Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 0 | 0 | 2 | 2.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| No hit found | |||||||
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| HCGBMBPK_90 | 9032 | 9736 | WalR | 1.17e-115 | transcriptional regulatory protein | 84.25 | 100.00 | EPH95667 |
| HCGBMBPK_77 | 111103 | 110909 | CspR | 7.06e-30 | cold shock protein | 84.61 | 98.48 | AAO82613 |
| HCGBMBPK_77 | 111103 | 110906 | CspA | 1.08e-29 | cold shock protein | 84.85 | 100.00 | CAA62903 |
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| HCGBMBPK_111 | 7862 | 8685 | rep38 | 824 / 903 | 96.00 | CP005943 |
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| HCGBMBPK_1 | 0.0 | 1.0 | 0.0 |
| HCGBMBPK_2 | 0.0 | 1.0 | 0.0 |
| HCGBMBPK_3 | 1.0 | 0.0 | 1.0 |
| HCGBMBPK_4 | 1.0 | 0.0 | 1.0 |
| HCGBMBPK_5 | 1.0 | 0.0 | 1.0 |
| HCGBMBPK_6 | 1.0 | 0.0 | 1.0 |
| HCGBMBPK_7 | 1.0 | 0.0 | 1.0 |
| HCGBMBPK_13 | 0.0 | 1.0 | 0.0 |
| HCGBMBPK_24 | 0.0 | 1.0 | 0.0 |
| HCGBMBPK_35 | 0.0 | 1.0 | 0.0 |
| HCGBMBPK_46 | 0.0 | 1.0 | 0.0 |
| HCGBMBPK_57 | 0.0 | 1.0 | 0.0 |
| HCGBMBPK_62 | 0.0 | 1.0 | 0.0 |
| HCGBMBPK_63 | 0.0 | 1.0 | 0.0 |
| HCGBMBPK_64 | 0.0 | 1.0 | 0.0 |
| HCGBMBPK_65 | 0.0 | 1.0 | 0.0 |
| HCGBMBPK_66 | 0.0 | 1.0 | 0.0 |
| HCGBMBPK_67 | 0.0 | 1.0 | 0.0 |
| HCGBMBPK_68 | 0.0 | 1.0 | 0.0 |
| HCGBMBPK_69 | 0.0 | 1.0 | 0.0 |
| HCGBMBPK_70 | 0.0 | 1.0 | 0.0 |
| HCGBMBPK_71 | 0.0 | 1.0 | 0.0 |
| HCGBMBPK_72 | 0.0 | 1.0 | 0.0 |
| HCGBMBPK_73 | 0.0 | 1.0 | 0.0 |
| HCGBMBPK_74 | 1.0 | 0.0 | 1.0 |
| HCGBMBPK_75 | 0.0 | 1.0 | 0.0 |
| HCGBMBPK_76 | 0.0 | 1.0 | 0.0 |
| HCGBMBPK_77 | 0.0 | 1.0 | 0.0 |
| HCGBMBPK_78 | 0.0 | 1.0 | 0.0 |
| HCGBMBPK_79 | 1.0 | 0.0 | 1.0 |
| HCGBMBPK_80 | 0.0 | 1.0 | 0.0 |
| HCGBMBPK_81 | 0.0 | 1.0 | 0.0 |
| HCGBMBPK_82 | 0.0 | 1.0 | 0.0 |
| HCGBMBPK_83 | 0.0 | 1.0 | 0.0 |
| HCGBMBPK_84 | 0.0 | 1.0 | 0.0 |
| HCGBMBPK_85 | 0.0 | 1.0 | 0.0 |
| HCGBMBPK_86 | 0.0 | 1.0 | 0.0 |
| HCGBMBPK_87 | 0.0 | 1.0 | 0.0 |
| HCGBMBPK_88 | 0.0 | 1.0 | 0.0 |
| HCGBMBPK_89 | 0.0 | 1.0 | 0.0 |
| HCGBMBPK_90 | 0.0 | 1.0 | 0.0 |
| HCGBMBPK_91 | 0.0 | 1.0 | 0.0 |
| HCGBMBPK_92 | 0.0 | 1.0 | 0.0 |
| HCGBMBPK_93 | 0.0 | 1.0 | 0.0 |
| HCGBMBPK_94 | 1.0 | 0.0 | 1.0 |
| HCGBMBPK_95 | 0.0 | 1.0 | 0.0 |
| HCGBMBPK_96 | 0.0 | 1.0 | 0.0 |
| HCGBMBPK_97 | 0.0 | 1.0 | 0.0 |
| HCGBMBPK_98 | 1.0 | 0.0 | 1.0 |
| HCGBMBPK_99 | 0.0 | 1.0 | 0.0 |
| HCGBMBPK_100 | 1.0 | 0.0 | 1.0 |
| HCGBMBPK_101 | 0.0 | 1.0 | 0.0 |
| HCGBMBPK_102 | 0.0 | 1.0 | 0.0 |
| HCGBMBPK_103 | 0.0 | 1.0 | 0.0 |
| HCGBMBPK_104 | 1.0 | 0.0 | 1.0 |
| HCGBMBPK_105 | 0.0 | 1.0 | 0.0 |
| HCGBMBPK_106 | 0.0 | 1.0 | 0.0 |
| HCGBMBPK_107 | 1.0 | 0.0 | 1.0 |
| HCGBMBPK_108 | 1.0 | 0.0 | 1.0 |
| HCGBMBPK_109 | 1.0 | 0.0 | 1.0 |
| HCGBMBPK_110 | 0.0 | 1.0 | 0.0 |
| HCGBMBPK_111 | 1.0 | 0.0 | 1.0 |
| HCGBMBPK_112 | 1.0 | 0.0 | 1.0 |
| HCGBMBPK_113 | 1.0 | 0.0 | 1.0 |
| HCGBMBPK_114 | 0.0 | 1.0 | 0.0 |
| HCGBMBPK_115 | 1.0 | 0.0 | 1.0 |
| HCGBMBPK_116 | 0.0 | 1.0 | 0.0 |
| HCGBMBPK_117 | 1.0 | 0.0 | 1.0 |
| HCGBMBPK_118 | 1.0 | 0.0 | 1.0 |
| HCGBMBPK_119 | 0.0 | 1.0 | 0.0 |
| HCGBMBPK_120 | 1.0 | 0.0 | 1.0 |
| HCGBMBPK_121 | 0.0 | 1.0 | 0.0 |
| HCGBMBPK_122 | 0.0 | 1.0 | 0.0 |
| HCGBMBPK_123 | 1.0 | 0.0 | 1.0 |
| HCGBMBPK_124 | 1.0 | 0.0 | 1.0 |
| HCGBMBPK_125 | 1.0 | 0.0 | 1.0 |
| HCGBMBPK_126 | 1.0 | 0.0 | 1.0 |
| HCGBMBPK_127 | 1.0 | 0.0 | 1.0 |
| HCGBMBPK_128 | 1.0 | 0.0 | 1.0 |
| HCGBMBPK_129 | 1.0 | 0.0 | 1.0 |
| HCGBMBPK_130 | 1.0 | 0.0 | 1.0 |
| HCGBMBPK_131 | 1.0 | 0.0 | 1.0 |
| HCGBMBPK_132 | 0.0 | 1.0 | 0.0 |
| HCGBMBPK_133 | 1.0 | 0.0 | 1.0 |
| HCGBMBPK_134 | 1.0 | 0.0 | 1.0 |
| HCGBMBPK_136 | 1.0 | 0.0 | 1.0 |
| HCGBMBPK_137 | 1.0 | 0.0 | 1.0 |
| HCGBMBPK_138 | 1.0 | 0.0 | 1.0 |
| HCGBMBPK_139 | 1.0 | 0.0 | 1.0 |
| HCGBMBPK_140 | 0.0 | 1.0 | 0.0 |
| HCGBMBPK_141 | 1.0 | 0.0 | 1.0 |
| HCGBMBPK_142 | 1.0 | 0.0 | 1.0 |
| HCGBMBPK_143 | 0.0 | 1.0 | 0.0 |
| HCGBMBPK_144 | 1.0 | 0.0 | 1.0 |
| HCGBMBPK_145 | 1.0 | 0.0 | 1.0 |
| HCGBMBPK_146 | 1.0 | 0.0 | 1.0 |
| HCGBMBPK_148 | 1.0 | 0.0 | 1.0 |
| HCGBMBPK_149 | 0.0 | 1.0 | 0.0 |
| HCGBMBPK_150 | 1.0 | 0.0 | 1.0 |
| HCGBMBPK_151 | 1.0 | 0.0 | 1.0 |
| HCGBMBPK_152 | 1.0 | 0.0 | 1.0 |
| HCGBMBPK_153 | 1.0 | 0.0 | 1.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| HCGBMBPK_76 | 6147 | 12901 | False | Siphoviridae | VOG4544, VOG4581, VOG4841, VOG0205, VOG4609 |
| HCGBMBPK_88 | 1377 | 27388 | False | Siphoviridae | VOG10972, VOG4599, VOG4605, VOG4605, VOG5904, VOG0660, VOG0209, VOG4586, VOG0207, VOG0205, VOG0204, VOG4553, VOG4573, VOG4556, VOG0202, VOG1886, VOG4581, VOG4841, VOG4571, VOG4571, VOG0198, VOG1049, VOG3643, VOG0044, VOG10015, VOG6140, VOG4693, VOG11024 |
| HCGBMBPK_90 | 1918 | 8112 | False | Siphoviridae | VOG4581, VOG4544, VOG5051, VOG4556, VOG4568, VOG0204, VOG0198 |
| HCGBMBPK_143 | 8846 | 14802 | False | Siphoviridae | VOG4602, VOG6495, VOG6495, VOG6139, VOG8615, VOG3549, VOG0650, VOG0535 |
| HCGBMBPK_143 | 16622 | 42099 | False | Siphoviridae | VOG0044, VOG3643, VOG0198, VOG3015, VOG5616, VOG0796, VOG4544, VOG0691, VOG0692, VOG4555, VOG4572, VOG0695, VOG0696, VOG0697, VOG0698, VOG9763, VOG0701, VOG4910, VOG0801, VOG4619, VOG9531, VOG5008 |
Phigaro v2.4.0 (Database: Jan. 2024 release)