Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 4 | 0 | 0 | 4.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| HNAKIJJP_90 | 209166 | 209978 | ErmF | ARO:3000498 | ErmF | 98.50 | 101.50 | M17124.1 |
| HNAKIJJP_90 | 206954 | 208879 | tet(Q) | ARO:3000191 | tet(Q) | 89.08 | 97.56 | Z21523.1 |
| HNAKIJJP_51 | 31474 | 33447 | tet(Q) | ARO:3000191 | tet(Q) | 96.35 | 100.00 | Z21523.1 |
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| HNAKIJJP_51 | 31474 | 33399 | tet(Q) | Doxycycline, Tetracycline, Minocycline | 99.84 | 100.00 | L33696 |
| HNAKIJJP_90 | 209166 | 209966 | erm(F) | Erythromycin, Lincomycin, Clindamycin, Quinupristin, Pristinamycin IA, Virginiamycin S | 99.50 | 100.00 | M17808 |
| HNAKIJJP_77 | 6 | 956 | cfxA4 | Unknown Beta-lactam | 86.01 | 98.34 | AY769933 |
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| HNAKIJJP_51 | 31477 | 33399 | tet(Q) | tetracycline resistance ribosomal protection protein Tet(Q) | BLASTX | 99.53 | 100.00 | WP_063856407.1 |
| HNAKIJJP_90 | 209169 | 209966 | erm(F) | 23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(F) | BLASTX | 98.87 | 100.00 | WP_002682030.1 |
| HNAKIJJP_90 | 206957 | 208879 | tet(Q) | tetracycline resistance ribosomal protection protein Tet(Q) | BLASTX | 89.55 | 100.00 | WP_063856407.1 |
| HNAKIJJP_77 | 4 | 957 | cfxA | CfxA family broad-spectrum class A beta-lactamase | BLASTX | 83.33 | 99.07 | WP_004339683.1 |
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| HNAKIJJP_89 | 124 | 704 | repUS2 | 584 / 681 | 80.48 | BFU30316 |
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| HNAKIJJP_1 | 0.0 | 1.0 | 0.0 |
| HNAKIJJP_2 | 0.0 | 1.0 | 0.0 |
| HNAKIJJP_13 | 0.0 | 1.0 | 0.0 |
| HNAKIJJP_24 | 0.0 | 1.0 | 0.0 |
| HNAKIJJP_28 | 0.0 | 1.0 | 0.0 |
| HNAKIJJP_29 | 0.0 | 1.0 | 0.0 |
| HNAKIJJP_30 | 0.0 | 1.0 | 0.0 |
| HNAKIJJP_31 | 0.0 | 1.0 | 0.0 |
| HNAKIJJP_32 | 0.0 | 1.0 | 0.0 |
| HNAKIJJP_33 | 0.0 | 1.0 | 0.0 |
| HNAKIJJP_34 | 0.0 | 1.0 | 0.0 |
| HNAKIJJP_35 | 0.0 | 1.0 | 0.0 |
| HNAKIJJP_36 | 0.0 | 1.0 | 0.0 |
| HNAKIJJP_37 | 0.0 | 1.0 | 0.0 |
| HNAKIJJP_38 | 0.0 | 1.0 | 0.0 |
| HNAKIJJP_39 | 0.0 | 1.0 | 0.0 |
| HNAKIJJP_40 | 0.0 | 1.0 | 0.0 |
| HNAKIJJP_41 | 0.0 | 1.0 | 0.0 |
| HNAKIJJP_42 | 0.0 | 1.0 | 0.0 |
| HNAKIJJP_43 | 0.0 | 1.0 | 0.0 |
| HNAKIJJP_44 | 0.0 | 1.0 | 0.0 |
| HNAKIJJP_45 | 0.0 | 1.0 | 0.0 |
| HNAKIJJP_46 | 0.0 | 1.0 | 0.0 |
| HNAKIJJP_47 | 0.0 | 1.0 | 0.0 |
| HNAKIJJP_48 | 0.0 | 1.0 | 0.0 |
| HNAKIJJP_49 | 0.0 | 1.0 | 0.0 |
| HNAKIJJP_50 | 0.0 | 1.0 | 0.0 |
| HNAKIJJP_51 | 0.0 | 1.0 | 0.0 |
| HNAKIJJP_52 | 0.0 | 1.0 | 0.0 |
| HNAKIJJP_53 | 0.0 | 1.0 | 0.0 |
| HNAKIJJP_54 | 0.0 | 1.0 | 0.0 |
| HNAKIJJP_55 | 0.0 | 1.0 | 0.0 |
| HNAKIJJP_56 | 1.0 | 0.0 | 1.0 |
| HNAKIJJP_57 | 0.0 | 1.0 | 0.0 |
| HNAKIJJP_58 | 1.0 | 0.0 | 1.0 |
| HNAKIJJP_59 | 0.0 | 1.0 | 0.0 |
| HNAKIJJP_60 | 0.0 | 1.0 | 0.0 |
| HNAKIJJP_61 | 0.0 | 1.0 | 0.0 |
| HNAKIJJP_62 | 0.0 | 1.0 | 0.0 |
| HNAKIJJP_63 | 1.0 | 0.0 | 1.0 |
| HNAKIJJP_64 | 0.0 | 1.0 | 0.0 |
| HNAKIJJP_65 | 0.0 | 1.0 | 0.0 |
| HNAKIJJP_66 | 0.0 | 1.0 | 0.0 |
| HNAKIJJP_67 | 1.0 | 0.0 | 1.0 |
| HNAKIJJP_68 | 0.0 | 1.0 | 0.0 |
| HNAKIJJP_69 | 0.0 | 1.0 | 0.0 |
| HNAKIJJP_70 | 0.0 | 1.0 | 0.0 |
| HNAKIJJP_71 | 0.0 | 1.0 | 0.0 |
| HNAKIJJP_72 | 0.0 | 1.0 | 0.0 |
| HNAKIJJP_73 | 1.0 | 0.0 | 1.0 |
| HNAKIJJP_74 | 0.0 | 1.0 | 0.0 |
| HNAKIJJP_75 | 0.0 | 1.0 | 0.0 |
| HNAKIJJP_76 | 1.0 | 0.0 | 1.0 |
| HNAKIJJP_77 | 0.0 | 1.0 | 0.0 |
| HNAKIJJP_78 | 0.0 | 1.0 | 0.0 |
| HNAKIJJP_79 | 0.0 | 1.0 | 0.0 |
| HNAKIJJP_80 | 1.0 | 0.0 | 1.0 |
| HNAKIJJP_81 | 1.0 | 0.0 | 1.0 |
| HNAKIJJP_82 | 1.0 | 0.0 | 1.0 |
| HNAKIJJP_83 | 0.0 | 1.0 | 0.0 |
| HNAKIJJP_84 | 1.0 | 0.0 | 1.0 |
| HNAKIJJP_85 | 0.0 | 1.0 | 0.0 |
| HNAKIJJP_87 | 0.0 | 1.0 | 0.0 |
| HNAKIJJP_88 | 0.0 | 1.0 | 0.0 |
| HNAKIJJP_89 | 1.0 | 0.0 | 1.0 |
| HNAKIJJP_90 | 0.0 | 1.0 | 0.0 |
| HNAKIJJP_91 | 1.0 | 0.0 | 1.0 |
| HNAKIJJP_92 | 1.0 | 0.0 | 1.0 |
| HNAKIJJP_93 | 1.0 | 0.0 | 1.0 |
| HNAKIJJP_94 | 1.0 | 0.0 | 1.0 |
| HNAKIJJP_95 | 1.0 | 0.0 | 1.0 |
| HNAKIJJP_96 | 0.0 | 1.0 | 0.0 |
| HNAKIJJP_97 | 1.0 | 0.0 | 1.0 |
| HNAKIJJP_98 | 0.0 | 1.0 | 0.0 |
| HNAKIJJP_100 | 0.0 | 1.0 | 0.0 |
| HNAKIJJP_101 | 0.0 | 1.0 | 0.0 |
| HNAKIJJP_102 | 1.0 | 0.0 | 1.0 |
| HNAKIJJP_103 | 1.0 | 0.0 | 1.0 |
| HNAKIJJP_104 | 1.0 | 0.0 | 1.0 |
| HNAKIJJP_105 | 1.0 | 0.0 | 1.0 |
| HNAKIJJP_106 | 1.0 | 0.0 | 1.0 |
| HNAKIJJP_107 | 1.0 | 0.0 | 1.0 |
| HNAKIJJP_108 | 1.0 | 0.0 | 1.0 |
| HNAKIJJP_109 | 0.0 | 1.0 | 0.0 |
| HNAKIJJP_110 | 1.0 | 0.0 | 1.0 |
| HNAKIJJP_111 | 0.0 | 1.0 | 0.0 |
| HNAKIJJP_112 | 0.0 | 1.0 | 0.0 |
| HNAKIJJP_113 | 0.0 | 1.0 | 0.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| No hit found | |||||
Phigaro v2.4.0 (Database: Jan. 2024 release)