Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 0 | 0 | 1 | 1.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| No hit found | |||||||
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| IFAGHFOK_35 | 24292 | 22712 | GroEL | 0.0 | folding of newly synthesized proteins, preventing misfolding and aggregation | 80.64 | 96.70 | BAA04222 |
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| No hit found | ||||||
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| IFAGHFOK_1 | 0.0 | 1.0 | 0.0 |
| IFAGHFOK_2 | 0.0 | 1.0 | 0.0 |
| IFAGHFOK_3 | 0.0 | 1.0 | 0.0 |
| IFAGHFOK_4 | 0.0 | 1.0 | 0.0 |
| IFAGHFOK_5 | 0.0 | 1.0 | 0.0 |
| IFAGHFOK_6 | 0.0 | 1.0 | 0.0 |
| IFAGHFOK_7 | 0.0 | 1.0 | 0.0 |
| IFAGHFOK_8 | 0.0 | 1.0 | 0.0 |
| IFAGHFOK_9 | 0.0 | 1.0 | 0.0 |
| IFAGHFOK_10 | 0.0 | 1.0 | 0.0 |
| IFAGHFOK_11 | 0.0 | 1.0 | 0.0 |
| IFAGHFOK_12 | 0.0 | 1.0 | 0.0 |
| IFAGHFOK_13 | 0.0 | 1.0 | 0.0 |
| IFAGHFOK_14 | 0.0 | 1.0 | 0.0 |
| IFAGHFOK_15 | 0.0 | 1.0 | 0.0 |
| IFAGHFOK_16 | 0.0 | 1.0 | 0.0 |
| IFAGHFOK_17 | 0.0 | 1.0 | 0.0 |
| IFAGHFOK_18 | 0.0 | 1.0 | 0.0 |
| IFAGHFOK_19 | 0.0 | 1.0 | 0.0 |
| IFAGHFOK_20 | 0.0 | 1.0 | 0.0 |
| IFAGHFOK_21 | 0.0 | 1.0 | 0.0 |
| IFAGHFOK_22 | 0.0 | 1.0 | 0.0 |
| IFAGHFOK_23 | 0.0 | 1.0 | 0.0 |
| IFAGHFOK_24 | 0.0 | 1.0 | 0.0 |
| IFAGHFOK_25 | 0.0 | 1.0 | 0.0 |
| IFAGHFOK_26 | 0.0 | 1.0 | 0.0 |
| IFAGHFOK_27 | 0.0 | 1.0 | 0.0 |
| IFAGHFOK_28 | 0.0 | 1.0 | 0.0 |
| IFAGHFOK_29 | 0.0 | 1.0 | 0.0 |
| IFAGHFOK_30 | 0.0 | 1.0 | 0.0 |
| IFAGHFOK_31 | 0.0 | 1.0 | 0.0 |
| IFAGHFOK_32 | 0.0 | 1.0 | 0.0 |
| IFAGHFOK_33 | 0.0 | 1.0 | 0.0 |
| IFAGHFOK_34 | 0.0 | 1.0 | 0.0 |
| IFAGHFOK_35 | 0.0 | 1.0 | 0.0 |
| IFAGHFOK_36 | 0.0 | 1.0 | 0.0 |
| IFAGHFOK_37 | 0.0 | 1.0 | 0.0 |
| IFAGHFOK_38 | 1.0 | 0.0 | 1.0 |
| IFAGHFOK_39 | 1.0 | 0.0 | 1.0 |
| IFAGHFOK_40 | 0.0 | 1.0 | 0.0 |
| IFAGHFOK_41 | 0.0 | 1.0 | 0.0 |
| IFAGHFOK_42 | 0.0 | 1.0 | 0.0 |
| IFAGHFOK_43 | 1.0 | 0.0 | 1.0 |
| IFAGHFOK_44 | 0.0 | 1.0 | 0.0 |
| IFAGHFOK_45 | 0.0 | 1.0 | 0.0 |
| IFAGHFOK_46 | 0.0 | 1.0 | 0.0 |
| IFAGHFOK_47 | 0.0 | 1.0 | 0.0 |
| IFAGHFOK_48 | 1.0 | 0.0 | 1.0 |
| IFAGHFOK_49 | 0.0 | 1.0 | 0.0 |
| IFAGHFOK_50 | 0.0 | 1.0 | 0.0 |
| IFAGHFOK_51 | 0.0 | 1.0 | 0.0 |
| IFAGHFOK_52 | 1.0 | 0.0 | 1.0 |
| IFAGHFOK_53 | 1.0 | 0.0 | 1.0 |
| IFAGHFOK_54 | 0.0 | 1.0 | 0.0 |
| IFAGHFOK_55 | 0.0 | 1.0 | 0.0 |
| IFAGHFOK_56 | 0.0 | 1.0 | 0.0 |
| IFAGHFOK_57 | 0.0 | 1.0 | 0.0 |
| IFAGHFOK_58 | 0.0 | 1.0 | 0.0 |
| IFAGHFOK_59 | 1.0 | 0.0 | 1.0 |
| IFAGHFOK_60 | 0.0 | 1.0 | 0.0 |
| IFAGHFOK_61 | 0.0 | 1.0 | 0.0 |
| IFAGHFOK_62 | 0.0 | 1.0 | 0.0 |
| IFAGHFOK_63 | 1.0 | 0.0 | 1.0 |
| IFAGHFOK_64 | 0.0 | 1.0 | 0.0 |
| IFAGHFOK_65 | 1.0 | 0.0 | 1.0 |
| IFAGHFOK_66 | 1.0 | 0.0 | 1.0 |
| IFAGHFOK_67 | 0.0 | 1.0 | 0.0 |
| IFAGHFOK_68 | 1.0 | 0.0 | 1.0 |
| IFAGHFOK_69 | 0.0 | 1.0 | 0.0 |
| IFAGHFOK_70 | 1.0 | 0.0 | 1.0 |
| IFAGHFOK_71 | 1.0 | 0.0 | 1.0 |
| IFAGHFOK_72 | 0.0 | 1.0 | 0.0 |
| IFAGHFOK_73 | 1.0 | 0.0 | 1.0 |
| IFAGHFOK_74 | 1.0 | 0.0 | 1.0 |
| IFAGHFOK_75 | 1.0 | 0.0 | 1.0 |
| IFAGHFOK_76 | 1.0 | 0.0 | 1.0 |
| IFAGHFOK_77 | 0.0 | 1.0 | 0.0 |
| IFAGHFOK_78 | 0.0 | 1.0 | 0.0 |
| IFAGHFOK_79 | 1.0 | 0.0 | 1.0 |
| IFAGHFOK_80 | 1.0 | 0.0 | 1.0 |
| IFAGHFOK_81 | 0.0 | 1.0 | 0.0 |
| IFAGHFOK_82 | 1.0 | 0.0 | 1.0 |
| IFAGHFOK_83 | 1.0 | 0.0 | 1.0 |
| IFAGHFOK_89 | 0.0 | 1.0 | 0.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| IFAGHFOK_1 | 179628 | 194828 | False | Unknown | VOG0572, |
| IFAGHFOK_1 | 304657 | 311275 | False | Myoviridae | VOG0982, |
| IFAGHFOK_43 | 12051 | 20399 | False | Siphoviridae | VOG4751, |
| IFAGHFOK_45 | 110717 | 122708 | False | Unknown | VOG0572, |
Phigaro v2.4.0 (Database: Jan. 2024 release)