Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 1 | 0 | 1 | 1.41 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| ACKIOIEG_38 | 32857 | 34830 | tet(Q) | ARO:3000191 | tet(Q) | 96.35 | 100.00 | Z21523.1 |
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| ACKIOIEG_38 | 32857 | 34782 | tet(Q) | Doxycycline, Tetracycline, Minocycline | 99.84 | 100.00 | L33696 |
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| ACKIOIEG_38 | 32860 | 34782 | tet(Q) | tetracycline resistance ribosomal protection protein Tet(Q) | BLASTX | 99.53 | 100.00 | WP_063856407.1 |
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| ACKIOIEG_91 | 27552 | 25972 | GroEL | 0.0 | folding of newly synthesized proteins, preventing misfolding and aggregation | 86.91 | 96.70 | BAA04222 |
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| No hit found | ||||||
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| ACKIOIEG_1 | 0.0 | 1.0 | 0.0 |
| ACKIOIEG_2 | 0.0 | 1.0 | 0.0 |
| ACKIOIEG_13 | 0.0 | 1.0 | 0.0 |
| ACKIOIEG_24 | 0.0 | 1.0 | 0.0 |
| ACKIOIEG_29 | 0.0 | 1.0 | 0.0 |
| ACKIOIEG_30 | 0.0 | 1.0 | 0.0 |
| ACKIOIEG_31 | 0.0 | 1.0 | 0.0 |
| ACKIOIEG_32 | 0.0 | 1.0 | 0.0 |
| ACKIOIEG_33 | 0.0 | 1.0 | 0.0 |
| ACKIOIEG_34 | 1.0 | 0.0 | 1.0 |
| ACKIOIEG_35 | 0.0 | 1.0 | 0.0 |
| ACKIOIEG_36 | 0.0 | 1.0 | 0.0 |
| ACKIOIEG_37 | 0.0 | 1.0 | 0.0 |
| ACKIOIEG_38 | 0.0 | 1.0 | 0.0 |
| ACKIOIEG_39 | 0.0 | 1.0 | 0.0 |
| ACKIOIEG_40 | 0.0 | 1.0 | 0.0 |
| ACKIOIEG_41 | 0.0 | 1.0 | 0.0 |
| ACKIOIEG_42 | 0.0 | 1.0 | 0.0 |
| ACKIOIEG_43 | 0.0 | 1.0 | 0.0 |
| ACKIOIEG_44 | 1.0 | 0.0 | 1.0 |
| ACKIOIEG_45 | 0.0 | 1.0 | 0.0 |
| ACKIOIEG_46 | 0.0 | 1.0 | 0.0 |
| ACKIOIEG_47 | 0.0 | 1.0 | 0.0 |
| ACKIOIEG_48 | 0.0 | 1.0 | 0.0 |
| ACKIOIEG_49 | 0.0 | 1.0 | 0.0 |
| ACKIOIEG_50 | 0.0 | 1.0 | 0.0 |
| ACKIOIEG_51 | 1.0 | 0.0 | 1.0 |
| ACKIOIEG_52 | 0.0 | 1.0 | 0.0 |
| ACKIOIEG_53 | 0.0 | 1.0 | 0.0 |
| ACKIOIEG_54 | 1.0 | 0.0 | 1.0 |
| ACKIOIEG_55 | 0.0 | 1.0 | 0.0 |
| ACKIOIEG_56 | 0.0 | 1.0 | 0.0 |
| ACKIOIEG_57 | 0.0 | 1.0 | 0.0 |
| ACKIOIEG_58 | 0.0 | 1.0 | 0.0 |
| ACKIOIEG_59 | 0.0 | 1.0 | 0.0 |
| ACKIOIEG_60 | 0.0 | 1.0 | 0.0 |
| ACKIOIEG_62 | 0.0 | 1.0 | 0.0 |
| ACKIOIEG_63 | 1.0 | 0.0 | 1.0 |
| ACKIOIEG_64 | 1.0 | 0.0 | 1.0 |
| ACKIOIEG_66 | 1.0 | 0.0 | 1.0 |
| ACKIOIEG_67 | 1.0 | 0.0 | 1.0 |
| ACKIOIEG_68 | 0.0 | 1.0 | 0.0 |
| ACKIOIEG_69 | 0.0 | 1.0 | 0.0 |
| ACKIOIEG_70 | 0.0 | 1.0 | 0.0 |
| ACKIOIEG_71 | 0.0 | 1.0 | 0.0 |
| ACKIOIEG_72 | 1.0 | 0.0 | 1.0 |
| ACKIOIEG_73 | 1.0 | 0.0 | 1.0 |
| ACKIOIEG_74 | 0.0 | 1.0 | 0.0 |
| ACKIOIEG_75 | 0.0 | 1.0 | 0.0 |
| ACKIOIEG_76 | 0.0 | 1.0 | 0.0 |
| ACKIOIEG_77 | 0.0 | 1.0 | 0.0 |
| ACKIOIEG_78 | 0.0 | 1.0 | 0.0 |
| ACKIOIEG_80 | 0.0 | 1.0 | 0.0 |
| ACKIOIEG_91 | 0.0 | 1.0 | 0.0 |
| ACKIOIEG_102 | 0.0 | 1.0 | 0.0 |
| ACKIOIEG_113 | 0.0 | 1.0 | 0.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| ACKIOIEG_1 | 753962 | 758219 | False | Myoviridae | VOG4552, |
Phigaro v2.4.0 (Database: Jan. 2024 release)