Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 0 | 0 | 1 | 1.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| No hit found | |||||||
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| PEAPAJCL_136 | 9052 | 8351 | WalR | 8.79e-109 | transcriptional regulatory protein | 80.34 | 99.57 | EPH95667 |
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| PEAPAJCL_132 | 1987 | 3054 | repUS73 | 1068 / 1101 | 95.97 | CP002654 |
| PEAPAJCL_110 | 3512 | 4551 | rep38 | 1042 / 1104 | 88.58 | CP002655 |
| PEAPAJCL_21 | 30 | 954 | repUS64 | 930 / 954 | 85.48 | JN601038 |
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| PEAPAJCL_1 | 0.0 | 1.0 | 0.0 |
| PEAPAJCL_2 | 0.0 | 1.0 | 0.0 |
| PEAPAJCL_3 | 1.0 | 0.0 | 1.0 |
| PEAPAJCL_4 | 0.0 | 1.0 | 0.0 |
| PEAPAJCL_5 | 1.0 | 0.0 | 1.0 |
| PEAPAJCL_6 | 1.0 | 0.0 | 1.0 |
| PEAPAJCL_7 | 1.0 | 0.0 | 1.0 |
| PEAPAJCL_8 | 1.0 | 0.0 | 1.0 |
| PEAPAJCL_9 | 1.0 | 0.0 | 1.0 |
| PEAPAJCL_10 | 1.0 | 0.0 | 1.0 |
| PEAPAJCL_11 | 0.0 | 1.0 | 0.0 |
| PEAPAJCL_13 | 0.0 | 1.0 | 0.0 |
| PEAPAJCL_14 | 0.0 | 1.0 | 0.0 |
| PEAPAJCL_15 | 1.0 | 0.0 | 1.0 |
| PEAPAJCL_16 | 1.0 | 0.0 | 1.0 |
| PEAPAJCL_17 | 1.0 | 0.0 | 1.0 |
| PEAPAJCL_18 | 1.0 | 0.0 | 1.0 |
| PEAPAJCL_19 | 1.0 | 0.0 | 1.0 |
| PEAPAJCL_20 | 0.0 | 1.0 | 0.0 |
| PEAPAJCL_21 | 1.0 | 0.0 | 1.0 |
| PEAPAJCL_22 | 1.0 | 0.0 | 1.0 |
| PEAPAJCL_23 | 1.0 | 0.0 | 1.0 |
| PEAPAJCL_24 | 0.0 | 1.0 | 0.0 |
| PEAPAJCL_25 | 0.0 | 1.0 | 0.0 |
| PEAPAJCL_26 | 1.0 | 0.0 | 1.0 |
| PEAPAJCL_27 | 0.0 | 1.0 | 0.0 |
| PEAPAJCL_28 | 1.0 | 0.0 | 1.0 |
| PEAPAJCL_29 | 1.0 | 0.0 | 1.0 |
| PEAPAJCL_31 | 0.0 | 1.0 | 0.0 |
| PEAPAJCL_32 | 1.0 | 0.0 | 1.0 |
| PEAPAJCL_33 | 0.0 | 1.0 | 0.0 |
| PEAPAJCL_34 | 1.0 | 0.0 | 1.0 |
| PEAPAJCL_35 | 0.0 | 1.0 | 0.0 |
| PEAPAJCL_36 | 1.0 | 0.0 | 1.0 |
| PEAPAJCL_37 | 1.0 | 0.0 | 1.0 |
| PEAPAJCL_38 | 0.0 | 1.0 | 0.0 |
| PEAPAJCL_39 | 1.0 | 0.0 | 1.0 |
| PEAPAJCL_40 | 1.0 | 0.0 | 1.0 |
| PEAPAJCL_41 | 1.0 | 0.0 | 1.0 |
| PEAPAJCL_42 | 1.0 | 0.0 | 1.0 |
| PEAPAJCL_43 | 1.0 | 0.0 | 1.0 |
| PEAPAJCL_44 | 1.0 | 0.0 | 1.0 |
| PEAPAJCL_45 | 1.0 | 0.0 | 1.0 |
| PEAPAJCL_46 | 0.0 | 1.0 | 0.0 |
| PEAPAJCL_47 | 1.0 | 0.0 | 1.0 |
| PEAPAJCL_57 | 0.0 | 1.0 | 0.0 |
| PEAPAJCL_68 | 0.0 | 1.0 | 0.0 |
| PEAPAJCL_78 | 0.0 | 1.0 | 0.0 |
| PEAPAJCL_79 | 0.0 | 1.0 | 0.0 |
| PEAPAJCL_80 | 0.0 | 1.0 | 0.0 |
| PEAPAJCL_81 | 0.0 | 1.0 | 0.0 |
| PEAPAJCL_82 | 1.0 | 0.0 | 1.0 |
| PEAPAJCL_83 | 0.0 | 1.0 | 0.0 |
| PEAPAJCL_84 | 0.0 | 1.0 | 0.0 |
| PEAPAJCL_85 | 0.0 | 1.0 | 0.0 |
| PEAPAJCL_86 | 0.0 | 1.0 | 0.0 |
| PEAPAJCL_87 | 0.0 | 1.0 | 0.0 |
| PEAPAJCL_88 | 0.0 | 1.0 | 0.0 |
| PEAPAJCL_89 | 0.0 | 1.0 | 0.0 |
| PEAPAJCL_90 | 0.0 | 1.0 | 0.0 |
| PEAPAJCL_91 | 0.0 | 1.0 | 0.0 |
| PEAPAJCL_92 | 0.0 | 1.0 | 0.0 |
| PEAPAJCL_93 | 0.0 | 1.0 | 0.0 |
| PEAPAJCL_94 | 0.0 | 1.0 | 0.0 |
| PEAPAJCL_95 | 0.0 | 1.0 | 0.0 |
| PEAPAJCL_96 | 0.0 | 1.0 | 0.0 |
| PEAPAJCL_97 | 0.0 | 1.0 | 0.0 |
| PEAPAJCL_98 | 0.0 | 1.0 | 0.0 |
| PEAPAJCL_99 | 0.0 | 1.0 | 0.0 |
| PEAPAJCL_100 | 0.0 | 1.0 | 0.0 |
| PEAPAJCL_101 | 0.0 | 1.0 | 0.0 |
| PEAPAJCL_102 | 0.0 | 1.0 | 0.0 |
| PEAPAJCL_103 | 0.0 | 1.0 | 0.0 |
| PEAPAJCL_104 | 0.0 | 1.0 | 0.0 |
| PEAPAJCL_105 | 0.0 | 1.0 | 0.0 |
| PEAPAJCL_106 | 0.0 | 1.0 | 0.0 |
| PEAPAJCL_107 | 0.0 | 1.0 | 0.0 |
| PEAPAJCL_108 | 0.0 | 1.0 | 0.0 |
| PEAPAJCL_109 | 0.0 | 1.0 | 0.0 |
| PEAPAJCL_110 | 1.0 | 0.0 | 1.0 |
| PEAPAJCL_111 | 0.0 | 1.0 | 0.0 |
| PEAPAJCL_112 | 1.0 | 0.0 | 1.0 |
| PEAPAJCL_113 | 0.0 | 1.0 | 0.0 |
| PEAPAJCL_114 | 0.0 | 1.0 | 0.0 |
| PEAPAJCL_115 | 0.0 | 1.0 | 0.0 |
| PEAPAJCL_116 | 0.0 | 1.0 | 0.0 |
| PEAPAJCL_117 | 0.0 | 1.0 | 0.0 |
| PEAPAJCL_118 | 0.0 | 1.0 | 0.0 |
| PEAPAJCL_119 | 0.0 | 1.0 | 0.0 |
| PEAPAJCL_120 | 0.0 | 1.0 | 0.0 |
| PEAPAJCL_121 | 0.0 | 1.0 | 0.0 |
| PEAPAJCL_122 | 1.0 | 0.0 | 1.0 |
| PEAPAJCL_123 | 1.0 | 0.0 | 1.0 |
| PEAPAJCL_124 | 1.0 | 0.0 | 1.0 |
| PEAPAJCL_125 | 0.0 | 1.0 | 0.0 |
| PEAPAJCL_126 | 1.0 | 0.0 | 1.0 |
| PEAPAJCL_127 | 0.0 | 1.0 | 0.0 |
| PEAPAJCL_128 | 0.0 | 1.0 | 0.0 |
| PEAPAJCL_129 | 0.0 | 1.0 | 0.0 |
| PEAPAJCL_130 | 0.0 | 1.0 | 0.0 |
| PEAPAJCL_131 | 0.0 | 1.0 | 0.0 |
| PEAPAJCL_132 | 1.0 | 0.0 | 1.0 |
| PEAPAJCL_133 | 1.0 | 0.0 | 1.0 |
| PEAPAJCL_134 | 0.0 | 1.0 | 0.0 |
| PEAPAJCL_135 | 0.0 | 1.0 | 0.0 |
| PEAPAJCL_136 | 0.0 | 1.0 | 0.0 |
| PEAPAJCL_137 | 0.0 | 1.0 | 0.0 |
| PEAPAJCL_138 | 0.0 | 1.0 | 0.0 |
| PEAPAJCL_139 | 0.0 | 1.0 | 0.0 |
| PEAPAJCL_140 | 1.0 | 0.0 | 1.0 |
| PEAPAJCL_141 | 0.0 | 1.0 | 0.0 |
| PEAPAJCL_142 | 0.0 | 1.0 | 0.0 |
| PEAPAJCL_143 | 1.0 | 0.0 | 1.0 |
| PEAPAJCL_144 | 1.0 | 0.0 | 1.0 |
| PEAPAJCL_145 | 1.0 | 0.0 | 1.0 |
| PEAPAJCL_146 | 0.0 | 1.0 | 0.0 |
| PEAPAJCL_147 | 0.0 | 1.0 | 0.0 |
| PEAPAJCL_148 | 0.0 | 1.0 | 0.0 |
| PEAPAJCL_149 | 0.0 | 1.0 | 0.0 |
| PEAPAJCL_150 | 0.0 | 1.0 | 0.0 |
| PEAPAJCL_151 | 1.0 | 0.0 | 1.0 |
| PEAPAJCL_152 | 0.0 | 1.0 | 0.0 |
| PEAPAJCL_153 | 0.0 | 1.0 | 0.0 |
| PEAPAJCL_154 | 1.0 | 0.0 | 1.0 |
| PEAPAJCL_155 | 0.0 | 1.0 | 0.0 |
| PEAPAJCL_156 | 0.0 | 1.0 | 0.0 |
| PEAPAJCL_157 | 0.0 | 1.0 | 0.0 |
| PEAPAJCL_158 | 0.0 | 1.0 | 0.0 |
| PEAPAJCL_159 | 1.0 | 0.0 | 1.0 |
| PEAPAJCL_160 | 1.0 | 0.0 | 1.0 |
| PEAPAJCL_161 | 1.0 | 0.0 | 1.0 |
| PEAPAJCL_162 | 0.0 | 1.0 | 0.0 |
| PEAPAJCL_163 | 0.0 | 1.0 | 0.0 |
| PEAPAJCL_164 | 0.0 | 1.0 | 0.0 |
| PEAPAJCL_165 | 1.0 | 0.0 | 1.0 |
| PEAPAJCL_166 | 0.0 | 1.0 | 0.0 |
| PEAPAJCL_167 | 0.0 | 1.0 | 0.0 |
| PEAPAJCL_168 | 0.0 | 1.0 | 0.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| PEAPAJCL_82 | 2490 | 15020 | False | Siphoviridae | VOG4550, VOG0573, VOG0044, VOG6005, VOG4693, VOG7236, VOG0186, VOG1309, VOG0650, VOG5353, VOG0787, VOG5616, VOG0707, VOG9667, VOG6495, VOG4602, VOG6914 |
Phigaro v2.4.0 (Database: Jan. 2024 release)