Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 2 | 0 | 0 | 2.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| OHIDOHOF_44 | 27800 | 29725 | tet(Q) | ARO:3000191 | tet(Q) | 96.41 | 97.56 | Z21523.1 |
| OHIDOHOF_77 | 23333 | 24067 | ErmG | ARO:3000522 | ErmG | 99.18 | 100.00 | L42817.1 |
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| OHIDOHOF_44 | 27800 | 29725 | tet(Q) | Doxycycline, Tetracycline, Minocycline | 99.84 | 100.00 | L33696 |
| OHIDOHOF_77 | 23333 | 24067 | erm(G) | Erythromycin, Lincomycin, Clindamycin, Quinupristin, Pristinamycin IA, Virginiamycin S | 99.32 | 100.00 | M15332 |
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| OHIDOHOF_77 | 23336 | 24067 | erm(G) | 23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(G) | BLASTX | 99.59 | 100.00 | WP_063844791.1 |
| OHIDOHOF_44 | 27803 | 29725 | tet(Q) | tetracycline resistance ribosomal protection protein Tet(Q) | BLASTX | 99.53 | 100.00 | WP_063856407.1 |
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| OHIDOHOF_108 | 1 | 644 | repUS2 | 646 / 681 | 99.23 | BFU30316 |
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| OHIDOHOF_1 | 0.0 | 1.0 | 0.0 |
| OHIDOHOF_2 | 0.0 | 1.0 | 0.0 |
| OHIDOHOF_13 | 0.0 | 1.0 | 0.0 |
| OHIDOHOF_24 | 0.0 | 1.0 | 0.0 |
| OHIDOHOF_33 | 0.0 | 1.0 | 0.0 |
| OHIDOHOF_34 | 0.0 | 1.0 | 0.0 |
| OHIDOHOF_35 | 0.0 | 1.0 | 0.0 |
| OHIDOHOF_36 | 0.0 | 1.0 | 0.0 |
| OHIDOHOF_37 | 0.0 | 1.0 | 0.0 |
| OHIDOHOF_38 | 0.0 | 1.0 | 0.0 |
| OHIDOHOF_39 | 0.0 | 1.0 | 0.0 |
| OHIDOHOF_40 | 0.0 | 1.0 | 0.0 |
| OHIDOHOF_41 | 0.0 | 1.0 | 0.0 |
| OHIDOHOF_42 | 0.0 | 1.0 | 0.0 |
| OHIDOHOF_43 | 0.0 | 1.0 | 0.0 |
| OHIDOHOF_44 | 0.0 | 1.0 | 0.0 |
| OHIDOHOF_45 | 0.0 | 1.0 | 0.0 |
| OHIDOHOF_46 | 0.0 | 1.0 | 0.0 |
| OHIDOHOF_47 | 0.0 | 1.0 | 0.0 |
| OHIDOHOF_48 | 0.0 | 1.0 | 0.0 |
| OHIDOHOF_49 | 0.0 | 1.0 | 0.0 |
| OHIDOHOF_50 | 0.0 | 1.0 | 0.0 |
| OHIDOHOF_51 | 0.0 | 1.0 | 0.0 |
| OHIDOHOF_52 | 0.0 | 1.0 | 0.0 |
| OHIDOHOF_53 | 0.0 | 1.0 | 0.0 |
| OHIDOHOF_54 | 0.0 | 1.0 | 0.0 |
| OHIDOHOF_55 | 0.0 | 1.0 | 0.0 |
| OHIDOHOF_56 | 0.0 | 1.0 | 0.0 |
| OHIDOHOF_57 | 0.0 | 1.0 | 0.0 |
| OHIDOHOF_58 | 0.0 | 1.0 | 0.0 |
| OHIDOHOF_59 | 0.0 | 1.0 | 0.0 |
| OHIDOHOF_60 | 0.0 | 1.0 | 0.0 |
| OHIDOHOF_61 | 0.0 | 1.0 | 0.0 |
| OHIDOHOF_62 | 0.0 | 1.0 | 0.0 |
| OHIDOHOF_63 | 0.0 | 1.0 | 0.0 |
| OHIDOHOF_64 | 1.0 | 0.0 | 1.0 |
| OHIDOHOF_65 | 0.0 | 1.0 | 0.0 |
| OHIDOHOF_66 | 0.0 | 1.0 | 0.0 |
| OHIDOHOF_67 | 0.0 | 1.0 | 0.0 |
| OHIDOHOF_68 | 0.0 | 1.0 | 0.0 |
| OHIDOHOF_69 | 0.0 | 1.0 | 0.0 |
| OHIDOHOF_70 | 1.0 | 0.0 | 1.0 |
| OHIDOHOF_71 | 0.0 | 1.0 | 0.0 |
| OHIDOHOF_72 | 0.0 | 1.0 | 0.0 |
| OHIDOHOF_73 | 0.0 | 1.0 | 0.0 |
| OHIDOHOF_74 | 1.0 | 0.0 | 1.0 |
| OHIDOHOF_75 | 0.0 | 1.0 | 0.0 |
| OHIDOHOF_76 | 0.0 | 1.0 | 0.0 |
| OHIDOHOF_77 | 0.0 | 1.0 | 0.0 |
| OHIDOHOF_78 | 0.0 | 1.0 | 0.0 |
| OHIDOHOF_79 | 0.0 | 1.0 | 0.0 |
| OHIDOHOF_80 | 0.0 | 1.0 | 0.0 |
| OHIDOHOF_81 | 0.0 | 1.0 | 0.0 |
| OHIDOHOF_82 | 1.0 | 0.0 | 1.0 |
| OHIDOHOF_83 | 0.0 | 1.0 | 0.0 |
| OHIDOHOF_84 | 0.0 | 1.0 | 0.0 |
| OHIDOHOF_85 | 0.0 | 1.0 | 0.0 |
| OHIDOHOF_86 | 0.0 | 1.0 | 0.0 |
| OHIDOHOF_87 | 0.0 | 1.0 | 0.0 |
| OHIDOHOF_88 | 1.0 | 0.0 | 1.0 |
| OHIDOHOF_89 | 0.0 | 1.0 | 0.0 |
| OHIDOHOF_90 | 1.0 | 0.0 | 1.0 |
| OHIDOHOF_91 | 0.0 | 1.0 | 0.0 |
| OHIDOHOF_92 | 0.0 | 1.0 | 0.0 |
| OHIDOHOF_93 | 1.0 | 0.0 | 1.0 |
| OHIDOHOF_94 | 0.0 | 1.0 | 0.0 |
| OHIDOHOF_95 | 0.0 | 1.0 | 0.0 |
| OHIDOHOF_96 | 1.0 | 0.0 | 1.0 |
| OHIDOHOF_97 | 1.0 | 0.0 | 1.0 |
| OHIDOHOF_98 | 1.0 | 0.0 | 1.0 |
| OHIDOHOF_99 | 1.0 | 0.0 | 1.0 |
| OHIDOHOF_100 | 1.0 | 0.0 | 1.0 |
| OHIDOHOF_101 | 1.0 | 0.0 | 1.0 |
| OHIDOHOF_102 | 1.0 | 0.0 | 1.0 |
| OHIDOHOF_103 | 1.0 | 0.0 | 1.0 |
| OHIDOHOF_104 | 1.0 | 0.0 | 1.0 |
| OHIDOHOF_106 | 0.0 | 1.0 | 0.0 |
| OHIDOHOF_107 | 1.0 | 0.0 | 1.0 |
| OHIDOHOF_108 | 1.0 | 0.0 | 1.0 |
| OHIDOHOF_109 | 1.0 | 0.0 | 1.0 |
| OHIDOHOF_110 | 1.0 | 0.0 | 1.0 |
| OHIDOHOF_111 | 1.0 | 0.0 | 1.0 |
| OHIDOHOF_112 | 1.0 | 0.0 | 1.0 |
| OHIDOHOF_113 | 0.0 | 1.0 | 0.0 |
| OHIDOHOF_114 | 1.0 | 0.0 | 1.0 |
| OHIDOHOF_115 | 0.0 | 1.0 | 0.0 |
| OHIDOHOF_116 | 1.0 | 0.0 | 1.0 |
| OHIDOHOF_117 | 0.0 | 1.0 | 0.0 |
| OHIDOHOF_118 | 1.0 | 0.0 | 1.0 |
| OHIDOHOF_119 | 1.0 | 0.0 | 1.0 |
| OHIDOHOF_121 | 1.0 | 0.0 | 1.0 |
| OHIDOHOF_122 | 0.0 | 1.0 | 0.0 |
| OHIDOHOF_123 | 0.0 | 1.0 | 0.0 |
| OHIDOHOF_124 | 0.0 | 1.0 | 0.0 |
| OHIDOHOF_125 | 0.0 | 1.0 | 0.0 |
| OHIDOHOF_126 | 0.0 | 1.0 | 0.0 |
| OHIDOHOF_127 | 1.0 | 0.0 | 1.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| No hit found | |||||
Phigaro v2.4.0 (Database: Jan. 2024 release)