Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 4 | 0 | 0 | 4.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| EMOKJMCG_65 | 6880 | 7743 | aadS | ARO:3004683 | aadS | 100.00 | 100.00 | M72415.1 |
| EMOKJMCG_65 | 5568 | 6704 | tet(X) | ARO:3000205 | tet(X) | 99.47 | 97.42 | M37699.1 |
| EMOKJMCG_65 | 4230 | 5369 | tet(X1) | ARO:3005166 | tet(X1) | 99.72 | 105.57 | AJ311171.1 |
| EMOKJMCG_65 | 3124 | 3924 | ErmF | ARO:3000498 | ErmF | 97.74 | 100.00 | M17124.1 |
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| EMOKJMCG_65 | 3124 | 3924 | erm(F) | Erythromycin, Lincomycin, Clindamycin, Quinupristin, Pristinamycin IA, Virginiamycin S | 99.88 | 100.00 | M62487 |
| EMOKJMCG_65 | 5538 | 6704 | tet(X) | Doxycycline, Tetracycline, Minocycline, Tigecycline | 99.83 | 100.00 | M37699 |
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| EMOKJMCG_65 | 6880 | 7740 | aadS | aminoglycoside 6-adenylyltransferase AadS | EXACTX | 100.00 | 100.00 | WP_003013318.1 |
| EMOKJMCG_65 | 5538 | 6701 | tet(X2) | tetracycline-inactivating monooxygenase Tet(X2) | EXACTX | 100.00 | 100.00 | WP_008651082.1 |
| EMOKJMCG_65 | 4230 | 5366 | tet(X1) | tetracycline-inactivating monooxygenase Tet(X1) | BLASTX | 99.74 | 100.00 | WP_204376222.1 |
| EMOKJMCG_65 | 3127 | 3924 | erm(F) | 23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(F) | BLASTX | 99.62 | 100.00 | WP_063844771.1 |
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| No hit found | ||||||
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| EMOKJMCG_1 | 0.0 | 1.0 | 0.0 |
| EMOKJMCG_2 | 0.0 | 1.0 | 0.0 |
| EMOKJMCG_3 | 1.0 | 0.0 | 1.0 |
| EMOKJMCG_4 | 1.0 | 0.0 | 1.0 |
| EMOKJMCG_5 | 1.0 | 0.0 | 1.0 |
| EMOKJMCG_8 | 0.0 | 1.0 | 0.0 |
| EMOKJMCG_9 | 0.0 | 1.0 | 0.0 |
| EMOKJMCG_13 | 0.0 | 1.0 | 0.0 |
| EMOKJMCG_24 | 0.0 | 1.0 | 0.0 |
| EMOKJMCG_35 | 0.0 | 1.0 | 0.0 |
| EMOKJMCG_46 | 0.0 | 1.0 | 0.0 |
| EMOKJMCG_57 | 0.0 | 1.0 | 0.0 |
| EMOKJMCG_65 | 0.0 | 1.0 | 0.0 |
| EMOKJMCG_66 | 0.0 | 1.0 | 0.0 |
| EMOKJMCG_67 | 0.0 | 1.0 | 0.0 |
| EMOKJMCG_68 | 0.0 | 1.0 | 0.0 |
| EMOKJMCG_69 | 0.0 | 1.0 | 0.0 |
| EMOKJMCG_70 | 0.0 | 1.0 | 0.0 |
| EMOKJMCG_71 | 0.0 | 1.0 | 0.0 |
| EMOKJMCG_72 | 0.0 | 1.0 | 0.0 |
| EMOKJMCG_73 | 0.0 | 1.0 | 0.0 |
| EMOKJMCG_74 | 0.0 | 1.0 | 0.0 |
| EMOKJMCG_75 | 0.0 | 1.0 | 0.0 |
| EMOKJMCG_76 | 0.0 | 1.0 | 0.0 |
| EMOKJMCG_77 | 0.0 | 1.0 | 0.0 |
| EMOKJMCG_78 | 0.0 | 1.0 | 0.0 |
| EMOKJMCG_79 | 0.0 | 1.0 | 0.0 |
| EMOKJMCG_80 | 0.0 | 1.0 | 0.0 |
| EMOKJMCG_81 | 0.0 | 1.0 | 0.0 |
| EMOKJMCG_82 | 0.0 | 1.0 | 0.0 |
| EMOKJMCG_83 | 0.0 | 1.0 | 0.0 |
| EMOKJMCG_84 | 0.0 | 1.0 | 0.0 |
| EMOKJMCG_85 | 0.0 | 1.0 | 0.0 |
| EMOKJMCG_86 | 0.0 | 1.0 | 0.0 |
| EMOKJMCG_87 | 0.0 | 1.0 | 0.0 |
| EMOKJMCG_88 | 0.0 | 1.0 | 0.0 |
| EMOKJMCG_89 | 0.0 | 1.0 | 0.0 |
| EMOKJMCG_90 | 0.0 | 1.0 | 0.0 |
| EMOKJMCG_91 | 0.0 | 1.0 | 0.0 |
| EMOKJMCG_92 | 0.0 | 1.0 | 0.0 |
| EMOKJMCG_93 | 0.0 | 1.0 | 0.0 |
| EMOKJMCG_94 | 0.0 | 1.0 | 0.0 |
| EMOKJMCG_95 | 1.0 | 0.0 | 1.0 |
| EMOKJMCG_96 | 0.0 | 1.0 | 0.0 |
| EMOKJMCG_97 | 0.0 | 1.0 | 0.0 |
| EMOKJMCG_98 | 0.0 | 1.0 | 0.0 |
| EMOKJMCG_99 | 1.0 | 0.0 | 1.0 |
| EMOKJMCG_100 | 0.0 | 1.0 | 0.0 |
| EMOKJMCG_101 | 0.0 | 1.0 | 0.0 |
| EMOKJMCG_102 | 0.0 | 1.0 | 0.0 |
| EMOKJMCG_103 | 0.0 | 1.0 | 0.0 |
| EMOKJMCG_104 | 0.0 | 1.0 | 0.0 |
| EMOKJMCG_105 | 0.0 | 1.0 | 0.0 |
| EMOKJMCG_106 | 0.0 | 1.0 | 0.0 |
| EMOKJMCG_107 | 0.0 | 1.0 | 0.0 |
| EMOKJMCG_108 | 0.0 | 1.0 | 0.0 |
| EMOKJMCG_109 | 1.0 | 0.0 | 1.0 |
| EMOKJMCG_110 | 0.0 | 1.0 | 0.0 |
| EMOKJMCG_111 | 0.0 | 1.0 | 0.0 |
| EMOKJMCG_112 | 0.0 | 1.0 | 0.0 |
| EMOKJMCG_113 | 0.0 | 1.0 | 0.0 |
| EMOKJMCG_114 | 0.0 | 1.0 | 0.0 |
| EMOKJMCG_115 | 0.0 | 1.0 | 0.0 |
| EMOKJMCG_116 | 0.0 | 1.0 | 0.0 |
| EMOKJMCG_117 | 0.0 | 1.0 | 0.0 |
| EMOKJMCG_118 | 0.0 | 1.0 | 0.0 |
| EMOKJMCG_119 | 1.0 | 0.0 | 1.0 |
| EMOKJMCG_120 | 1.0 | 0.0 | 1.0 |
| EMOKJMCG_121 | 0.0 | 1.0 | 0.0 |
| EMOKJMCG_122 | 1.0 | 0.0 | 1.0 |
| EMOKJMCG_123 | 0.0 | 1.0 | 0.0 |
| EMOKJMCG_124 | 0.0 | 1.0 | 0.0 |
| EMOKJMCG_125 | 0.0 | 1.0 | 0.0 |
| EMOKJMCG_126 | 0.0 | 1.0 | 0.0 |
| EMOKJMCG_127 | 0.0 | 1.0 | 0.0 |
| EMOKJMCG_128 | 1.0 | 0.0 | 1.0 |
| EMOKJMCG_129 | 0.0 | 1.0 | 0.0 |
| EMOKJMCG_130 | 0.0 | 1.0 | 0.0 |
| EMOKJMCG_131 | 1.0 | 0.0 | 1.0 |
| EMOKJMCG_132 | 1.0 | 0.0 | 1.0 |
| EMOKJMCG_133 | 1.0 | 0.0 | 1.0 |
| EMOKJMCG_134 | 1.0 | 0.0 | 1.0 |
| EMOKJMCG_135 | 0.0 | 1.0 | 0.0 |
| EMOKJMCG_136 | 0.0 | 1.0 | 0.0 |
| EMOKJMCG_137 | 0.0 | 1.0 | 0.0 |
| EMOKJMCG_138 | 1.0 | 0.0 | 1.0 |
| EMOKJMCG_140 | 0.0 | 1.0 | 0.0 |
| EMOKJMCG_141 | 0.0 | 1.0 | 0.0 |
| EMOKJMCG_142 | 1.0 | 0.0 | 1.0 |
| EMOKJMCG_143 | 1.0 | 0.0 | 1.0 |
| EMOKJMCG_144 | 1.0 | 0.0 | 1.0 |
| EMOKJMCG_145 | 1.0 | 0.0 | 1.0 |
| EMOKJMCG_146 | 0.0 | 1.0 | 0.0 |
| EMOKJMCG_147 | 1.0 | 0.0 | 1.0 |
| EMOKJMCG_149 | 1.0 | 0.0 | 1.0 |
| EMOKJMCG_150 | 1.0 | 0.0 | 1.0 |
| EMOKJMCG_151 | 1.0 | 0.0 | 1.0 |
| EMOKJMCG_152 | 0.0 | 1.0 | 0.0 |
| EMOKJMCG_153 | 0.0 | 1.0 | 0.0 |
| EMOKJMCG_154 | 0.0 | 1.0 | 0.0 |
| EMOKJMCG_155 | 0.0 | 1.0 | 0.0 |
| EMOKJMCG_156 | 1.0 | 0.0 | 1.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| EMOKJMCG_46 | 52278 | 59157 | False | Unknown | VOG3239, |
Phigaro v2.4.0 (Database: Jan. 2024 release)