Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 0 | 0 | 1 | 1.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| No hit found | |||||||
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| EBJHDPJD_35 | 38548 | 39249 | WalR | 6.45e-109 | transcriptional regulatory protein | 80.34 | 99.57 | EPH95667 |
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| EBJHDPJD_208 | 822 | 1757 | rep28 | 936 / 936 | 99.68 | CP005948 |
| EBJHDPJD_156 | 13743 | 14782 | rep38 | 1042 / 1104 | 88.58 | CP002655 |
| EBJHDPJD_43 | 186 | 684 | repUS54 | 500 / 690 | 85.00 | EU185047 |
| EBJHDPJD_203 | 1 | 956 | repUS64 | 959 / 954 | 81.13 | JN601038 |
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| EBJHDPJD_1 | 0.0 | 1.0 | 0.0 |
| EBJHDPJD_2 | 0.0 | 1.0 | 0.0 |
| EBJHDPJD_3 | 1.0 | 0.0 | 1.0 |
| EBJHDPJD_4 | 1.0 | 0.0 | 1.0 |
| EBJHDPJD_5 | 0.0 | 1.0 | 0.0 |
| EBJHDPJD_6 | 0.0 | 1.0 | 0.0 |
| EBJHDPJD_7 | 0.0 | 1.0 | 0.0 |
| EBJHDPJD_8 | 1.0 | 0.0 | 1.0 |
| EBJHDPJD_9 | 0.0 | 1.0 | 0.0 |
| EBJHDPJD_10 | 0.0 | 1.0 | 0.0 |
| EBJHDPJD_11 | 0.0 | 1.0 | 0.0 |
| EBJHDPJD_12 | 1.0 | 0.0 | 1.0 |
| EBJHDPJD_13 | 0.0 | 1.0 | 0.0 |
| EBJHDPJD_14 | 1.0 | 0.0 | 1.0 |
| EBJHDPJD_15 | 0.0 | 1.0 | 0.0 |
| EBJHDPJD_16 | 0.0 | 1.0 | 0.0 |
| EBJHDPJD_17 | 0.0 | 1.0 | 0.0 |
| EBJHDPJD_18 | 0.0 | 1.0 | 0.0 |
| EBJHDPJD_19 | 0.0 | 1.0 | 0.0 |
| EBJHDPJD_20 | 0.0 | 1.0 | 0.0 |
| EBJHDPJD_21 | 1.0 | 0.0 | 1.0 |
| EBJHDPJD_22 | 1.0 | 0.0 | 1.0 |
| EBJHDPJD_23 | 0.0 | 1.0 | 0.0 |
| EBJHDPJD_24 | 0.0 | 1.0 | 0.0 |
| EBJHDPJD_25 | 1.0 | 0.0 | 1.0 |
| EBJHDPJD_26 | 1.0 | 0.0 | 1.0 |
| EBJHDPJD_28 | 0.0 | 1.0 | 0.0 |
| EBJHDPJD_29 | 1.0 | 0.0 | 1.0 |
| EBJHDPJD_30 | 1.0 | 0.0 | 1.0 |
| EBJHDPJD_31 | 1.0 | 0.0 | 1.0 |
| EBJHDPJD_32 | 1.0 | 0.0 | 1.0 |
| EBJHDPJD_33 | 0.0 | 1.0 | 0.0 |
| EBJHDPJD_34 | 1.0 | 0.0 | 1.0 |
| EBJHDPJD_35 | 0.0 | 1.0 | 0.0 |
| EBJHDPJD_36 | 1.0 | 0.0 | 1.0 |
| EBJHDPJD_37 | 0.0 | 1.0 | 0.0 |
| EBJHDPJD_38 | 0.0 | 1.0 | 0.0 |
| EBJHDPJD_39 | 1.0 | 0.0 | 1.0 |
| EBJHDPJD_40 | 1.0 | 0.0 | 1.0 |
| EBJHDPJD_41 | 1.0 | 0.0 | 1.0 |
| EBJHDPJD_42 | 0.0 | 1.0 | 0.0 |
| EBJHDPJD_43 | 1.0 | 0.0 | 1.0 |
| EBJHDPJD_45 | 0.0 | 1.0 | 0.0 |
| EBJHDPJD_46 | 0.0 | 1.0 | 0.0 |
| EBJHDPJD_47 | 1.0 | 0.0 | 1.0 |
| EBJHDPJD_48 | 1.0 | 0.0 | 1.0 |
| EBJHDPJD_49 | 0.0 | 1.0 | 0.0 |
| EBJHDPJD_50 | 1.0 | 0.0 | 1.0 |
| EBJHDPJD_51 | 1.0 | 0.0 | 1.0 |
| EBJHDPJD_52 | 1.0 | 0.0 | 1.0 |
| EBJHDPJD_53 | 1.0 | 0.0 | 1.0 |
| EBJHDPJD_54 | 1.0 | 0.0 | 1.0 |
| EBJHDPJD_55 | 1.0 | 0.0 | 1.0 |
| EBJHDPJD_56 | 1.0 | 0.0 | 1.0 |
| EBJHDPJD_57 | 1.0 | 0.0 | 1.0 |
| EBJHDPJD_58 | 0.0 | 1.0 | 0.0 |
| EBJHDPJD_59 | 1.0 | 0.0 | 1.0 |
| EBJHDPJD_60 | 1.0 | 0.0 | 1.0 |
| EBJHDPJD_61 | 1.0 | 0.0 | 1.0 |
| EBJHDPJD_62 | 1.0 | 0.0 | 1.0 |
| EBJHDPJD_63 | 0.0 | 1.0 | 0.0 |
| EBJHDPJD_68 | 0.0 | 1.0 | 0.0 |
| EBJHDPJD_79 | 0.0 | 1.0 | 0.0 |
| EBJHDPJD_90 | 1.0 | 0.0 | 1.0 |
| EBJHDPJD_101 | 0.0 | 1.0 | 0.0 |
| EBJHDPJD_112 | 0.0 | 1.0 | 0.0 |
| EBJHDPJD_113 | 0.0 | 1.0 | 0.0 |
| EBJHDPJD_124 | 0.0 | 1.0 | 0.0 |
| EBJHDPJD_127 | 0.0 | 1.0 | 0.0 |
| EBJHDPJD_128 | 0.0 | 1.0 | 0.0 |
| EBJHDPJD_129 | 0.0 | 1.0 | 0.0 |
| EBJHDPJD_130 | 0.0 | 1.0 | 0.0 |
| EBJHDPJD_131 | 0.0 | 1.0 | 0.0 |
| EBJHDPJD_132 | 0.0 | 1.0 | 0.0 |
| EBJHDPJD_133 | 0.0 | 1.0 | 0.0 |
| EBJHDPJD_134 | 0.0 | 1.0 | 0.0 |
| EBJHDPJD_135 | 0.0 | 1.0 | 0.0 |
| EBJHDPJD_136 | 0.0 | 1.0 | 0.0 |
| EBJHDPJD_137 | 0.0 | 1.0 | 0.0 |
| EBJHDPJD_138 | 0.0 | 1.0 | 0.0 |
| EBJHDPJD_139 | 0.0 | 1.0 | 0.0 |
| EBJHDPJD_140 | 0.0 | 1.0 | 0.0 |
| EBJHDPJD_141 | 0.0 | 1.0 | 0.0 |
| EBJHDPJD_142 | 0.0 | 1.0 | 0.0 |
| EBJHDPJD_143 | 0.0 | 1.0 | 0.0 |
| EBJHDPJD_144 | 0.0 | 1.0 | 0.0 |
| EBJHDPJD_145 | 0.0 | 1.0 | 0.0 |
| EBJHDPJD_146 | 0.0 | 1.0 | 0.0 |
| EBJHDPJD_147 | 0.0 | 1.0 | 0.0 |
| EBJHDPJD_148 | 0.0 | 1.0 | 0.0 |
| EBJHDPJD_149 | 0.0 | 1.0 | 0.0 |
| EBJHDPJD_150 | 0.0 | 1.0 | 0.0 |
| EBJHDPJD_151 | 0.0 | 1.0 | 0.0 |
| EBJHDPJD_152 | 0.0 | 1.0 | 0.0 |
| EBJHDPJD_153 | 1.0 | 0.0 | 1.0 |
| EBJHDPJD_154 | 0.0 | 1.0 | 0.0 |
| EBJHDPJD_155 | 0.0 | 1.0 | 0.0 |
| EBJHDPJD_156 | 1.0 | 0.0 | 1.0 |
| EBJHDPJD_157 | 0.0 | 1.0 | 0.0 |
| EBJHDPJD_158 | 0.0 | 1.0 | 0.0 |
| EBJHDPJD_159 | 0.0 | 1.0 | 0.0 |
| EBJHDPJD_160 | 0.0 | 1.0 | 0.0 |
| EBJHDPJD_161 | 1.0 | 0.0 | 1.0 |
| EBJHDPJD_162 | 0.0 | 1.0 | 0.0 |
| EBJHDPJD_163 | 0.0 | 1.0 | 0.0 |
| EBJHDPJD_164 | 0.0 | 1.0 | 0.0 |
| EBJHDPJD_165 | 0.0 | 1.0 | 0.0 |
| EBJHDPJD_166 | 1.0 | 0.0 | 1.0 |
| EBJHDPJD_167 | 0.0 | 1.0 | 0.0 |
| EBJHDPJD_168 | 0.0 | 1.0 | 0.0 |
| EBJHDPJD_169 | 0.0 | 1.0 | 0.0 |
| EBJHDPJD_170 | 0.0 | 1.0 | 0.0 |
| EBJHDPJD_171 | 1.0 | 0.0 | 1.0 |
| EBJHDPJD_172 | 1.0 | 0.0 | 1.0 |
| EBJHDPJD_173 | 0.0 | 1.0 | 0.0 |
| EBJHDPJD_174 | 1.0 | 0.0 | 1.0 |
| EBJHDPJD_175 | 0.0 | 1.0 | 0.0 |
| EBJHDPJD_176 | 0.0 | 1.0 | 0.0 |
| EBJHDPJD_177 | 0.0 | 1.0 | 0.0 |
| EBJHDPJD_178 | 0.0 | 1.0 | 0.0 |
| EBJHDPJD_179 | 0.0 | 1.0 | 0.0 |
| EBJHDPJD_180 | 1.0 | 0.0 | 1.0 |
| EBJHDPJD_181 | 0.0 | 1.0 | 0.0 |
| EBJHDPJD_182 | 1.0 | 0.0 | 1.0 |
| EBJHDPJD_183 | 1.0 | 0.0 | 1.0 |
| EBJHDPJD_184 | 0.0 | 1.0 | 0.0 |
| EBJHDPJD_185 | 0.0 | 1.0 | 0.0 |
| EBJHDPJD_186 | 0.0 | 1.0 | 0.0 |
| EBJHDPJD_187 | 1.0 | 0.0 | 1.0 |
| EBJHDPJD_188 | 0.0 | 1.0 | 0.0 |
| EBJHDPJD_189 | 0.0 | 1.0 | 0.0 |
| EBJHDPJD_190 | 0.0 | 1.0 | 0.0 |
| EBJHDPJD_191 | 1.0 | 0.0 | 1.0 |
| EBJHDPJD_192 | 0.0 | 1.0 | 0.0 |
| EBJHDPJD_193 | 1.0 | 0.0 | 1.0 |
| EBJHDPJD_194 | 0.0 | 1.0 | 0.0 |
| EBJHDPJD_195 | 0.0 | 1.0 | 0.0 |
| EBJHDPJD_196 | 1.0 | 0.0 | 1.0 |
| EBJHDPJD_197 | 1.0 | 0.0 | 1.0 |
| EBJHDPJD_198 | 1.0 | 0.0 | 1.0 |
| EBJHDPJD_199 | 0.0 | 1.0 | 0.0 |
| EBJHDPJD_200 | 0.0 | 1.0 | 0.0 |
| EBJHDPJD_201 | 0.0 | 1.0 | 0.0 |
| EBJHDPJD_202 | 1.0 | 0.0 | 1.0 |
| EBJHDPJD_203 | 1.0 | 0.0 | 1.0 |
| EBJHDPJD_204 | 1.0 | 0.0 | 1.0 |
| EBJHDPJD_205 | 0.0 | 1.0 | 0.0 |
| EBJHDPJD_206 | 0.0 | 1.0 | 0.0 |
| EBJHDPJD_207 | 0.0 | 1.0 | 0.0 |
| EBJHDPJD_208 | 1.0 | 0.0 | 1.0 |
| EBJHDPJD_209 | 0.0 | 1.0 | 0.0 |
| EBJHDPJD_210 | 1.0 | 0.0 | 1.0 |
| EBJHDPJD_211 | 0.0 | 1.0 | 0.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| EBJHDPJD_57 | 11519 | 42339 | False | Myoviridae | VOG4845, VOG4691, VOG4691, VOG4550, VOG0573, VOG1348, VOG1433, VOG4910, VOG6684, VOG4699, VOG1352, VOG1883, VOG1353, VOG1329, VOG4555, VOG4564, VOG0720, VOG10227, VOG0796, VOG4944, VOG0045, VOG0198, VOG0149, VOG3643, VOG0044, VOG4567, VOG0052, VOG0189, VOG8647, VOG0514 |
| EBJHDPJD_90 | 24839 | 37037 | False | Siphoviridae | VOG3685, VOG6914, VOG4602, VOG6495, VOG9667, VOG0707, VOG5616, VOG0787, VOG5353, VOG0650, VOG1309, VOG0186, VOG7236, VOG4693, VOG6005, VOG0044 |
Phigaro v2.4.0 (Database: Jan. 2024 release)