Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 2 | 0 | 1 | 2.24 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| AKNPCAJD_1 | 200988 | 202913 | tet(Q) | ARO:3000191 | tet(Q) | 96.41 | 97.56 | Z21523.1 |
| AKNPCAJD_138 | 862 | 1827 | CfxA2 | ARO:3003002 | CfxA2 | 100.00 | 100.00 | AF118110.1 |
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| AKNPCAJD_138 | 862 | 1827 | cfxA3 | Ampicillin | 99.90 | 100.00 | AF472622 |
| AKNPCAJD_138 | 862 | 1827 | cfxA4 | Unknown Beta-lactam | 99.90 | 100.00 | AY769933 |
| AKNPCAJD_138 | 862 | 1827 | cfxA5 | Unknown Beta-lactam | 99.90 | 100.00 | AY769934 |
| AKNPCAJD_138 | 862 | 1827 | cfxA | Cefoxitin, Ampicillin | 99.90 | 100.00 | U38243 |
| AKNPCAJD_1 | 200988 | 202913 | tet(Q) | Doxycycline, Tetracycline, Minocycline | 99.84 | 100.00 | L33696 |
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| AKNPCAJD_138 | 862 | 1824 | cfxA | CfxA family broad-spectrum class A beta-lactamase | EXACTX | 100.00 | 100.00 | WP_004339683.1 |
| AKNPCAJD_1 | 200988 | 202910 | tet(Q) | tetracycline resistance ribosomal protection protein Tet(Q) | BLASTX | 99.53 | 100.00 | WP_063856407.1 |
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| AKNPCAJD_104 | 38602 | 37022 | GroEL | 0.0 | folding of newly synthesized proteins, preventing misfolding and aggregation | 86.91 | 96.70 | BAA04222 |
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| No hit found | ||||||
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| AKNPCAJD_1 | 0.0 | 1.0 | 0.0 |
| AKNPCAJD_2 | 0.0 | 1.0 | 0.0 |
| AKNPCAJD_3 | 0.0 | 1.0 | 0.0 |
| AKNPCAJD_4 | 0.0 | 1.0 | 0.0 |
| AKNPCAJD_6 | 0.0 | 1.0 | 0.0 |
| AKNPCAJD_7 | 0.0 | 1.0 | 0.0 |
| AKNPCAJD_8 | 0.0 | 1.0 | 0.0 |
| AKNPCAJD_9 | 0.0 | 1.0 | 0.0 |
| AKNPCAJD_10 | 1.0 | 0.0 | 1.0 |
| AKNPCAJD_11 | 0.0 | 1.0 | 0.0 |
| AKNPCAJD_12 | 0.0 | 1.0 | 0.0 |
| AKNPCAJD_13 | 0.0 | 1.0 | 0.0 |
| AKNPCAJD_14 | 1.0 | 0.0 | 1.0 |
| AKNPCAJD_15 | 0.0 | 1.0 | 0.0 |
| AKNPCAJD_24 | 0.0 | 1.0 | 0.0 |
| AKNPCAJD_35 | 0.0 | 1.0 | 0.0 |
| AKNPCAJD_46 | 0.0 | 1.0 | 0.0 |
| AKNPCAJD_57 | 0.0 | 1.0 | 0.0 |
| AKNPCAJD_67 | 0.0 | 1.0 | 0.0 |
| AKNPCAJD_68 | 0.0 | 1.0 | 0.0 |
| AKNPCAJD_69 | 0.0 | 1.0 | 0.0 |
| AKNPCAJD_70 | 0.0 | 1.0 | 0.0 |
| AKNPCAJD_71 | 0.0 | 1.0 | 0.0 |
| AKNPCAJD_72 | 0.0 | 1.0 | 0.0 |
| AKNPCAJD_73 | 0.0 | 1.0 | 0.0 |
| AKNPCAJD_74 | 0.0 | 1.0 | 0.0 |
| AKNPCAJD_75 | 0.0 | 1.0 | 0.0 |
| AKNPCAJD_76 | 0.0 | 1.0 | 0.0 |
| AKNPCAJD_77 | 0.0 | 1.0 | 0.0 |
| AKNPCAJD_78 | 0.0 | 1.0 | 0.0 |
| AKNPCAJD_79 | 0.0 | 1.0 | 0.0 |
| AKNPCAJD_80 | 0.0 | 1.0 | 0.0 |
| AKNPCAJD_81 | 0.0 | 1.0 | 0.0 |
| AKNPCAJD_82 | 0.0 | 1.0 | 0.0 |
| AKNPCAJD_83 | 0.0 | 1.0 | 0.0 |
| AKNPCAJD_84 | 0.0 | 1.0 | 0.0 |
| AKNPCAJD_85 | 0.0 | 1.0 | 0.0 |
| AKNPCAJD_86 | 0.0 | 1.0 | 0.0 |
| AKNPCAJD_87 | 0.0 | 1.0 | 0.0 |
| AKNPCAJD_88 | 0.0 | 1.0 | 0.0 |
| AKNPCAJD_89 | 0.0 | 1.0 | 0.0 |
| AKNPCAJD_90 | 0.0 | 1.0 | 0.0 |
| AKNPCAJD_91 | 1.0 | 0.0 | 1.0 |
| AKNPCAJD_92 | 0.0 | 1.0 | 0.0 |
| AKNPCAJD_93 | 0.0 | 1.0 | 0.0 |
| AKNPCAJD_94 | 0.0 | 1.0 | 0.0 |
| AKNPCAJD_95 | 0.0 | 1.0 | 0.0 |
| AKNPCAJD_96 | 0.0 | 1.0 | 0.0 |
| AKNPCAJD_97 | 0.0 | 1.0 | 0.0 |
| AKNPCAJD_98 | 0.0 | 1.0 | 0.0 |
| AKNPCAJD_99 | 0.0 | 1.0 | 0.0 |
| AKNPCAJD_100 | 0.0 | 1.0 | 0.0 |
| AKNPCAJD_101 | 0.0 | 1.0 | 0.0 |
| AKNPCAJD_102 | 0.0 | 1.0 | 0.0 |
| AKNPCAJD_103 | 0.0 | 1.0 | 0.0 |
| AKNPCAJD_104 | 0.0 | 1.0 | 0.0 |
| AKNPCAJD_105 | 0.0 | 1.0 | 0.0 |
| AKNPCAJD_106 | 0.0 | 1.0 | 0.0 |
| AKNPCAJD_107 | 0.0 | 1.0 | 0.0 |
| AKNPCAJD_108 | 0.0 | 1.0 | 0.0 |
| AKNPCAJD_109 | 0.0 | 1.0 | 0.0 |
| AKNPCAJD_110 | 0.0 | 1.0 | 0.0 |
| AKNPCAJD_111 | 0.0 | 1.0 | 0.0 |
| AKNPCAJD_112 | 1.0 | 0.0 | 1.0 |
| AKNPCAJD_113 | 0.0 | 1.0 | 0.0 |
| AKNPCAJD_114 | 0.0 | 1.0 | 0.0 |
| AKNPCAJD_115 | 0.0 | 1.0 | 0.0 |
| AKNPCAJD_116 | 0.0 | 1.0 | 0.0 |
| AKNPCAJD_117 | 0.0 | 1.0 | 0.0 |
| AKNPCAJD_118 | 1.0 | 0.0 | 1.0 |
| AKNPCAJD_119 | 0.0 | 1.0 | 0.0 |
| AKNPCAJD_120 | 1.0 | 0.0 | 1.0 |
| AKNPCAJD_121 | 0.0 | 1.0 | 0.0 |
| AKNPCAJD_122 | 0.0 | 1.0 | 0.0 |
| AKNPCAJD_123 | 0.0 | 1.0 | 0.0 |
| AKNPCAJD_124 | 0.0 | 1.0 | 0.0 |
| AKNPCAJD_125 | 0.0 | 1.0 | 0.0 |
| AKNPCAJD_126 | 0.0 | 1.0 | 0.0 |
| AKNPCAJD_127 | 0.0 | 1.0 | 0.0 |
| AKNPCAJD_128 | 0.0 | 1.0 | 0.0 |
| AKNPCAJD_129 | 0.0 | 1.0 | 0.0 |
| AKNPCAJD_130 | 1.0 | 0.0 | 1.0 |
| AKNPCAJD_131 | 0.0 | 1.0 | 0.0 |
| AKNPCAJD_132 | 0.0 | 1.0 | 0.0 |
| AKNPCAJD_133 | 1.0 | 0.0 | 1.0 |
| AKNPCAJD_134 | 0.0 | 1.0 | 0.0 |
| AKNPCAJD_135 | 0.0 | 1.0 | 0.0 |
| AKNPCAJD_136 | 0.0 | 1.0 | 0.0 |
| AKNPCAJD_137 | 0.0 | 1.0 | 0.0 |
| AKNPCAJD_138 | 0.0 | 1.0 | 0.0 |
| AKNPCAJD_139 | 0.0 | 1.0 | 0.0 |
| AKNPCAJD_140 | 1.0 | 0.0 | 1.0 |
| AKNPCAJD_141 | 0.0 | 1.0 | 0.0 |
| AKNPCAJD_142 | 1.0 | 0.0 | 1.0 |
| AKNPCAJD_143 | 1.0 | 0.0 | 1.0 |
| AKNPCAJD_144 | 1.0 | 0.0 | 1.0 |
| AKNPCAJD_145 | 0.0 | 1.0 | 0.0 |
| AKNPCAJD_146 | 1.0 | 0.0 | 1.0 |
| AKNPCAJD_147 | 1.0 | 0.0 | 1.0 |
| AKNPCAJD_148 | 0.0 | 1.0 | 0.0 |
| AKNPCAJD_149 | 1.0 | 0.0 | 1.0 |
| AKNPCAJD_150 | 1.0 | 0.0 | 1.0 |
| AKNPCAJD_151 | 1.0 | 0.0 | 1.0 |
| AKNPCAJD_152 | 1.0 | 0.0 | 1.0 |
| AKNPCAJD_153 | 0.0 | 1.0 | 0.0 |
| AKNPCAJD_155 | 1.0 | 0.0 | 1.0 |
| AKNPCAJD_156 | 0.0 | 1.0 | 0.0 |
| AKNPCAJD_158 | 1.0 | 0.0 | 1.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| AKNPCAJD_94 | 18430 | 32682 | False | Unknown | VOG4572, |
| AKNPCAJD_95 | 22279 | 28237 | False | Myoviridae | VOG11032, |
| AKNPCAJD_115 | 67014 | 76273 | False | Unknown | VOG6183, |
Phigaro v2.4.0 (Database: Jan. 2024 release)