Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 3 | 0 | 0 | 3.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| LEJHEIID_33 | 19179 | 21104 | tet(Q) | ARO:3000191 | tet(Q) | 97.82 | 97.56 | Z21523.1 |
| LEJHEIID_12 | 1670 | 2404 | ErmG | ARO:3000522 | ErmG | 99.18 | 100.00 | L42817.1 |
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| LEJHEIID_12 | 1670 | 2404 | erm(G) | Erythromycin, Lincomycin, Clindamycin, Quinupristin, Pristinamycin IA, Virginiamycin S | 99.32 | 100.00 | M15332 |
| LEJHEIID_33 | 19179 | 21104 | tet(Q) | Doxycycline, Tetracycline, Minocycline | 98.86 | 100.00 | L33696 |
| LEJHEIID_12 | 1 | 898 | msr(D) | Erythromycin, Azithromycin, Telithromycin, Quinupristin, Pristinamycin IA, Virginiamycin S | 97.22 | 61.34 | AF227520 |
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| LEJHEIID_17 | 79997 | 80902 | blaMUN-1 | MUN family extended-spectrum class A beta-lactamase MUN-1 | ALLELEX | 100.00 | 100.00 | WP_206340447.1 |
| LEJHEIID_12 | 1670 | 2401 | erm(G) | 23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(G) | BLASTX | 99.59 | 100.00 | WP_063844791.1 |
| LEJHEIID_33 | 19179 | 21101 | tet(Q) | tetracycline resistance ribosomal protection protein Tet(Q) | BLASTX | 98.44 | 100.00 | WP_063856407.1 |
| LEJHEIID_12 | 2 | 895 | msr(D) | ABC-F type ribosomal protection protein Msr(D) | PARTIAL_CONTIG_ENDX | 96.31 | 61.19 | WP_000420317.1 |
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| No hit found | ||||||
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| LEJHEIID_1 | 0.0 | 1.0 | 0.0 |
| LEJHEIID_2 | 0.0 | 1.0 | 0.0 |
| LEJHEIID_3 | 0.0 | 1.0 | 0.0 |
| LEJHEIID_4 | 0.0 | 1.0 | 0.0 |
| LEJHEIID_5 | 0.0 | 1.0 | 0.0 |
| LEJHEIID_6 | 0.0 | 1.0 | 0.0 |
| LEJHEIID_7 | 0.0 | 1.0 | 0.0 |
| LEJHEIID_8 | 0.0 | 1.0 | 0.0 |
| LEJHEIID_9 | 0.0 | 1.0 | 0.0 |
| LEJHEIID_10 | 0.0 | 1.0 | 0.0 |
| LEJHEIID_11 | 0.0 | 1.0 | 0.0 |
| LEJHEIID_12 | 0.0 | 1.0 | 0.0 |
| LEJHEIID_13 | 0.0 | 1.0 | 0.0 |
| LEJHEIID_14 | 0.0 | 1.0 | 0.0 |
| LEJHEIID_15 | 0.0 | 1.0 | 0.0 |
| LEJHEIID_16 | 0.0 | 1.0 | 0.0 |
| LEJHEIID_17 | 0.0 | 1.0 | 0.0 |
| LEJHEIID_18 | 0.0 | 1.0 | 0.0 |
| LEJHEIID_19 | 0.0 | 1.0 | 0.0 |
| LEJHEIID_20 | 0.0 | 1.0 | 0.0 |
| LEJHEIID_21 | 0.0 | 1.0 | 0.0 |
| LEJHEIID_22 | 0.0 | 1.0 | 0.0 |
| LEJHEIID_23 | 0.0 | 1.0 | 0.0 |
| LEJHEIID_24 | 0.0 | 1.0 | 0.0 |
| LEJHEIID_25 | 0.0 | 1.0 | 0.0 |
| LEJHEIID_26 | 0.0 | 1.0 | 0.0 |
| LEJHEIID_27 | 1.0 | 0.0 | 1.0 |
| LEJHEIID_28 | 0.0 | 1.0 | 0.0 |
| LEJHEIID_29 | 1.0 | 0.0 | 1.0 |
| LEJHEIID_30 | 0.0 | 1.0 | 0.0 |
| LEJHEIID_31 | 1.0 | 0.0 | 1.0 |
| LEJHEIID_32 | 0.0 | 1.0 | 0.0 |
| LEJHEIID_33 | 0.0 | 1.0 | 0.0 |
| LEJHEIID_34 | 0.0 | 1.0 | 0.0 |
| LEJHEIID_35 | 0.0 | 1.0 | 0.0 |
| LEJHEIID_36 | 0.0 | 1.0 | 0.0 |
| LEJHEIID_37 | 1.0 | 0.0 | 1.0 |
| LEJHEIID_38 | 0.0 | 1.0 | 0.0 |
| LEJHEIID_39 | 0.0 | 1.0 | 0.0 |
| LEJHEIID_40 | 1.0 | 0.0 | 1.0 |
| LEJHEIID_41 | 1.0 | 0.0 | 1.0 |
| LEJHEIID_42 | 1.0 | 0.0 | 1.0 |
| LEJHEIID_43 | 1.0 | 0.0 | 1.0 |
| LEJHEIID_45 | 0.0 | 1.0 | 0.0 |
| LEJHEIID_46 | 1.0 | 0.0 | 1.0 |
| LEJHEIID_47 | 1.0 | 0.0 | 1.0 |
| LEJHEIID_48 | 1.0 | 0.0 | 1.0 |
| LEJHEIID_49 | 1.0 | 0.0 | 1.0 |
| LEJHEIID_50 | 1.0 | 0.0 | 1.0 |
| LEJHEIID_52 | 0.0 | 1.0 | 0.0 |
| LEJHEIID_53 | 0.0 | 1.0 | 0.0 |
| LEJHEIID_54 | 1.0 | 0.0 | 1.0 |
| LEJHEIID_55 | 0.0 | 1.0 | 0.0 |
| LEJHEIID_56 | 0.0 | 1.0 | 0.0 |
| LEJHEIID_57 | 1.0 | 0.0 | 1.0 |
| LEJHEIID_67 | 0.0 | 1.0 | 0.0 |
| LEJHEIID_78 | 0.0 | 1.0 | 0.0 |
| LEJHEIID_89 | 0.0 | 1.0 | 0.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| No hit found | |||||
Phigaro v2.4.0 (Database: Jan. 2024 release)