Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 2 | 0 | 0 | 2.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| KBJBNGCH_30 | 131042 | 132967 | tet(Q) | ARO:3000191 | tet(Q) | 96.41 | 97.56 | Z21523.1 |
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| KBJBNGCH_30 | 131042 | 132967 | tet(Q) | Doxycycline, Tetracycline, Minocycline | 99.84 | 100.00 | L33696 |
| KBJBNGCH_39 | 37458 | 38408 | cfxA3 | Ampicillin | 86.01 | 98.34 | AF472622 |
| KBJBNGCH_39 | 37458 | 38408 | cfxA4 | Unknown Beta-lactam | 86.01 | 98.34 | AY769933 |
| KBJBNGCH_39 | 37458 | 38408 | cfxA5 | Unknown Beta-lactam | 86.01 | 98.34 | AY769934 |
| KBJBNGCH_39 | 37458 | 38408 | cfxA | Cefoxitin, Ampicillin | 86.01 | 98.34 | U38243 |
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| KBJBNGCH_30 | 131045 | 132967 | tet(Q) | tetracycline resistance ribosomal protection protein Tet(Q) | BLASTX | 99.53 | 100.00 | WP_063856407.1 |
| KBJBNGCH_39 | 37456 | 38409 | cfxA | CfxA family broad-spectrum class A beta-lactamase | BLASTX | 83.65 | 99.07 | WP_004339683.1 |
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| No hit found | ||||||
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| KBJBNGCH_1 | 0.0 | 1.0 | 0.0 |
| KBJBNGCH_2 | 0.0 | 1.0 | 0.0 |
| KBJBNGCH_13 | 0.0 | 1.0 | 0.0 |
| KBJBNGCH_20 | 0.0 | 1.0 | 0.0 |
| KBJBNGCH_21 | 0.0 | 1.0 | 0.0 |
| KBJBNGCH_22 | 0.0 | 1.0 | 0.0 |
| KBJBNGCH_23 | 1.0 | 0.0 | 1.0 |
| KBJBNGCH_24 | 0.0 | 1.0 | 0.0 |
| KBJBNGCH_25 | 0.0 | 1.0 | 0.0 |
| KBJBNGCH_26 | 0.0 | 1.0 | 0.0 |
| KBJBNGCH_27 | 0.0 | 1.0 | 0.0 |
| KBJBNGCH_28 | 0.0 | 1.0 | 0.0 |
| KBJBNGCH_29 | 0.0 | 1.0 | 0.0 |
| KBJBNGCH_30 | 0.0 | 1.0 | 0.0 |
| KBJBNGCH_31 | 0.0 | 1.0 | 0.0 |
| KBJBNGCH_32 | 0.0 | 1.0 | 0.0 |
| KBJBNGCH_33 | 0.0 | 1.0 | 0.0 |
| KBJBNGCH_34 | 0.0 | 1.0 | 0.0 |
| KBJBNGCH_35 | 0.0 | 1.0 | 0.0 |
| KBJBNGCH_36 | 0.0 | 1.0 | 0.0 |
| KBJBNGCH_37 | 0.0 | 1.0 | 0.0 |
| KBJBNGCH_38 | 0.0 | 1.0 | 0.0 |
| KBJBNGCH_39 | 0.0 | 1.0 | 0.0 |
| KBJBNGCH_40 | 0.0 | 1.0 | 0.0 |
| KBJBNGCH_41 | 0.0 | 1.0 | 0.0 |
| KBJBNGCH_42 | 0.0 | 1.0 | 0.0 |
| KBJBNGCH_43 | 0.0 | 1.0 | 0.0 |
| KBJBNGCH_44 | 0.0 | 1.0 | 0.0 |
| KBJBNGCH_45 | 0.0 | 1.0 | 0.0 |
| KBJBNGCH_46 | 0.0 | 1.0 | 0.0 |
| KBJBNGCH_47 | 0.0 | 1.0 | 0.0 |
| KBJBNGCH_48 | 0.0 | 1.0 | 0.0 |
| KBJBNGCH_49 | 0.0 | 1.0 | 0.0 |
| KBJBNGCH_50 | 0.0 | 1.0 | 0.0 |
| KBJBNGCH_51 | 0.0 | 1.0 | 0.0 |
| KBJBNGCH_52 | 0.0 | 1.0 | 0.0 |
| KBJBNGCH_53 | 0.0 | 1.0 | 0.0 |
| KBJBNGCH_54 | 0.0 | 1.0 | 0.0 |
| KBJBNGCH_55 | 1.0 | 0.0 | 1.0 |
| KBJBNGCH_56 | 0.0 | 1.0 | 0.0 |
| KBJBNGCH_57 | 1.0 | 0.0 | 1.0 |
| KBJBNGCH_58 | 0.0 | 1.0 | 0.0 |
| KBJBNGCH_59 | 1.0 | 0.0 | 1.0 |
| KBJBNGCH_60 | 0.0 | 1.0 | 0.0 |
| KBJBNGCH_61 | 0.0 | 1.0 | 0.0 |
| KBJBNGCH_62 | 0.0 | 1.0 | 0.0 |
| KBJBNGCH_63 | 1.0 | 0.0 | 1.0 |
| KBJBNGCH_64 | 0.0 | 1.0 | 0.0 |
| KBJBNGCH_65 | 0.0 | 1.0 | 0.0 |
| KBJBNGCH_66 | 0.0 | 1.0 | 0.0 |
| KBJBNGCH_67 | 0.0 | 1.0 | 0.0 |
| KBJBNGCH_68 | 0.0 | 1.0 | 0.0 |
| KBJBNGCH_69 | 0.0 | 1.0 | 0.0 |
| KBJBNGCH_70 | 1.0 | 0.0 | 1.0 |
| KBJBNGCH_71 | 1.0 | 0.0 | 1.0 |
| KBJBNGCH_72 | 0.0 | 1.0 | 0.0 |
| KBJBNGCH_73 | 0.0 | 1.0 | 0.0 |
| KBJBNGCH_74 | 1.0 | 0.0 | 1.0 |
| KBJBNGCH_75 | 1.0 | 0.0 | 1.0 |
| KBJBNGCH_76 | 1.0 | 0.0 | 1.0 |
| KBJBNGCH_77 | 1.0 | 0.0 | 1.0 |
| KBJBNGCH_79 | 1.0 | 0.0 | 1.0 |
| KBJBNGCH_80 | 1.0 | 0.0 | 1.0 |
| KBJBNGCH_81 | 1.0 | 0.0 | 1.0 |
| KBJBNGCH_82 | 0.0 | 1.0 | 0.0 |
| KBJBNGCH_83 | 0.0 | 1.0 | 0.0 |
| KBJBNGCH_84 | 0.0 | 1.0 | 0.0 |
| KBJBNGCH_85 | 1.0 | 0.0 | 1.0 |
| KBJBNGCH_86 | 1.0 | 0.0 | 1.0 |
| KBJBNGCH_87 | 0.0 | 1.0 | 0.0 |
| KBJBNGCH_88 | 1.0 | 0.0 | 1.0 |
| KBJBNGCH_89 | 1.0 | 0.0 | 1.0 |
| KBJBNGCH_90 | 1.0 | 0.0 | 1.0 |
| KBJBNGCH_91 | 0.0 | 1.0 | 0.0 |
| KBJBNGCH_92 | 1.0 | 0.0 | 1.0 |
| KBJBNGCH_93 | 1.0 | 0.0 | 1.0 |
| KBJBNGCH_94 | 0.0 | 1.0 | 0.0 |
| KBJBNGCH_95 | 1.0 | 0.0 | 1.0 |
| KBJBNGCH_96 | 1.0 | 0.0 | 1.0 |
| KBJBNGCH_97 | 1.0 | 0.0 | 1.0 |
| KBJBNGCH_98 | 0.0 | 1.0 | 0.0 |
| KBJBNGCH_99 | 1.0 | 0.0 | 1.0 |
| KBJBNGCH_100 | 0.0 | 1.0 | 0.0 |
| KBJBNGCH_101 | 1.0 | 0.0 | 1.0 |
| KBJBNGCH_102 | 0.0 | 1.0 | 0.0 |
| KBJBNGCH_103 | 1.0 | 0.0 | 1.0 |
| KBJBNGCH_104 | 1.0 | 0.0 | 1.0 |
| KBJBNGCH_105 | 0.0 | 1.0 | 0.0 |
| KBJBNGCH_106 | 0.0 | 1.0 | 0.0 |
| KBJBNGCH_107 | 0.0 | 1.0 | 0.0 |
| KBJBNGCH_108 | 1.0 | 0.0 | 1.0 |
| KBJBNGCH_109 | 0.0 | 1.0 | 0.0 |
| KBJBNGCH_110 | 1.0 | 0.0 | 1.0 |
| KBJBNGCH_111 | 1.0 | 0.0 | 1.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| KBJBNGCH_35 | 80734 | 93254 | False | Siphoviridae | VOG8171, |
| KBJBNGCH_42 | 30248 | 33531 | True | Unknown | VOG6282, |
Phigaro v2.4.0 (Database: Jan. 2024 release)