Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 0 | 0 | 1 | 1.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| No hit found | |||||||
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| NEKBBIJA_141 | 55615 | 56316 | WalR | 8.79e-109 | transcriptional regulatory protein | 80.34 | 99.57 | EPH95667 |
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| NEKBBIJA_169 | 1987 | 3054 | repUS73 | 1068 / 1101 | 95.97 | CP002654 |
| NEKBBIJA_114 | 12817 | 13856 | rep38 | 1042 / 1104 | 88.58 | CP002655 |
| NEKBBIJA_25 | 30 | 954 | repUS64 | 930 / 954 | 85.48 | JN601038 |
| NEKBBIJA_146 | 5362 | 6297 | rep28 | 937 / 936 | 81.64 | CP005948 |
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| NEKBBIJA_1 | 0.0 | 1.0 | 0.0 |
| NEKBBIJA_2 | 0.0 | 1.0 | 0.0 |
| NEKBBIJA_3 | 1.0 | 0.0 | 1.0 |
| NEKBBIJA_4 | 0.0 | 1.0 | 0.0 |
| NEKBBIJA_5 | 0.0 | 1.0 | 0.0 |
| NEKBBIJA_6 | 0.0 | 1.0 | 0.0 |
| NEKBBIJA_7 | 1.0 | 0.0 | 1.0 |
| NEKBBIJA_8 | 1.0 | 0.0 | 1.0 |
| NEKBBIJA_9 | 1.0 | 0.0 | 1.0 |
| NEKBBIJA_10 | 1.0 | 0.0 | 1.0 |
| NEKBBIJA_11 | 1.0 | 0.0 | 1.0 |
| NEKBBIJA_12 | 1.0 | 0.0 | 1.0 |
| NEKBBIJA_13 | 0.0 | 1.0 | 0.0 |
| NEKBBIJA_14 | 0.0 | 1.0 | 0.0 |
| NEKBBIJA_16 | 1.0 | 0.0 | 1.0 |
| NEKBBIJA_17 | 1.0 | 0.0 | 1.0 |
| NEKBBIJA_18 | 1.0 | 0.0 | 1.0 |
| NEKBBIJA_19 | 1.0 | 0.0 | 1.0 |
| NEKBBIJA_20 | 1.0 | 0.0 | 1.0 |
| NEKBBIJA_21 | 1.0 | 0.0 | 1.0 |
| NEKBBIJA_22 | 1.0 | 0.0 | 1.0 |
| NEKBBIJA_23 | 0.0 | 1.0 | 0.0 |
| NEKBBIJA_24 | 0.0 | 1.0 | 0.0 |
| NEKBBIJA_25 | 1.0 | 0.0 | 1.0 |
| NEKBBIJA_26 | 1.0 | 0.0 | 1.0 |
| NEKBBIJA_27 | 1.0 | 0.0 | 1.0 |
| NEKBBIJA_28 | 1.0 | 0.0 | 1.0 |
| NEKBBIJA_29 | 0.0 | 1.0 | 0.0 |
| NEKBBIJA_30 | 1.0 | 0.0 | 1.0 |
| NEKBBIJA_31 | 1.0 | 0.0 | 1.0 |
| NEKBBIJA_32 | 0.0 | 1.0 | 0.0 |
| NEKBBIJA_33 | 1.0 | 0.0 | 1.0 |
| NEKBBIJA_35 | 0.0 | 1.0 | 0.0 |
| NEKBBIJA_36 | 0.0 | 1.0 | 0.0 |
| NEKBBIJA_37 | 1.0 | 0.0 | 1.0 |
| NEKBBIJA_38 | 0.0 | 1.0 | 0.0 |
| NEKBBIJA_39 | 1.0 | 0.0 | 1.0 |
| NEKBBIJA_40 | 1.0 | 0.0 | 1.0 |
| NEKBBIJA_41 | 1.0 | 0.0 | 1.0 |
| NEKBBIJA_42 | 0.0 | 1.0 | 0.0 |
| NEKBBIJA_43 | 1.0 | 0.0 | 1.0 |
| NEKBBIJA_44 | 1.0 | 0.0 | 1.0 |
| NEKBBIJA_45 | 1.0 | 0.0 | 1.0 |
| NEKBBIJA_46 | 0.0 | 1.0 | 0.0 |
| NEKBBIJA_47 | 1.0 | 0.0 | 1.0 |
| NEKBBIJA_48 | 1.0 | 0.0 | 1.0 |
| NEKBBIJA_49 | 0.0 | 1.0 | 0.0 |
| NEKBBIJA_50 | 1.0 | 0.0 | 1.0 |
| NEKBBIJA_51 | 1.0 | 0.0 | 1.0 |
| NEKBBIJA_57 | 0.0 | 1.0 | 0.0 |
| NEKBBIJA_68 | 0.0 | 1.0 | 0.0 |
| NEKBBIJA_79 | 0.0 | 1.0 | 0.0 |
| NEKBBIJA_84 | 1.0 | 0.0 | 1.0 |
| NEKBBIJA_85 | 0.0 | 1.0 | 0.0 |
| NEKBBIJA_86 | 0.0 | 1.0 | 0.0 |
| NEKBBIJA_87 | 0.0 | 1.0 | 0.0 |
| NEKBBIJA_88 | 0.0 | 1.0 | 0.0 |
| NEKBBIJA_89 | 1.0 | 0.0 | 1.0 |
| NEKBBIJA_90 | 0.0 | 1.0 | 0.0 |
| NEKBBIJA_91 | 0.0 | 1.0 | 0.0 |
| NEKBBIJA_92 | 0.0 | 1.0 | 0.0 |
| NEKBBIJA_93 | 0.0 | 1.0 | 0.0 |
| NEKBBIJA_94 | 0.0 | 1.0 | 0.0 |
| NEKBBIJA_95 | 0.0 | 1.0 | 0.0 |
| NEKBBIJA_96 | 0.0 | 1.0 | 0.0 |
| NEKBBIJA_97 | 0.0 | 1.0 | 0.0 |
| NEKBBIJA_98 | 0.0 | 1.0 | 0.0 |
| NEKBBIJA_99 | 0.0 | 1.0 | 0.0 |
| NEKBBIJA_100 | 0.0 | 1.0 | 0.0 |
| NEKBBIJA_101 | 0.0 | 1.0 | 0.0 |
| NEKBBIJA_102 | 0.0 | 1.0 | 0.0 |
| NEKBBIJA_103 | 0.0 | 1.0 | 0.0 |
| NEKBBIJA_104 | 0.0 | 1.0 | 0.0 |
| NEKBBIJA_105 | 0.0 | 1.0 | 0.0 |
| NEKBBIJA_106 | 0.0 | 1.0 | 0.0 |
| NEKBBIJA_107 | 0.0 | 1.0 | 0.0 |
| NEKBBIJA_108 | 0.0 | 1.0 | 0.0 |
| NEKBBIJA_109 | 0.0 | 1.0 | 0.0 |
| NEKBBIJA_110 | 0.0 | 1.0 | 0.0 |
| NEKBBIJA_111 | 0.0 | 1.0 | 0.0 |
| NEKBBIJA_112 | 0.0 | 1.0 | 0.0 |
| NEKBBIJA_113 | 0.0 | 1.0 | 0.0 |
| NEKBBIJA_114 | 1.0 | 0.0 | 1.0 |
| NEKBBIJA_115 | 0.0 | 1.0 | 0.0 |
| NEKBBIJA_116 | 0.0 | 1.0 | 0.0 |
| NEKBBIJA_117 | 0.0 | 1.0 | 0.0 |
| NEKBBIJA_118 | 0.0 | 1.0 | 0.0 |
| NEKBBIJA_119 | 0.0 | 1.0 | 0.0 |
| NEKBBIJA_120 | 0.0 | 1.0 | 0.0 |
| NEKBBIJA_121 | 0.0 | 1.0 | 0.0 |
| NEKBBIJA_122 | 0.0 | 1.0 | 0.0 |
| NEKBBIJA_123 | 0.0 | 1.0 | 0.0 |
| NEKBBIJA_124 | 0.0 | 1.0 | 0.0 |
| NEKBBIJA_125 | 0.0 | 1.0 | 0.0 |
| NEKBBIJA_126 | 1.0 | 0.0 | 1.0 |
| NEKBBIJA_127 | 1.0 | 0.0 | 1.0 |
| NEKBBIJA_128 | 0.0 | 1.0 | 0.0 |
| NEKBBIJA_129 | 0.0 | 1.0 | 0.0 |
| NEKBBIJA_130 | 0.0 | 1.0 | 0.0 |
| NEKBBIJA_131 | 0.0 | 1.0 | 0.0 |
| NEKBBIJA_132 | 0.0 | 1.0 | 0.0 |
| NEKBBIJA_133 | 0.0 | 1.0 | 0.0 |
| NEKBBIJA_134 | 1.0 | 0.0 | 1.0 |
| NEKBBIJA_135 | 1.0 | 0.0 | 1.0 |
| NEKBBIJA_136 | 0.0 | 1.0 | 0.0 |
| NEKBBIJA_137 | 1.0 | 0.0 | 1.0 |
| NEKBBIJA_138 | 0.0 | 1.0 | 0.0 |
| NEKBBIJA_139 | 1.0 | 0.0 | 1.0 |
| NEKBBIJA_140 | 0.0 | 1.0 | 0.0 |
| NEKBBIJA_141 | 0.0 | 1.0 | 0.0 |
| NEKBBIJA_142 | 0.0 | 1.0 | 0.0 |
| NEKBBIJA_143 | 0.0 | 1.0 | 0.0 |
| NEKBBIJA_144 | 0.0 | 1.0 | 0.0 |
| NEKBBIJA_145 | 1.0 | 0.0 | 1.0 |
| NEKBBIJA_146 | 1.0 | 0.0 | 1.0 |
| NEKBBIJA_147 | 0.0 | 1.0 | 0.0 |
| NEKBBIJA_148 | 0.0 | 1.0 | 0.0 |
| NEKBBIJA_149 | 1.0 | 0.0 | 1.0 |
| NEKBBIJA_150 | 1.0 | 0.0 | 1.0 |
| NEKBBIJA_151 | 0.0 | 1.0 | 0.0 |
| NEKBBIJA_152 | 0.0 | 1.0 | 0.0 |
| NEKBBIJA_153 | 0.0 | 1.0 | 0.0 |
| NEKBBIJA_154 | 0.0 | 1.0 | 0.0 |
| NEKBBIJA_155 | 0.0 | 1.0 | 0.0 |
| NEKBBIJA_156 | 0.0 | 1.0 | 0.0 |
| NEKBBIJA_157 | 1.0 | 0.0 | 1.0 |
| NEKBBIJA_158 | 0.0 | 1.0 | 0.0 |
| NEKBBIJA_159 | 1.0 | 0.0 | 1.0 |
| NEKBBIJA_160 | 0.0 | 1.0 | 0.0 |
| NEKBBIJA_161 | 1.0 | 0.0 | 1.0 |
| NEKBBIJA_162 | 0.0 | 1.0 | 0.0 |
| NEKBBIJA_163 | 0.0 | 1.0 | 0.0 |
| NEKBBIJA_164 | 1.0 | 0.0 | 1.0 |
| NEKBBIJA_165 | 1.0 | 0.0 | 1.0 |
| NEKBBIJA_166 | 0.0 | 1.0 | 0.0 |
| NEKBBIJA_167 | 1.0 | 0.0 | 1.0 |
| NEKBBIJA_168 | 0.0 | 1.0 | 0.0 |
| NEKBBIJA_169 | 1.0 | 0.0 | 1.0 |
| NEKBBIJA_170 | 1.0 | 0.0 | 1.0 |
| NEKBBIJA_171 | 1.0 | 0.0 | 1.0 |
| NEKBBIJA_172 | 0.0 | 1.0 | 0.0 |
| NEKBBIJA_173 | 0.0 | 1.0 | 0.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| NEKBBIJA_84 | 6569 | 40639 | False | Myoviridae | VOG6495, VOG0321, VOG0283, VOG0226, VOG0514, VOG8647, VOG0189, VOG0052, VOG0044, VOG1646, VOG0149, VOG0198, VOG0045, VOG0796, VOG10227, VOG0720, VOG4564, VOG4555, VOG1329, VOG1353, VOG1883, VOG1352, VOG4699, VOG1026, VOG6163, VOG1433, VOG1348, VOG0573, VOG4550, VOG4691, VOG4845, VOG2078, VOG0703 |
| NEKBBIJA_89 | 24839 | 37369 | False | Siphoviridae | VOG3685, VOG6914, VOG4602, VOG6495, VOG9667, VOG0707, VOG5616, VOG0787, VOG5353, VOG0650, VOG1309, VOG0186, VOG7236, VOG4693, VOG6005, VOG0044, VOG0573 |
Phigaro v2.4.0 (Database: Jan. 2024 release)