Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 2 | 0 | 0 | 2.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| ADAIMGHJ_123 | 17143 | 19068 | tet(Q) | ARO:3000191 | tet(Q) | 96.41 | 97.56 | Z21523.1 |
| ADAIMGHJ_160 | 2147 | 2947 | ErmF | ARO:3000498 | ErmF | 98.87 | 100.00 | M17124.1 |
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| ADAIMGHJ_123 | 17143 | 19068 | tet(Q) | Doxycycline, Tetracycline, Minocycline | 99.84 | 100.00 | L33696 |
| ADAIMGHJ_160 | 2147 | 2947 | erm(F) | Erythromycin, Lincomycin, Clindamycin, Quinupristin, Pristinamycin IA, Virginiamycin S | 99.50 | 100.00 | M17808 |
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| ADAIMGHJ_123 | 17146 | 19068 | tet(Q) | tetracycline resistance ribosomal protection protein Tet(Q) | BLASTX | 99.53 | 100.00 | WP_063856407.1 |
| ADAIMGHJ_160 | 2150 | 2947 | erm(F) | 23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(F) | BLASTX | 99.25 | 100.00 | WP_002682030.1 |
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| No hit found | ||||||
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| ADAIMGHJ_1 | 0.0 | 1.0 | 0.0 |
| ADAIMGHJ_2 | 0.0 | 1.0 | 0.0 |
| ADAIMGHJ_3 | 1.0 | 0.0 | 1.0 |
| ADAIMGHJ_4 | 1.0 | 0.0 | 1.0 |
| ADAIMGHJ_5 | 1.0 | 0.0 | 1.0 |
| ADAIMGHJ_6 | 1.0 | 0.0 | 1.0 |
| ADAIMGHJ_7 | 1.0 | 0.0 | 1.0 |
| ADAIMGHJ_8 | 1.0 | 0.0 | 1.0 |
| ADAIMGHJ_9 | 1.0 | 0.0 | 1.0 |
| ADAIMGHJ_10 | 0.0 | 1.0 | 0.0 |
| ADAIMGHJ_11 | 1.0 | 0.0 | 1.0 |
| ADAIMGHJ_12 | 1.0 | 0.0 | 1.0 |
| ADAIMGHJ_13 | 0.0 | 1.0 | 0.0 |
| ADAIMGHJ_14 | 1.0 | 0.0 | 1.0 |
| ADAIMGHJ_15 | 1.0 | 0.0 | 1.0 |
| ADAIMGHJ_16 | 1.0 | 0.0 | 1.0 |
| ADAIMGHJ_17 | 1.0 | 0.0 | 1.0 |
| ADAIMGHJ_18 | 1.0 | 0.0 | 1.0 |
| ADAIMGHJ_19 | 1.0 | 0.0 | 1.0 |
| ADAIMGHJ_20 | 1.0 | 0.0 | 1.0 |
| ADAIMGHJ_21 | 0.0 | 1.0 | 0.0 |
| ADAIMGHJ_22 | 1.0 | 0.0 | 1.0 |
| ADAIMGHJ_24 | 0.0 | 1.0 | 0.0 |
| ADAIMGHJ_25 | 0.0 | 1.0 | 0.0 |
| ADAIMGHJ_35 | 0.0 | 1.0 | 0.0 |
| ADAIMGHJ_46 | 0.0 | 1.0 | 0.0 |
| ADAIMGHJ_57 | 0.0 | 1.0 | 0.0 |
| ADAIMGHJ_68 | 0.0 | 1.0 | 0.0 |
| ADAIMGHJ_79 | 0.0 | 1.0 | 0.0 |
| ADAIMGHJ_90 | 0.0 | 1.0 | 0.0 |
| ADAIMGHJ_101 | 0.0 | 1.0 | 0.0 |
| ADAIMGHJ_103 | 0.0 | 1.0 | 0.0 |
| ADAIMGHJ_104 | 0.0 | 1.0 | 0.0 |
| ADAIMGHJ_105 | 0.0 | 1.0 | 0.0 |
| ADAIMGHJ_106 | 0.0 | 1.0 | 0.0 |
| ADAIMGHJ_107 | 0.0 | 1.0 | 0.0 |
| ADAIMGHJ_108 | 0.0 | 1.0 | 0.0 |
| ADAIMGHJ_109 | 0.0 | 1.0 | 0.0 |
| ADAIMGHJ_110 | 0.0 | 1.0 | 0.0 |
| ADAIMGHJ_111 | 0.0 | 1.0 | 0.0 |
| ADAIMGHJ_112 | 0.0 | 1.0 | 0.0 |
| ADAIMGHJ_113 | 0.0 | 1.0 | 0.0 |
| ADAIMGHJ_114 | 0.0 | 1.0 | 0.0 |
| ADAIMGHJ_115 | 0.0 | 1.0 | 0.0 |
| ADAIMGHJ_116 | 0.0 | 1.0 | 0.0 |
| ADAIMGHJ_117 | 0.0 | 1.0 | 0.0 |
| ADAIMGHJ_118 | 0.0 | 1.0 | 0.0 |
| ADAIMGHJ_119 | 0.0 | 1.0 | 0.0 |
| ADAIMGHJ_120 | 0.0 | 1.0 | 0.0 |
| ADAIMGHJ_121 | 0.0 | 1.0 | 0.0 |
| ADAIMGHJ_122 | 0.0 | 1.0 | 0.0 |
| ADAIMGHJ_123 | 0.0 | 1.0 | 0.0 |
| ADAIMGHJ_124 | 0.0 | 1.0 | 0.0 |
| ADAIMGHJ_125 | 0.0 | 1.0 | 0.0 |
| ADAIMGHJ_126 | 0.0 | 1.0 | 0.0 |
| ADAIMGHJ_127 | 0.0 | 1.0 | 0.0 |
| ADAIMGHJ_128 | 0.0 | 1.0 | 0.0 |
| ADAIMGHJ_129 | 0.0 | 1.0 | 0.0 |
| ADAIMGHJ_130 | 0.0 | 1.0 | 0.0 |
| ADAIMGHJ_131 | 0.0 | 1.0 | 0.0 |
| ADAIMGHJ_132 | 0.0 | 1.0 | 0.0 |
| ADAIMGHJ_133 | 0.0 | 1.0 | 0.0 |
| ADAIMGHJ_134 | 0.0 | 1.0 | 0.0 |
| ADAIMGHJ_135 | 0.0 | 1.0 | 0.0 |
| ADAIMGHJ_136 | 0.0 | 1.0 | 0.0 |
| ADAIMGHJ_137 | 0.0 | 1.0 | 0.0 |
| ADAIMGHJ_138 | 0.0 | 1.0 | 0.0 |
| ADAIMGHJ_139 | 0.0 | 1.0 | 0.0 |
| ADAIMGHJ_140 | 0.0 | 1.0 | 0.0 |
| ADAIMGHJ_141 | 0.0 | 1.0 | 0.0 |
| ADAIMGHJ_142 | 0.0 | 1.0 | 0.0 |
| ADAIMGHJ_143 | 0.0 | 1.0 | 0.0 |
| ADAIMGHJ_144 | 0.0 | 1.0 | 0.0 |
| ADAIMGHJ_145 | 0.0 | 1.0 | 0.0 |
| ADAIMGHJ_146 | 1.0 | 0.0 | 1.0 |
| ADAIMGHJ_147 | 0.0 | 1.0 | 0.0 |
| ADAIMGHJ_148 | 0.0 | 1.0 | 0.0 |
| ADAIMGHJ_149 | 0.0 | 1.0 | 0.0 |
| ADAIMGHJ_150 | 0.0 | 1.0 | 0.0 |
| ADAIMGHJ_151 | 0.0 | 1.0 | 0.0 |
| ADAIMGHJ_152 | 1.0 | 0.0 | 1.0 |
| ADAIMGHJ_153 | 0.0 | 1.0 | 0.0 |
| ADAIMGHJ_154 | 1.0 | 0.0 | 1.0 |
| ADAIMGHJ_155 | 1.0 | 0.0 | 1.0 |
| ADAIMGHJ_156 | 1.0 | 0.0 | 1.0 |
| ADAIMGHJ_157 | 1.0 | 0.0 | 1.0 |
| ADAIMGHJ_158 | 0.0 | 1.0 | 0.0 |
| ADAIMGHJ_159 | 1.0 | 0.0 | 1.0 |
| ADAIMGHJ_160 | 1.0 | 0.0 | 1.0 |
| ADAIMGHJ_161 | 1.0 | 0.0 | 1.0 |
| ADAIMGHJ_162 | 1.0 | 0.0 | 1.0 |
| ADAIMGHJ_163 | 1.0 | 0.0 | 1.0 |
| ADAIMGHJ_164 | 1.0 | 0.0 | 1.0 |
| ADAIMGHJ_165 | 1.0 | 0.0 | 1.0 |
| ADAIMGHJ_167 | 1.0 | 0.0 | 1.0 |
| ADAIMGHJ_168 | 1.0 | 0.0 | 1.0 |
| ADAIMGHJ_169 | 0.0 | 1.0 | 0.0 |
| ADAIMGHJ_170 | 1.0 | 0.0 | 1.0 |
| ADAIMGHJ_171 | 1.0 | 0.0 | 1.0 |
| ADAIMGHJ_172 | 1.0 | 0.0 | 1.0 |
| ADAIMGHJ_173 | 1.0 | 0.0 | 1.0 |
| ADAIMGHJ_174 | 1.0 | 0.0 | 1.0 |
| ADAIMGHJ_175 | 1.0 | 0.0 | 1.0 |
| ADAIMGHJ_176 | 0.0 | 1.0 | 0.0 |
| ADAIMGHJ_177 | 1.0 | 0.0 | 1.0 |
| ADAIMGHJ_178 | 1.0 | 0.0 | 1.0 |
| ADAIMGHJ_179 | 1.0 | 0.0 | 1.0 |
| ADAIMGHJ_180 | 0.0 | 1.0 | 0.0 |
| ADAIMGHJ_181 | 0.0 | 1.0 | 0.0 |
| ADAIMGHJ_182 | 0.0 | 1.0 | 0.0 |
| ADAIMGHJ_183 | 1.0 | 0.0 | 1.0 |
| ADAIMGHJ_184 | 1.0 | 0.0 | 1.0 |
| ADAIMGHJ_185 | 0.0 | 1.0 | 0.0 |
| ADAIMGHJ_186 | 0.0 | 1.0 | 0.0 |
| ADAIMGHJ_187 | 1.0 | 0.0 | 1.0 |
| ADAIMGHJ_188 | 1.0 | 0.0 | 1.0 |
| ADAIMGHJ_189 | 1.0 | 0.0 | 1.0 |
| ADAIMGHJ_190 | 0.0 | 1.0 | 0.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| ADAIMGHJ_1 | 8795 | 19670 | False | Siphoviridae | VOG3992, |
| ADAIMGHJ_136 | 235743 | 243547 | False | Siphoviridae | VOG0749, |
| ADAIMGHJ_169 | 101310 | 109495 | False | Unknown | VOG4573, |
Phigaro v2.4.0 (Database: Jan. 2024 release)