0 |
| ABHGGIFO_91 | 0.0 | 1.0 | 0.0 |
| ABHGGIFO_92 | 0.0 | 1.0 | 0.0 |
| ABHGGIFO_93 | 0.0 | 1.0 | 0.0 |
| ABHGGIFO_94 | 0.0 | 1.0 | 0.0 |
| ABHGGIFO_95 | 0.0 | 1.0 | 0.0 |
| ABHGGIFO_96 | 0.0 | 1.0 | 0.0 |
| ABHGGIFO_97 | 0.0 | 1.0 | 0.0 |
| ABHGGIFO_98 | 0.0 | 1.0 | 0.0 |
| ABHGGIFO_99 | 0.0 | 1.0 | 0.0 |
| ABHGGIFO_100 | 0.0 | 1.0 | 0.0 |
| ABHGGIFO_101 | 0.0 | 1.0 | 0.0 |
| ABHGGIFO_102 | 0.0 | 1.0 | 0.0 |
| ABHGGIFO_103 | 0.0 | 1.0 | 0.0 |
| ABHGGIFO_104 | 0.0 | 1.0 | 0.0 |
| ABHGGIFO_105 | 0.0 | 1.0 | 0.0 |
| ABHGGIFO_106 | 0.0 | 1.0 | 0.0 |
| ABHGGIFO_107 | 0.0 | 1.0 | 0.0 |
| ABHGGIFO_108 | 0.0 | 1.0 | 0.0 |
| ABHGGIFO_109 | 0.0 | 1.0 | 0.0 |
| ABHGGIFO_110 | 0.0 | 1.0 | 0.0 |
| ABHGGIFO_111 | 0.0 | 1.0 | 0.0 |
| ABHGGIFO_112 | 0.0 | 1.0 | 0.0 |
| ABHGGIFO_113 | 0.0 | 1.0 | 0.0 |
| ABHGGIFO_114 | 0.0 | 1.0 | 0.0 |
| ABHGGIFO_115 | 1.0 | 0.0 | 1.0 |
| ABHGGIFO_116 | 0.0 | 1.0 | 0.0 |
| ABHGGIFO_117 | 1.0 | 0.0 | 1.0 |
| ABHGGIFO_118 | 0.0 | 1.0 | 0.0 |
| ABHGGIFO_119 | 0.0 | 1.0 | 0.0 |
| ABHGGIFO_120 | 0.0 | 1.0 | 0.0 |
| ABHGGIFO_121 | 0.0 | 1.0 | 0.0 |
| ABHGGIFO_122 | 0.0 | 1.0 | 0.0 |
| ABHGGIFO_123 | 0.0 | 1.0 | 0.0 |
| ABHGGIFO_124 | 1.0 | 0.0 | 1.0 |
| ABHGGIFO_125 | 1.0 | 0.0 | 1.0 |
| ABHGGIFO_126 | 0.0 | 1.0 | 0.0 |
| ABHGGIFO_127 | 0.0 | 1.0 | 0.0 |
| ABHGGIFO_128 | 0.0 | 1.0 | 0.0 |
| ABHGGIFO_129 | 0.0 | 1.0 | 0.0 |
| ABHGGIFO_130 | 0.0 | 1.0 | 0.0 |
| ABHGGIFO_131 | 0.0 | 1.0 | 0.0 |
| ABHGGIFO_132 | 0.0 | 1.0 | 0.0 |
| ABHGGIFO_133 | 0.0 | 1.0 | 0.0 |
| ABHGGIFO_134 | 0.0 | 1.0 | 0.0 |
| ABHGGIFO_135 | 0.0 | 1.0 | 0.0 |
| ABHGGIFO_136 | 0.0 | 1.0 | 0.0 |
| ABHGGIFO_137 | 0.0 | 1.0 | 0.0 |
| ABHGGIFO_138 | 0.0 | 1.0 | 0.0 |
| ABHGGIFO_139 | 0.0 | 1.0 | 0.0 |
| ABHGGIFO_140 | 0.0 | 1.0 | 0.0 |
| ABHGGIFO_141 | 0.0 | 1.0 | 0.0 |
| ABHGGIFO_142 | 0.0 | 1.0 | 0.0 |
| ABHGGIFO_143 | 0.0 | 1.0 | 0.0 |
| ABHGGIFO_144 | 0.0 | 1.0 | 0.0 |
| ABHGGIFO_145 | 0.0 | 1.0 | 0.0 |
| ABHGGIFO_146 | 0.0 | 1.0 | 0.0 |
| ABHGGIFO_147 | 0.0 | 1.0 | 0.0 |
| ABHGGIFO_148 | 0.0 | 1.0 | 0.0 |
| ABHGGIFO_149 | 0.0 | 1.0 | 0.0 |
| ABHGGIFO_150 | 0.0 | 1.0 | 0.0 |
| ABHGGIFO_151 | 0.0 | 1.0 | 0.0 |
| ABHGGIFO_152 | 0.0 | 1.0 | 0.0 |
| ABHGGIFO_153 | 0.0 | 1.0 | 0.0 |
| ABHGGIFO_154 | 0.0 | 1.0 | 0.0 |
| ABHGGIFO_155 | 0.0 | 1.0 | 0.0 |
| ABHGGIFO_156 | 0.0 | 1.0 | 0.0 |
| ABHGGIFO_157 | 0.0 | 1.0 | 0.0 |
| ABHGGIFO_158 | 0.0 | 1.0 | 0.0 |
| ABHGGIFO_159 | 0.0 | 1.0 | 0.0 |
| ABHGGIFO_160 | 0.0 | 1.0 | 0.0 |
| ABHGGIFO_161 | 0.0 | 1.0 | 0.0 |
| ABHGGIFO_162 | 1.0 | 0.0 | 1.0 |
| ABHGGIFO_163 | 0.0 | 1.0 | 0.0 |
| ABHGGIFO_164 | 0.0 | 1.0 | 0.0 |
| ABHGGIFO_165 | 0.0 | 1.0 | 0.0 |
| ABHGGIFO_166 | 0.0 | 1.0 | 0.0 |
| ABHGGIFO_167 | 0.0 | 1.0 | 0.0 |
| ABHGGIFO_168 | 0.0 | 1.0 | 0.0 |
| ABHGGIFO_169 | 0.0 | 1.0 | 0.0 |
| ABHGGIFO_170 | 1.0 | 0.0 | 1.0 |
| ABHGGIFO_171 | 0.0 | 1.0 | 0.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| ABHGGIFO_83 | 32626 | 62391 | True | Siphoviridae | VOG4571, VOG0221, VOG0221, VOG0221, VOG0641, VOG4589, VOG0204, VOG4553, VOG4573, VOG4556, VOG6875, VOG4544, VOG4571, VOG4581, VOG6154, VOG0198, VOG4548, VOG0327, VOG4606, VOG0026, VOG0021, VOG1047, VOG7438, VOG0052, VOG8210 |
| ABHGGIFO_83 | 75861 | 81189 | False | Siphoviridae | VOG0221, VOG9502, VOG0641, VOG4589, VOG0204 |
| ABHGGIFO_149 | 15824 | 23707 | False | Myoviridae | VOG0083, VOG0382, VOG0384, VOG10104, VOG0226 |
Phigaro v2.4.0 (Database: Jan. 2024 release)