Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 2 | 0 | 2 | 2.83 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| MBGJLMLK_75 | 55376 | 57301 | tet(M) | ARO:3000186 | tet(M) | 98.28 | 100.31 | AB039845.1 |
| MBGJLMLK_106 | 4954 | 5817 | ANT(6)-Ia | ARO:3002626 | ANT(6)-Ia | 100.00 | 100.00 | KF648874.1 |
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| MBGJLMLK_106 | 4954 | 5817 | ant(6)-Ia | Streptomycin | 100.00 | 100.00 | KF421157 |
| MBGJLMLK_75 | 55376 | 57301 | tet(M) | Doxycycline, Tetracycline, Minocycline | 99.38 | 100.00 | AM990992 |
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| MBGJLMLK_106 | 4954 | 5814 | ant(6)-Ia | aminoglycoside nucleotidyltransferase ANT(6)-Ia | EXACTX | 100.00 | 100.00 | WP_002294505.1 |
| MBGJLMLK_75 | 55379 | 57301 | tet(M) | tetracycline resistance ribosomal protection protein Tet(M) | BLASTX | 99.06 | 100.00 | WP_000691736.1 |
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| MBGJLMLK_61 | 20153 | 19446 | WalR | 9.20e-117 | transcriptional regulatory protein | 85.59 | 100.43 | EPH95667 |
| MBGJLMLK_65 | 20658 | 20855 | CspR | 3.97e-29 | cold shock protein | 81.82 | 100.00 | AAO82613 |
| MBGJLMLK_65 | 20658 | 20852 | CspA | 1.94e-28 | cold shock protein | 81.54 | 98.48 | CAA62903 |
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| MBGJLMLK_75 | 65575 | 66780 | repUS43 | 1206 / 1206 | 100.00 | CP003584 |
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| MBGJLMLK_1 | 1.0 | 0.0 | 1.0 |
| MBGJLMLK_2 | 1.0 | 0.0 | 1.0 |
| MBGJLMLK_3 | 1.0 | 0.0 | 1.0 |
| MBGJLMLK_4 | 1.0 | 0.0 | 1.0 |
| MBGJLMLK_5 | 0.0 | 1.0 | 0.0 |
| MBGJLMLK_11 | 0.0 | 1.0 | 0.0 |
| MBGJLMLK_22 | 0.0 | 1.0 | 0.0 |
| MBGJLMLK_33 | 0.0 | 1.0 | 0.0 |
| MBGJLMLK_44 | 0.0 | 1.0 | 0.0 |
| MBGJLMLK_47 | 0.0 | 1.0 | 0.0 |
| MBGJLMLK_48 | 0.0 | 1.0 | 0.0 |
| MBGJLMLK_49 | 0.0 | 1.0 | 0.0 |
| MBGJLMLK_50 | 0.0 | 1.0 | 0.0 |
| MBGJLMLK_51 | 0.0 | 1.0 | 0.0 |
| MBGJLMLK_52 | 0.0 | 1.0 | 0.0 |
| MBGJLMLK_53 | 0.0 | 1.0 | 0.0 |
| MBGJLMLK_54 | 0.0 | 1.0 | 0.0 |
| MBGJLMLK_55 | 1.0 | 0.0 | 1.0 |
| MBGJLMLK_56 | 0.0 | 1.0 | 0.0 |
| MBGJLMLK_57 | 0.0 | 1.0 | 0.0 |
| MBGJLMLK_58 | 0.0 | 1.0 | 0.0 |
| MBGJLMLK_59 | 0.0 | 1.0 | 0.0 |
| MBGJLMLK_60 | 0.0 | 1.0 | 0.0 |
| MBGJLMLK_61 | 0.0 | 1.0 | 0.0 |
| MBGJLMLK_62 | 0.0 | 1.0 | 0.0 |
| MBGJLMLK_63 | 0.0 | 1.0 | 0.0 |
| MBGJLMLK_64 | 1.0 | 0.0 | 1.0 |
| MBGJLMLK_65 | 0.0 | 1.0 | 0.0 |
| MBGJLMLK_66 | 0.0 | 1.0 | 0.0 |
| MBGJLMLK_67 | 0.0 | 1.0 | 0.0 |
| MBGJLMLK_68 | 1.0 | 0.0 | 1.0 |
| MBGJLMLK_69 | 0.0 | 1.0 | 0.0 |
| MBGJLMLK_70 | 0.0 | 1.0 | 0.0 |
| MBGJLMLK_71 | 0.0 | 1.0 | 0.0 |
| MBGJLMLK_72 | 0.0 | 1.0 | 0.0 |
| MBGJLMLK_73 | 0.0 | 1.0 | 0.0 |
| MBGJLMLK_74 | 0.0 | 1.0 | 0.0 |
| MBGJLMLK_75 | 0.0 | 1.0 | 0.0 |
| MBGJLMLK_76 | 0.0 | 1.0 | 0.0 |
| MBGJLMLK_77 | 0.0 | 1.0 | 0.0 |
| MBGJLMLK_78 | 0.0 | 1.0 | 0.0 |
| MBGJLMLK_79 | 1.0 | 0.0 | 1.0 |
| MBGJLMLK_80 | 0.0 | 1.0 | 0.0 |
| MBGJLMLK_81 | 0.0 | 1.0 | 0.0 |
| MBGJLMLK_82 | 0.0 | 1.0 | 0.0 |
| MBGJLMLK_83 | 0.0 | 1.0 | 0.0 |
| MBGJLMLK_84 | 0.0 | 1.0 | 0.0 |
| MBGJLMLK_85 | 0.0 | 1.0 | 0.0 |
| MBGJLMLK_86 | 0.0 | 1.0 | 0.0 |
| MBGJLMLK_87 | 1.0 | 0.0 | 1.0 |
| MBGJLMLK_88 | 1.0 | 0.0 | 1.0 |
| MBGJLMLK_89 | 0.0 | 1.0 | 0.0 |
| MBGJLMLK_90 | 0.0 | 1.0 | 0.0 |
| MBGJLMLK_91 | 0.0 | 1.0 | 0.0 |
| MBGJLMLK_92 | 0.0 | 1.0 | 0.0 |
| MBGJLMLK_93 | 1.0 | 0.0 | 1.0 |
| MBGJLMLK_94 | 0.0 | 1.0 | 0.0 |
| MBGJLMLK_95 | 0.0 | 1.0 | 0.0 |
| MBGJLMLK_96 | 0.0 | 1.0 | 0.0 |
| MBGJLMLK_97 | 1.0 | 0.0 | 1.0 |
| MBGJLMLK_98 | 0.0 | 1.0 | 0.0 |
| MBGJLMLK_99 | 1.0 | 0.0 | 1.0 |
| MBGJLMLK_100 | 1.0 | 0.0 | 1.0 |
| MBGJLMLK_101 | 0.0 | 1.0 | 0.0 |
| MBGJLMLK_102 | 0.0 | 1.0 | 0.0 |
| MBGJLMLK_103 | 0.0 | 1.0 | 0.0 |
| MBGJLMLK_104 | 0.0 | 1.0 | 0.0 |
| MBGJLMLK_105 | 1.0 | 0.0 | 1.0 |
| MBGJLMLK_106 | 1.0 | 0.0 | 1.0 |
| MBGJLMLK_107 | 0.0 | 1.0 | 0.0 |
| MBGJLMLK_108 | 1.0 | 0.0 | 1.0 |
| MBGJLMLK_109 | 0.0 | 1.0 | 0.0 |
| MBGJLMLK_110 | 0.0 | 1.0 | 0.0 |
| MBGJLMLK_111 | 0.0 | 1.0 | 0.0 |
| MBGJLMLK_112 | 1.0 | 0.0 | 1.0 |
| MBGJLMLK_113 | 1.0 | 0.0 | 1.0 |
| MBGJLMLK_114 | 1.0 | 0.0 | 1.0 |
| MBGJLMLK_115 | 0.0 | 1.0 | 0.0 |
| MBGJLMLK_116 | 0.0 | 1.0 | 0.0 |
| MBGJLMLK_117 | 1.0 | 0.0 | 1.0 |
| MBGJLMLK_118 | 0.0 | 1.0 | 0.0 |
| MBGJLMLK_119 | 0.0 | 1.0 | 0.0 |
| MBGJLMLK_120 | 0.0 | 1.0 | 0.0 |
| MBGJLMLK_121 | 0.0 | 1.0 | 0.0 |
| MBGJLMLK_122 | 0.0 | 1.0 | 0.0 |
| MBGJLMLK_123 | 0.0 | 1.0 | 0.0 |
| MBGJLMLK_124 | 0.0 | 1.0 | 0.0 |
| MBGJLMLK_125 | 0.0 | 1.0 | 0.0 |
| MBGJLMLK_126 | 1.0 | 0.0 | 1.0 |
| MBGJLMLK_127 | 1.0 | 0.0 | 1.0 |
| MBGJLMLK_128 | 0.0 | 1.0 | 0.0 |
| MBGJLMLK_129 | 1.0 | 0.0 | 1.0 |
| MBGJLMLK_130 | 0.0 | 1.0 | 0.0 |
| MBGJLMLK_131 | 0.0 | 1.0 | 0.0 |
| MBGJLMLK_132 | 1.0 | 0.0 | 1.0 |
| MBGJLMLK_134 | 1.0 | 0.0 | 1.0 |
| MBGJLMLK_136 | 1.0 | 0.0 | 1.0 |
| MBGJLMLK_137 | 0.0 | 1.0 | 0.0 |
| MBGJLMLK_138 | 1.0 | 0.0 | 1.0 |
| MBGJLMLK_140 | 1.0 | 0.0 | 1.0 |
| MBGJLMLK_141 | 0.0 | 1.0 | 0.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| MBGJLMLK_64 | 9527 | 11152 | False | Unknown | VOG0267, VOG0267, VOG0267, VOG3349, VOG8288, VOG0267 |
| MBGJLMLK_108 | 8494 | 29533 | False | Siphoviridae | VOG4705, VOG4334, VOG4856, VOG6163, VOG4633, VOG4545, VOG0800, VOG0725, VOG0799, VOG0724, VOG5660, VOG0723, VOG4713, VOG1319, VOG10914, VOG4564, VOG0720, VOG1517, VOG4618, VOG4618 |
| MBGJLMLK_108 | 36273 | 41005 | False | Siphoviridae | VOG0514, VOG0283, VOG0535, VOG2338, VOG7236, VOG9741 |
Phigaro v2.4.0 (Database: Jan. 2024 release)