Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 1 | 0 | 0 | 1.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| OBFLLCMG_85 | 2854 | 3819 | CfxA3 | ARO:3003003 | CfxA3 | 100.00 | 100.00 | AF472622.2 |
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| OBFLLCMG_85 | 2854 | 3819 | cfxA3 | Ampicillin | 100.00 | 100.00 | AF472622 |
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| OBFLLCMG_85 | 2854 | 3816 | cfxA3 | extended-spectrum class A beta-lactamase CfxA3 | EXACTX | 100.00 | 100.00 | WP_004348227.1 |
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| No hit found | ||||||
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| OBFLLCMG_1 | 0.0 | 1.0 | 0.0 |
| OBFLLCMG_2 | 0.0 | 1.0 | 0.0 |
| OBFLLCMG_13 | 0.0 | 1.0 | 0.0 |
| OBFLLCMG_24 | 0.0 | 1.0 | 0.0 |
| OBFLLCMG_35 | 0.0 | 1.0 | 0.0 |
| OBFLLCMG_36 | 0.0 | 1.0 | 0.0 |
| OBFLLCMG_37 | 0.0 | 1.0 | 0.0 |
| OBFLLCMG_38 | 0.0 | 1.0 | 0.0 |
| OBFLLCMG_39 | 0.0 | 1.0 | 0.0 |
| OBFLLCMG_40 | 0.0 | 1.0 | 0.0 |
| OBFLLCMG_41 | 0.0 | 1.0 | 0.0 |
| OBFLLCMG_42 | 0.0 | 1.0 | 0.0 |
| OBFLLCMG_43 | 0.0 | 1.0 | 0.0 |
| OBFLLCMG_44 | 0.0 | 1.0 | 0.0 |
| OBFLLCMG_45 | 0.0 | 1.0 | 0.0 |
| OBFLLCMG_46 | 0.0 | 1.0 | 0.0 |
| OBFLLCMG_47 | 0.0 | 1.0 | 0.0 |
| OBFLLCMG_48 | 0.0 | 1.0 | 0.0 |
| OBFLLCMG_49 | 0.0 | 1.0 | 0.0 |
| OBFLLCMG_50 | 0.0 | 1.0 | 0.0 |
| OBFLLCMG_51 | 0.0 | 1.0 | 0.0 |
| OBFLLCMG_52 | 0.0 | 1.0 | 0.0 |
| OBFLLCMG_53 | 0.0 | 1.0 | 0.0 |
| OBFLLCMG_54 | 0.0 | 1.0 | 0.0 |
| OBFLLCMG_55 | 0.0 | 1.0 | 0.0 |
| OBFLLCMG_56 | 0.0 | 1.0 | 0.0 |
| OBFLLCMG_57 | 0.0 | 1.0 | 0.0 |
| OBFLLCMG_58 | 0.0 | 1.0 | 0.0 |
| OBFLLCMG_59 | 0.0 | 1.0 | 0.0 |
| OBFLLCMG_60 | 0.0 | 1.0 | 0.0 |
| OBFLLCMG_61 | 0.0 | 1.0 | 0.0 |
| OBFLLCMG_62 | 0.0 | 1.0 | 0.0 |
| OBFLLCMG_63 | 0.0 | 1.0 | 0.0 |
| OBFLLCMG_64 | 0.0 | 1.0 | 0.0 |
| OBFLLCMG_65 | 0.0 | 1.0 | 0.0 |
| OBFLLCMG_66 | 0.0 | 1.0 | 0.0 |
| OBFLLCMG_67 | 0.0 | 1.0 | 0.0 |
| OBFLLCMG_68 | 0.0 | 1.0 | 0.0 |
| OBFLLCMG_69 | 0.0 | 1.0 | 0.0 |
| OBFLLCMG_70 | 0.0 | 1.0 | 0.0 |
| OBFLLCMG_71 | 0.0 | 1.0 | 0.0 |
| OBFLLCMG_72 | 0.0 | 1.0 | 0.0 |
| OBFLLCMG_73 | 0.0 | 1.0 | 0.0 |
| OBFLLCMG_74 | 0.0 | 1.0 | 0.0 |
| OBFLLCMG_75 | 0.0 | 1.0 | 0.0 |
| OBFLLCMG_76 | 0.0 | 1.0 | 0.0 |
| OBFLLCMG_77 | 0.0 | 1.0 | 0.0 |
| OBFLLCMG_78 | 0.0 | 1.0 | 0.0 |
| OBFLLCMG_79 | 0.0 | 1.0 | 0.0 |
| OBFLLCMG_80 | 0.0 | 1.0 | 0.0 |
| OBFLLCMG_81 | 0.0 | 1.0 | 0.0 |
| OBFLLCMG_82 | 1.0 | 0.0 | 1.0 |
| OBFLLCMG_83 | 0.0 | 1.0 | 0.0 |
| OBFLLCMG_84 | 0.0 | 1.0 | 0.0 |
| OBFLLCMG_85 | 0.0 | 1.0 | 0.0 |
| OBFLLCMG_86 | 0.0 | 1.0 | 0.0 |
| OBFLLCMG_87 | 1.0 | 0.0 | 1.0 |
| OBFLLCMG_88 | 0.0 | 1.0 | 0.0 |
| OBFLLCMG_89 | 0.0 | 1.0 | 0.0 |
| OBFLLCMG_90 | 0.0 | 1.0 | 0.0 |
| OBFLLCMG_91 | 0.0 | 1.0 | 0.0 |
| OBFLLCMG_92 | 0.0 | 1.0 | 0.0 |
| OBFLLCMG_93 | 0.0 | 1.0 | 0.0 |
| OBFLLCMG_94 | 1.0 | 0.0 | 1.0 |
| OBFLLCMG_95 | 1.0 | 0.0 | 1.0 |
| OBFLLCMG_96 | 0.0 | 1.0 | 0.0 |
| OBFLLCMG_97 | 0.0 | 1.0 | 0.0 |
| OBFLLCMG_98 | 0.0 | 1.0 | 0.0 |
| OBFLLCMG_99 | 0.0 | 1.0 | 0.0 |
| OBFLLCMG_100 | 0.0 | 1.0 | 0.0 |
| OBFLLCMG_101 | 1.0 | 0.0 | 1.0 |
| OBFLLCMG_102 | 0.0 | 1.0 | 0.0 |
| OBFLLCMG_104 | 1.0 | 0.0 | 1.0 |
| OBFLLCMG_105 | 1.0 | 0.0 | 1.0 |
| OBFLLCMG_106 | 1.0 | 0.0 | 1.0 |
| OBFLLCMG_107 | 1.0 | 0.0 | 1.0 |
| OBFLLCMG_108 | 0.0 | 1.0 | 0.0 |
| OBFLLCMG_110 | 0.0 | 1.0 | 0.0 |
| OBFLLCMG_111 | 1.0 | 0.0 | 1.0 |
| OBFLLCMG_112 | 1.0 | 0.0 | 1.0 |
| OBFLLCMG_113 | 1.0 | 0.0 | 1.0 |
| OBFLLCMG_114 | 0.0 | 1.0 | 0.0 |
| OBFLLCMG_115 | 1.0 | 0.0 | 1.0 |
| OBFLLCMG_116 | 1.0 | 0.0 | 1.0 |
| OBFLLCMG_117 | 1.0 | 0.0 | 1.0 |
| OBFLLCMG_119 | 0.0 | 1.0 | 0.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| OBFLLCMG_52 | 49473 | 64571 | False | Siphoviridae | VOG5235, |
| OBFLLCMG_53 | 100678 | 117015 | False | Siphoviridae | VOG4841, |
| OBFLLCMG_86 | 67419 | 75604 | False | Unknown | VOG0572, |
Phigaro v2.4.0 (Database: Jan. 2024 release)