Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 5 | 0 | 0 | 5.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| JKKIHNEO_65 | 64459 | 66384 | tet(Q) | ARO:3000191 | tet(Q) | 97.04 | 97.56 | Z21523.1 |
| JKKIHNEO_78 | 38068 | 39033 | CfxA4 | ARO:3003005 | CfxA4 | 100.00 | 100.00 | AY769933.1 |
| JKKIHNEO_80 | 11659 | 12864 | Mef(En2) | ARO:3004659 | Mef(En2) | 99.50 | 100.00 | AF251288.1 |
| JKKIHNEO_110 | 2350 | 3150 | ErmF | ARO:3000498 | ErmF | 97.74 | 100.00 | M17124.1 |
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| JKKIHNEO_78 | 38068 | 39033 | cfxA4 | Unknown Beta-lactam | 100.00 | 100.00 | AY769933 |
| JKKIHNEO_110 | 2350 | 3150 | erm(F) | Erythromycin, Lincomycin, Clindamycin, Quinupristin, Pristinamycin IA, Virginiamycin S | 99.88 | 100.00 | M62487 |
| JKKIHNEO_65 | 64459 | 66384 | tet(Q) | Doxycycline, Tetracycline, Minocycline | 97.25 | 100.00 | X58717 |
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| JKKIHNEO_78 | 38068 | 39030 | cfxA4 | extended-spectrum class A beta-lactamase CfxA4 | EXACTX | 100.00 | 100.00 | WP_057280848.1 |
| JKKIHNEO_80 | 11125 | 11634 | lnu(AN2) | lincosamide nucleotidyltransferase Lnu(AN2) | EXACTX | 100.00 | 100.00 | WP_004308783.1 |
| JKKIHNEO_110 | 2350 | 3147 | erm(F) | 23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(F) | BLASTX | 99.62 | 100.00 | WP_063844771.1 |
| JKKIHNEO_80 | 11662 | 12864 | mef(En2) | macrolide efflux MFS transporter Mef(En2) | BLASTX | 99.50 | 100.00 | WP_063853729.1 |
| JKKIHNEO_65 | 64459 | 66381 | tet(Q) | tetracycline resistance ribosomal protection protein Tet(Q) | BLASTX | 97.82 | 100.00 | WP_004293868.1 |
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| No hit found | ||||||
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| JKKIHNEO_1 | 0.0 | 1.0 | 0.0 |
| JKKIHNEO_2 | 0.0 | 1.0 | 0.0 |
| JKKIHNEO_3 | 1.0 | 0.0 | 1.0 |
| JKKIHNEO_4 | 1.0 | 0.0 | 1.0 |
| JKKIHNEO_5 | 1.0 | 0.0 | 1.0 |
| JKKIHNEO_7 | 1.0 | 0.0 | 1.0 |
| JKKIHNEO_8 | 1.0 | 0.0 | 1.0 |
| JKKIHNEO_9 | 1.0 | 0.0 | 1.0 |
| JKKIHNEO_10 | 1.0 | 0.0 | 1.0 |
| JKKIHNEO_11 | 1.0 | 0.0 | 1.0 |
| JKKIHNEO_13 | 0.0 | 1.0 | 0.0 |
| JKKIHNEO_24 | 0.0 | 1.0 | 0.0 |
| JKKIHNEO_35 | 0.0 | 1.0 | 0.0 |
| JKKIHNEO_46 | 0.0 | 1.0 | 0.0 |
| JKKIHNEO_52 | 0.0 | 1.0 | 0.0 |
| JKKIHNEO_53 | 0.0 | 1.0 | 0.0 |
| JKKIHNEO_54 | 0.0 | 1.0 | 0.0 |
| JKKIHNEO_55 | 0.0 | 1.0 | 0.0 |
| JKKIHNEO_56 | 0.0 | 1.0 | 0.0 |
| JKKIHNEO_57 | 0.0 | 1.0 | 0.0 |
| JKKIHNEO_58 | 0.0 | 1.0 | 0.0 |
| JKKIHNEO_59 | 0.0 | 1.0 | 0.0 |
| JKKIHNEO_60 | 0.0 | 1.0 | 0.0 |
| JKKIHNEO_61 | 0.0 | 1.0 | 0.0 |
| JKKIHNEO_62 | 0.0 | 1.0 | 0.0 |
| JKKIHNEO_63 | 0.0 | 1.0 | 0.0 |
| JKKIHNEO_64 | 0.0 | 1.0 | 0.0 |
| JKKIHNEO_65 | 0.0 | 1.0 | 0.0 |
| JKKIHNEO_66 | 0.0 | 1.0 | 0.0 |
| JKKIHNEO_67 | 0.0 | 1.0 | 0.0 |
| JKKIHNEO_68 | 0.0 | 1.0 | 0.0 |
| JKKIHNEO_69 | 0.0 | 1.0 | 0.0 |
| JKKIHNEO_70 | 0.0 | 1.0 | 0.0 |
| JKKIHNEO_71 | 0.0 | 1.0 | 0.0 |
| JKKIHNEO_72 | 0.0 | 1.0 | 0.0 |
| JKKIHNEO_73 | 0.0 | 1.0 | 0.0 |
| JKKIHNEO_74 | 0.0 | 1.0 | 0.0 |
| JKKIHNEO_75 | 0.0 | 1.0 | 0.0 |
| JKKIHNEO_76 | 0.0 | 1.0 | 0.0 |
| JKKIHNEO_77 | 0.0 | 1.0 | 0.0 |
| JKKIHNEO_78 | 0.0 | 1.0 | 0.0 |
| JKKIHNEO_79 | 0.0 | 1.0 | 0.0 |
| JKKIHNEO_80 | 0.0 | 1.0 | 0.0 |
| JKKIHNEO_81 | 0.0 | 1.0 | 0.0 |
| JKKIHNEO_82 | 0.0 | 1.0 | 0.0 |
| JKKIHNEO_83 | 0.0 | 1.0 | 0.0 |
| JKKIHNEO_84 | 0.0 | 1.0 | 0.0 |
| JKKIHNEO_85 | 0.0 | 1.0 | 0.0 |
| JKKIHNEO_86 | 0.0 | 1.0 | 0.0 |
| JKKIHNEO_87 | 1.0 | 0.0 | 1.0 |
| JKKIHNEO_88 | 0.0 | 1.0 | 0.0 |
| JKKIHNEO_89 | 0.0 | 1.0 | 0.0 |
| JKKIHNEO_90 | 0.0 | 1.0 | 0.0 |
| JKKIHNEO_91 | 0.0 | 1.0 | 0.0 |
| JKKIHNEO_92 | 0.0 | 1.0 | 0.0 |
| JKKIHNEO_93 | 0.0 | 1.0 | 0.0 |
| JKKIHNEO_94 | 0.0 | 1.0 | 0.0 |
| JKKIHNEO_95 | 1.0 | 0.0 | 1.0 |
| JKKIHNEO_96 | 0.0 | 1.0 | 0.0 |
| JKKIHNEO_97 | 0.0 | 1.0 | 0.0 |
| JKKIHNEO_98 | 0.0 | 1.0 | 0.0 |
| JKKIHNEO_99 | 0.0 | 1.0 | 0.0 |
| JKKIHNEO_100 | 0.0 | 1.0 | 0.0 |
| JKKIHNEO_101 | 0.0 | 1.0 | 0.0 |
| JKKIHNEO_102 | 0.0 | 1.0 | 0.0 |
| JKKIHNEO_103 | 0.0 | 1.0 | 0.0 |
| JKKIHNEO_104 | 1.0 | 0.0 | 1.0 |
| JKKIHNEO_105 | 1.0 | 0.0 | 1.0 |
| JKKIHNEO_106 | 0.0 | 1.0 | 0.0 |
| JKKIHNEO_107 | 0.0 | 1.0 | 0.0 |
| JKKIHNEO_108 | 1.0 | 0.0 | 1.0 |
| JKKIHNEO_109 | 1.0 | 0.0 | 1.0 |
| JKKIHNEO_110 | 1.0 | 0.0 | 1.0 |
| JKKIHNEO_111 | 1.0 | 0.0 | 1.0 |
| JKKIHNEO_112 | 0.0 | 1.0 | 0.0 |
| JKKIHNEO_113 | 1.0 | 0.0 | 1.0 |
| JKKIHNEO_114 | 0.0 | 1.0 | 0.0 |
| JKKIHNEO_115 | 1.0 | 0.0 | 1.0 |
| JKKIHNEO_116 | 0.0 | 1.0 | 0.0 |
| JKKIHNEO_117 | 1.0 | 0.0 | 1.0 |
| JKKIHNEO_118 | 1.0 | 0.0 | 1.0 |
| JKKIHNEO_119 | 0.0 | 1.0 | 0.0 |
| JKKIHNEO_120 | 1.0 | 0.0 | 1.0 |
| JKKIHNEO_121 | 1.0 | 0.0 | 1.0 |
| JKKIHNEO_122 | 0.0 | 1.0 | 0.0 |
| JKKIHNEO_123 | 0.0 | 1.0 | 0.0 |
| JKKIHNEO_124 | 1.0 | 0.0 | 1.0 |
| JKKIHNEO_125 | 1.0 | 0.0 | 1.0 |
| JKKIHNEO_126 | 1.0 | 0.0 | 1.0 |
| JKKIHNEO_127 | 0.0 | 1.0 | 0.0 |
| JKKIHNEO_128 | 1.0 | 0.0 | 1.0 |
| JKKIHNEO_130 | 1.0 | 0.0 | 1.0 |
| JKKIHNEO_131 | 1.0 | 0.0 | 1.0 |
| JKKIHNEO_132 | 0.0 | 1.0 | 0.0 |
| JKKIHNEO_133 | 1.0 | 0.0 | 1.0 |
| JKKIHNEO_134 | 0.0 | 1.0 | 0.0 |
| JKKIHNEO_135 | 0.0 | 1.0 | 0.0 |
| JKKIHNEO_136 | 1.0 | 0.0 | 1.0 |
| JKKIHNEO_137 | 1.0 | 0.0 | 1.0 |
| JKKIHNEO_138 | 1.0 | 0.0 | 1.0 |
| JKKIHNEO_139 | 1.0 | 0.0 | 1.0 |
| JKKIHNEO_140 | 1.0 | 0.0 | 1.0 |
| JKKIHNEO_141 | 0.0 | 1.0 | 0.0 |
| JKKIHNEO_142 | 0.0 | 1.0 | 0.0 |
| JKKIHNEO_143 | 1.0 | 0.0 | 1.0 |
| JKKIHNEO_144 | 0.0 | 1.0 | 0.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| No hit found | |||||
Phigaro v2.4.0 (Database: Jan. 2024 release)