Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 0 | 0 | 1 | 1.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| No hit found | |||||||
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| PLAKBDOM_172 | 9051 | 8350 | WalR | 1.52e-109 | transcriptional regulatory protein | 80.34 | 99.57 | EPH95667 |
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| PLAKBDOM_5 | 2800 | 3729 | rep28 | 930 / 930 | 98.49 | CP003162 |
| PLAKBDOM_161 | 3158 | 4197 | rep38 | 1042 / 1104 | 88.58 | CP002655 |
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| PLAKBDOM_1 | 0.0 | 1.0 | 0.0 |
| PLAKBDOM_2 | 0.0 | 1.0 | 0.0 |
| PLAKBDOM_3 | 0.0 | 1.0 | 0.0 |
| PLAKBDOM_4 | 0.0 | 1.0 | 0.0 |
| PLAKBDOM_5 | 1.0 | 0.0 | 1.0 |
| PLAKBDOM_6 | 0.0 | 1.0 | 0.0 |
| PLAKBDOM_7 | 1.0 | 0.0 | 1.0 |
| PLAKBDOM_8 | 1.0 | 0.0 | 1.0 |
| PLAKBDOM_10 | 1.0 | 0.0 | 1.0 |
| PLAKBDOM_11 | 0.0 | 1.0 | 0.0 |
| PLAKBDOM_12 | 1.0 | 0.0 | 1.0 |
| PLAKBDOM_13 | 0.0 | 1.0 | 0.0 |
| PLAKBDOM_14 | 1.0 | 0.0 | 1.0 |
| PLAKBDOM_15 | 0.0 | 1.0 | 0.0 |
| PLAKBDOM_16 | 1.0 | 0.0 | 1.0 |
| PLAKBDOM_17 | 1.0 | 0.0 | 1.0 |
| PLAKBDOM_18 | 1.0 | 0.0 | 1.0 |
| PLAKBDOM_19 | 1.0 | 0.0 | 1.0 |
| PLAKBDOM_20 | 0.0 | 1.0 | 0.0 |
| PLAKBDOM_21 | 1.0 | 0.0 | 1.0 |
| PLAKBDOM_22 | 1.0 | 0.0 | 1.0 |
| PLAKBDOM_23 | 1.0 | 0.0 | 1.0 |
| PLAKBDOM_24 | 0.0 | 1.0 | 0.0 |
| PLAKBDOM_25 | 1.0 | 0.0 | 1.0 |
| PLAKBDOM_26 | 1.0 | 0.0 | 1.0 |
| PLAKBDOM_27 | 1.0 | 0.0 | 1.0 |
| PLAKBDOM_28 | 0.0 | 1.0 | 0.0 |
| PLAKBDOM_29 | 1.0 | 0.0 | 1.0 |
| PLAKBDOM_31 | 1.0 | 0.0 | 1.0 |
| PLAKBDOM_32 | 0.0 | 1.0 | 0.0 |
| PLAKBDOM_33 | 1.0 | 0.0 | 1.0 |
| PLAKBDOM_34 | 1.0 | 0.0 | 1.0 |
| PLAKBDOM_35 | 0.0 | 1.0 | 0.0 |
| PLAKBDOM_36 | 0.0 | 1.0 | 0.0 |
| PLAKBDOM_37 | 1.0 | 0.0 | 1.0 |
| PLAKBDOM_38 | 1.0 | 0.0 | 1.0 |
| PLAKBDOM_39 | 1.0 | 0.0 | 1.0 |
| PLAKBDOM_40 | 1.0 | 0.0 | 1.0 |
| PLAKBDOM_41 | 1.0 | 0.0 | 1.0 |
| PLAKBDOM_42 | 1.0 | 0.0 | 1.0 |
| PLAKBDOM_43 | 1.0 | 0.0 | 1.0 |
| PLAKBDOM_45 | 1.0 | 0.0 | 1.0 |
| PLAKBDOM_46 | 0.0 | 1.0 | 0.0 |
| PLAKBDOM_47 | 1.0 | 0.0 | 1.0 |
| PLAKBDOM_48 | 1.0 | 0.0 | 1.0 |
| PLAKBDOM_49 | 1.0 | 0.0 | 1.0 |
| PLAKBDOM_50 | 0.0 | 1.0 | 0.0 |
| PLAKBDOM_51 | 1.0 | 0.0 | 1.0 |
| PLAKBDOM_52 | 1.0 | 0.0 | 1.0 |
| PLAKBDOM_53 | 0.0 | 1.0 | 0.0 |
| PLAKBDOM_54 | 1.0 | 0.0 | 1.0 |
| PLAKBDOM_55 | 1.0 | 0.0 | 1.0 |
| PLAKBDOM_56 | 0.0 | 1.0 | 0.0 |
| PLAKBDOM_57 | 1.0 | 0.0 | 1.0 |
| PLAKBDOM_68 | 0.0 | 1.0 | 0.0 |
| PLAKBDOM_79 | 0.0 | 1.0 | 0.0 |
| PLAKBDOM_90 | 1.0 | 0.0 | 1.0 |
| PLAKBDOM_101 | 0.0 | 1.0 | 0.0 |
| PLAKBDOM_112 | 0.0 | 1.0 | 0.0 |
| PLAKBDOM_113 | 0.0 | 1.0 | 0.0 |
| PLAKBDOM_124 | 0.0 | 1.0 | 0.0 |
| PLAKBDOM_129 | 0.0 | 1.0 | 0.0 |
| PLAKBDOM_130 | 1.0 | 0.0 | 1.0 |
| PLAKBDOM_131 | 0.0 | 1.0 | 0.0 |
| PLAKBDOM_132 | 0.0 | 1.0 | 0.0 |
| PLAKBDOM_133 | 0.0 | 1.0 | 0.0 |
| PLAKBDOM_134 | 0.0 | 1.0 | 0.0 |
| PLAKBDOM_135 | 0.0 | 1.0 | 0.0 |
| PLAKBDOM_136 | 0.0 | 1.0 | 0.0 |
| PLAKBDOM_137 | 0.0 | 1.0 | 0.0 |
| PLAKBDOM_138 | 0.0 | 1.0 | 0.0 |
| PLAKBDOM_139 | 0.0 | 1.0 | 0.0 |
| PLAKBDOM_140 | 0.0 | 1.0 | 0.0 |
| PLAKBDOM_141 | 0.0 | 1.0 | 0.0 |
| PLAKBDOM_142 | 0.0 | 1.0 | 0.0 |
| PLAKBDOM_143 | 0.0 | 1.0 | 0.0 |
| PLAKBDOM_144 | 0.0 | 1.0 | 0.0 |
| PLAKBDOM_145 | 0.0 | 1.0 | 0.0 |
| PLAKBDOM_146 | 0.0 | 1.0 | 0.0 |
| PLAKBDOM_147 | 0.0 | 1.0 | 0.0 |
| PLAKBDOM_148 | 0.0 | 1.0 | 0.0 |
| PLAKBDOM_149 | 0.0 | 1.0 | 0.0 |
| PLAKBDOM_150 | 0.0 | 1.0 | 0.0 |
| PLAKBDOM_151 | 0.0 | 1.0 | 0.0 |
| PLAKBDOM_152 | 0.0 | 1.0 | 0.0 |
| PLAKBDOM_153 | 0.0 | 1.0 | 0.0 |
| PLAKBDOM_154 | 0.0 | 1.0 | 0.0 |
| PLAKBDOM_155 | 0.0 | 1.0 | 0.0 |
| PLAKBDOM_156 | 0.0 | 1.0 | 0.0 |
| PLAKBDOM_157 | 0.0 | 1.0 | 0.0 |
| PLAKBDOM_158 | 0.0 | 1.0 | 0.0 |
| PLAKBDOM_159 | 0.0 | 1.0 | 0.0 |
| PLAKBDOM_160 | 0.0 | 1.0 | 0.0 |
| PLAKBDOM_161 | 1.0 | 0.0 | 1.0 |
| PLAKBDOM_162 | 0.0 | 1.0 | 0.0 |
| PLAKBDOM_163 | 0.0 | 1.0 | 0.0 |
| PLAKBDOM_164 | 0.0 | 1.0 | 0.0 |
| PLAKBDOM_165 | 0.0 | 1.0 | 0.0 |
| PLAKBDOM_166 | 0.0 | 1.0 | 0.0 |
| PLAKBDOM_167 | 0.0 | 1.0 | 0.0 |
| PLAKBDOM_168 | 1.0 | 0.0 | 1.0 |
| PLAKBDOM_169 | 0.0 | 1.0 | 0.0 |
| PLAKBDOM_170 | 0.0 | 1.0 | 0.0 |
| PLAKBDOM_171 | 0.0 | 1.0 | 0.0 |
| PLAKBDOM_172 | 0.0 | 1.0 | 0.0 |
| PLAKBDOM_173 | 1.0 | 0.0 | 1.0 |
| PLAKBDOM_174 | 1.0 | 0.0 | 1.0 |
| PLAKBDOM_175 | 0.0 | 1.0 | 0.0 |
| PLAKBDOM_176 | 0.0 | 1.0 | 0.0 |
| PLAKBDOM_177 | 1.0 | 0.0 | 1.0 |
| PLAKBDOM_178 | 0.0 | 1.0 | 0.0 |
| PLAKBDOM_179 | 0.0 | 1.0 | 0.0 |
| PLAKBDOM_180 | 1.0 | 0.0 | 1.0 |
| PLAKBDOM_181 | 0.0 | 1.0 | 0.0 |
| PLAKBDOM_182 | 0.0 | 1.0 | 0.0 |
| PLAKBDOM_183 | 1.0 | 0.0 | 1.0 |
| PLAKBDOM_184 | 0.0 | 1.0 | 0.0 |
| PLAKBDOM_185 | 0.0 | 1.0 | 0.0 |
| PLAKBDOM_186 | 0.0 | 1.0 | 0.0 |
| PLAKBDOM_187 | 0.0 | 1.0 | 0.0 |
| PLAKBDOM_188 | 0.0 | 1.0 | 0.0 |
| PLAKBDOM_189 | 1.0 | 0.0 | 1.0 |
| PLAKBDOM_190 | 1.0 | 0.0 | 1.0 |
| PLAKBDOM_191 | 0.0 | 1.0 | 0.0 |
| PLAKBDOM_192 | 0.0 | 1.0 | 0.0 |
| PLAKBDOM_193 | 1.0 | 0.0 | 1.0 |
| PLAKBDOM_194 | 1.0 | 0.0 | 1.0 |
| PLAKBDOM_195 | 1.0 | 0.0 | 1.0 |
| PLAKBDOM_196 | 0.0 | 1.0 | 0.0 |
| PLAKBDOM_197 | 0.0 | 1.0 | 0.0 |
| PLAKBDOM_198 | 0.0 | 1.0 | 0.0 |
| PLAKBDOM_199 | 1.0 | 0.0 | 1.0 |
| PLAKBDOM_200 | 0.0 | 1.0 | 0.0 |
| PLAKBDOM_201 | 1.0 | 0.0 | 1.0 |
| PLAKBDOM_202 | 0.0 | 1.0 | 0.0 |
| PLAKBDOM_203 | 0.0 | 1.0 | 0.0 |
| PLAKBDOM_204 | 0.0 | 1.0 | 0.0 |
| PLAKBDOM_205 | 0.0 | 1.0 | 0.0 |
| PLAKBDOM_206 | 0.0 | 1.0 | 0.0 |
| PLAKBDOM_207 | 0.0 | 1.0 | 0.0 |
| PLAKBDOM_208 | 1.0 | 0.0 | 1.0 |
| PLAKBDOM_209 | 0.0 | 1.0 | 0.0 |
| PLAKBDOM_210 | 1.0 | 0.0 | 1.0 |
| PLAKBDOM_211 | 0.0 | 1.0 | 0.0 |
| PLAKBDOM_212 | 0.0 | 1.0 | 0.0 |
| PLAKBDOM_213 | 0.0 | 1.0 | 0.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| PLAKBDOM_1 | 124700 | 136731 | False | Siphoviridae | VOG0480, VOG0198, VOG0204, VOG4553, VOG4556, VOG5051, VOG4544, VOG4581, VOG4841, VOG0205 |
| PLAKBDOM_57 | 2801 | 9388 | False | Siphoviridae | VOG0189, VOG8647, VOG0514, VOG0226, VOG0283, VOG0321, VOG6495, VOG5052, VOG4552 |
| PLAKBDOM_57 | 16988 | 38968 | True | Myoviridae | VOG4357, VOG1637, VOG0703, VOG10636, VOG4845, VOG4691, VOG4550, VOG0573, VOG1348, VOG1026, VOG4357, VOG1433, VOG6163, VOG4699, VOG1352, VOG1883, VOG1353, VOG1329 |
| PLAKBDOM_90 | 2490 | 15086 | False | Siphoviridae | VOG4550, VOG0573, VOG0044, VOG6005, VOG4693, VOG7236, VOG0186, VOG1309, VOG0650, VOG5353, VOG0787, VOG5616, VOG0707, VOG9667, VOG6495, VOG4602, VOG6914 |
Phigaro v2.4.0 (Database: Jan. 2024 release)