Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 1 | 0 | 0 | 1.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| NOMNIANF_13 | 60570 | 61370 | ErmF | ARO:3000498 | ErmF | 99.25 | 100.00 | M17124.1 |
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| NOMNIANF_13 | 60570 | 61370 | erm(F) | Erythromycin, Lincomycin, Clindamycin, Quinupristin, Pristinamycin IA, Virginiamycin S | 99.88 | 100.00 | M17808 |
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| NOMNIANF_13 | 60570 | 61367 | erm(F) | 23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(F) | BLASTX | 99.62 | 100.00 | WP_002682030.1 |
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| No hit found | ||||||
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| NOMNIANF_1 | 0.0 | 1.0 | 0.0 |
| NOMNIANF_2 | 0.0 | 1.0 | 0.0 |
| NOMNIANF_13 | 0.0 | 1.0 | 0.0 |
| NOMNIANF_24 | 0.0 | 1.0 | 0.0 |
| NOMNIANF_35 | 0.0 | 1.0 | 0.0 |
| NOMNIANF_46 | 0.0 | 1.0 | 0.0 |
| NOMNIANF_57 | 0.0 | 1.0 | 0.0 |
| NOMNIANF_68 | 0.0 | 1.0 | 0.0 |
| NOMNIANF_76 | 0.0 | 1.0 | 0.0 |
| NOMNIANF_77 | 0.0 | 1.0 | 0.0 |
| NOMNIANF_78 | 0.0 | 1.0 | 0.0 |
| NOMNIANF_79 | 0.0 | 1.0 | 0.0 |
| NOMNIANF_80 | 0.0 | 1.0 | 0.0 |
| NOMNIANF_81 | 0.0 | 1.0 | 0.0 |
| NOMNIANF_82 | 0.0 | 1.0 | 0.0 |
| NOMNIANF_83 | 0.0 | 1.0 | 0.0 |
| NOMNIANF_84 | 0.0 | 1.0 | 0.0 |
| NOMNIANF_85 | 0.0 | 1.0 | 0.0 |
| NOMNIANF_86 | 0.0 | 1.0 | 0.0 |
| NOMNIANF_87 | 0.0 | 1.0 | 0.0 |
| NOMNIANF_88 | 0.0 | 1.0 | 0.0 |
| NOMNIANF_89 | 0.0 | 1.0 | 0.0 |
| NOMNIANF_90 | 0.0 | 1.0 | 0.0 |
| NOMNIANF_91 | 0.0 | 1.0 | 0.0 |
| NOMNIANF_92 | 0.0 | 1.0 | 0.0 |
| NOMNIANF_93 | 0.0 | 1.0 | 0.0 |
| NOMNIANF_94 | 0.0 | 1.0 | 0.0 |
| NOMNIANF_95 | 0.0 | 1.0 | 0.0 |
| NOMNIANF_96 | 0.0 | 1.0 | 0.0 |
| NOMNIANF_97 | 0.0 | 1.0 | 0.0 |
| NOMNIANF_98 | 0.0 | 1.0 | 0.0 |
| NOMNIANF_99 | 0.0 | 1.0 | 0.0 |
| NOMNIANF_100 | 1.0 | 0.0 | 1.0 |
| NOMNIANF_101 | 0.0 | 1.0 | 0.0 |
| NOMNIANF_102 | 0.0 | 1.0 | 0.0 |
| NOMNIANF_103 | 0.0 | 1.0 | 0.0 |
| NOMNIANF_104 | 0.0 | 1.0 | 0.0 |
| NOMNIANF_105 | 1.0 | 0.0 | 1.0 |
| NOMNIANF_106 | 0.0 | 1.0 | 0.0 |
| NOMNIANF_107 | 1.0 | 0.0 | 1.0 |
| NOMNIANF_108 | 0.0 | 1.0 | 0.0 |
| NOMNIANF_109 | 0.0 | 1.0 | 0.0 |
| NOMNIANF_110 | 1.0 | 0.0 | 1.0 |
| NOMNIANF_111 | 0.0 | 1.0 | 0.0 |
| NOMNIANF_112 | 0.0 | 1.0 | 0.0 |
| NOMNIANF_113 | 1.0 | 0.0 | 1.0 |
| NOMNIANF_115 | 0.0 | 1.0 | 0.0 |
| NOMNIANF_116 | 1.0 | 0.0 | 1.0 |
| NOMNIANF_117 | 1.0 | 0.0 | 1.0 |
| NOMNIANF_118 | 0.0 | 1.0 | 0.0 |
| NOMNIANF_119 | 0.0 | 1.0 | 0.0 |
| NOMNIANF_120 | 1.0 | 0.0 | 1.0 |
| NOMNIANF_121 | 1.0 | 0.0 | 1.0 |
| NOMNIANF_122 | 1.0 | 0.0 | 1.0 |
| NOMNIANF_123 | 0.0 | 1.0 | 0.0 |
| NOMNIANF_124 | 0.0 | 1.0 | 0.0 |
| NOMNIANF_125 | 0.0 | 1.0 | 0.0 |
| NOMNIANF_126 | 0.0 | 1.0 | 0.0 |
| NOMNIANF_127 | 0.0 | 1.0 | 0.0 |
| NOMNIANF_128 | 0.0 | 1.0 | 0.0 |
| NOMNIANF_129 | 0.0 | 1.0 | 0.0 |
| NOMNIANF_130 | 1.0 | 0.0 | 1.0 |
| NOMNIANF_131 | 1.0 | 0.0 | 1.0 |
| NOMNIANF_132 | 0.0 | 1.0 | 0.0 |
| NOMNIANF_133 | 1.0 | 0.0 | 1.0 |
| NOMNIANF_134 | 0.0 | 1.0 | 0.0 |
| NOMNIANF_135 | 0.0 | 1.0 | 0.0 |
| NOMNIANF_136 | 0.0 | 1.0 | 0.0 |
| NOMNIANF_137 | 1.0 | 0.0 | 1.0 |
| NOMNIANF_138 | 0.0 | 1.0 | 0.0 |
| NOMNIANF_139 | 1.0 | 0.0 | 1.0 |
| NOMNIANF_140 | 0.0 | 1.0 | 0.0 |
| NOMNIANF_141 | 0.0 | 1.0 | 0.0 |
| NOMNIANF_142 | 0.0 | 1.0 | 0.0 |
| NOMNIANF_143 | 0.0 | 1.0 | 0.0 |
| NOMNIANF_144 | 0.0 | 1.0 | 0.0 |
| NOMNIANF_145 | 0.0 | 1.0 | 0.0 |
| NOMNIANF_146 | 0.0 | 1.0 | 0.0 |
| NOMNIANF_147 | 0.0 | 1.0 | 0.0 |
| NOMNIANF_148 | 0.0 | 1.0 | 0.0 |
| NOMNIANF_149 | 0.0 | 1.0 | 0.0 |
| NOMNIANF_150 | 0.0 | 1.0 | 0.0 |
| NOMNIANF_151 | 0.0 | 1.0 | 0.0 |
| NOMNIANF_152 | 0.0 | 1.0 | 0.0 |
| NOMNIANF_153 | 0.0 | 1.0 | 0.0 |
| NOMNIANF_154 | 0.0 | 1.0 | 0.0 |
| NOMNIANF_155 | 0.0 | 1.0 | 0.0 |
| NOMNIANF_156 | 0.0 | 1.0 | 0.0 |
| NOMNIANF_157 | 0.0 | 1.0 | 0.0 |
| NOMNIANF_158 | 0.0 | 1.0 | 0.0 |
| NOMNIANF_159 | 0.0 | 1.0 | 0.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| NOMNIANF_134 | 75145 | 83330 | False | Unknown | VOG4573, |
Phigaro v2.4.0 (Database: Jan. 2024 release)