Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 9 | 0 | 0 | 9.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| ENCHIMEI_67 | 201413 | 203338 | tet(Q) | ARO:3000191 | tet(Q) | 96.41 | 97.56 | Z21523.1 |
| ENCHIMEI_7 | 132088 | 133293 | Mef(En2) | ARO:3004659 | Mef(En2) | 99.50 | 100.00 | AF251288.1 |
| ENCHIMEI_7 | 25774 | 26979 | Mef(En2) | ARO:3004659 | Mef(En2) | 99.50 | 100.00 | AF251288.1 |
| ENCHIMEI_46 | 1839 | 2639 | ErmF | ARO:3000498 | ErmF | 97.37 | 100.00 | M17124.1 |
| ENCHIMEI_53 | 94 | 957 | aadS | ARO:3004683 | aadS | 100.00 | 100.00 | M72415.1 |
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| ENCHIMEI_67 | 201413 | 203338 | tet(Q) | Doxycycline, Tetracycline, Minocycline | 99.84 | 100.00 | L33696 |
| ENCHIMEI_46 | 1839 | 2639 | erm(F) | Erythromycin, Lincomycin, Clindamycin, Quinupristin, Pristinamycin IA, Virginiamycin S | 99.75 | 100.00 | M62487 |
| ENCHIMEI_43 | 5474 | 6691 | mef(A) | Erythromycin, Azithromycin | 95.16 | 100.00 | AF227520 |
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| ENCHIMEI_53 | 94 | 954 | aadS | aminoglycoside 6-adenylyltransferase AadS | EXACTX | 100.00 | 100.00 | WP_003013318.1 |
| ENCHIMEI_7 | 133318 | 133827 | lnu(AN2) | lincosamide nucleotidyltransferase Lnu(AN2) | EXACTX | 100.00 | 100.00 | WP_004308783.1 |
| ENCHIMEI_7 | 27004 | 27513 | lnu(AN2) | lincosamide nucleotidyltransferase Lnu(AN2) | EXACTX | 100.00 | 100.00 | WP_004308783.1 |
| ENCHIMEI_67 | 201413 | 203335 | tet(Q) | tetracycline resistance ribosomal protection protein Tet(Q) | BLASTX | 99.53 | 100.00 | WP_063856407.1 |
| ENCHIMEI_7 | 132088 | 133290 | mef(En2) | macrolide efflux MFS transporter Mef(En2) | BLASTX | 99.50 | 100.00 | WP_063853729.1 |
| ENCHIMEI_7 | 25774 | 26976 | mef(En2) | macrolide efflux MFS transporter Mef(En2) | BLASTX | 99.50 | 100.00 | WP_063853729.1 |
| ENCHIMEI_46 | 1839 | 2636 | erm(F) | 23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(F) | BLASTX | 99.25 | 100.00 | WP_063844771.1 |
| ENCHIMEI_53 | 1211 | 2050 | estT | macrolide hydrolase EstT | BLASTX | 98.94 | 100.00 | WP_185148407.1 |
| ENCHIMEI_43 | 5477 | 6691 | mef(A) | macrolide efflux MFS transporter Mef(A) | BLASTX | 98.77 | 99.26 | WP_012102963.1 |
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| No hit found | ||||||
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| ENCHIMEI_1 | 0.0 | 1.0 | 0.0 |
| ENCHIMEI_2 | 0.0 | 1.0 | 0.0 |
| ENCHIMEI_3 | 0.0 | 1.0 | 0.0 |
| ENCHIMEI_4 | 0.0 | 1.0 | 0.0 |
| ENCHIMEI_5 | 0.0 | 1.0 | 0.0 |
| ENCHIMEI_6 | 0.0 | 1.0 | 0.0 |
| ENCHIMEI_7 | 0.0 | 1.0 | 0.0 |
| ENCHIMEI_8 | 0.0 | 1.0 | 0.0 |
| ENCHIMEI_9 | 0.0 | 1.0 | 0.0 |
| ENCHIMEI_10 | 0.0 | 1.0 | 0.0 |
| ENCHIMEI_11 | 0.0 | 1.0 | 0.0 |
| ENCHIMEI_12 | 0.0 | 1.0 | 0.0 |
| ENCHIMEI_13 | 0.0 | 1.0 | 0.0 |
| ENCHIMEI_14 | 0.0 | 1.0 | 0.0 |
| ENCHIMEI_15 | 1.0 | 0.0 | 1.0 |
| ENCHIMEI_16 | 0.0 | 1.0 | 0.0 |
| ENCHIMEI_17 | 0.0 | 1.0 | 0.0 |
| ENCHIMEI_18 | 0.0 | 1.0 | 0.0 |
| ENCHIMEI_19 | 0.0 | 1.0 | 0.0 |
| ENCHIMEI_20 | 0.0 | 1.0 | 0.0 |
| ENCHIMEI_21 | 0.0 | 1.0 | 0.0 |
| ENCHIMEI_22 | 0.0 | 1.0 | 0.0 |
| ENCHIMEI_23 | 0.0 | 1.0 | 0.0 |
| ENCHIMEI_24 | 0.0 | 1.0 | 0.0 |
| ENCHIMEI_25 | 0.0 | 1.0 | 0.0 |
| ENCHIMEI_26 | 0.0 | 1.0 | 0.0 |
| ENCHIMEI_27 | 0.0 | 1.0 | 0.0 |
| ENCHIMEI_28 | 0.0 | 1.0 | 0.0 |
| ENCHIMEI_29 | 0.0 | 1.0 | 0.0 |
| ENCHIMEI_30 | 0.0 | 1.0 | 0.0 |
| ENCHIMEI_31 | 0.0 | 1.0 | 0.0 |
| ENCHIMEI_32 | 0.0 | 1.0 | 0.0 |
| ENCHIMEI_33 | 0.0 | 1.0 | 0.0 |
| ENCHIMEI_34 | 0.0 | 1.0 | 0.0 |
| ENCHIMEI_35 | 0.0 | 1.0 | 0.0 |
| ENCHIMEI_36 | 0.0 | 1.0 | 0.0 |
| ENCHIMEI_37 | 0.0 | 1.0 | 0.0 |
| ENCHIMEI_38 | 0.0 | 1.0 | 0.0 |
| ENCHIMEI_39 | 0.0 | 1.0 | 0.0 |
| ENCHIMEI_40 | 0.0 | 1.0 | 0.0 |
| ENCHIMEI_41 | 0.0 | 1.0 | 0.0 |
| ENCHIMEI_42 | 0.0 | 1.0 | 0.0 |
| ENCHIMEI_43 | 1.0 | 0.0 | 1.0 |
| ENCHIMEI_45 | 0.0 | 1.0 | 0.0 |
| ENCHIMEI_46 | 1.0 | 0.0 | 1.0 |
| ENCHIMEI_47 | 1.0 | 0.0 | 1.0 |
| ENCHIMEI_48 | 1.0 | 0.0 | 1.0 |
| ENCHIMEI_49 | 1.0 | 0.0 | 1.0 |
| ENCHIMEI_50 | 0.0 | 1.0 | 0.0 |
| ENCHIMEI_51 | 0.0 | 1.0 | 0.0 |
| ENCHIMEI_52 | 0.0 | 1.0 | 0.0 |
| ENCHIMEI_53 | 1.0 | 0.0 | 1.0 |
| ENCHIMEI_54 | 1.0 | 0.0 | 1.0 |
| ENCHIMEI_55 | 1.0 | 0.0 | 1.0 |
| ENCHIMEI_56 | 0.0 | 1.0 | 0.0 |
| ENCHIMEI_57 | 0.0 | 1.0 | 0.0 |
| ENCHIMEI_58 | 0.0 | 1.0 | 0.0 |
| ENCHIMEI_59 | 1.0 | 0.0 | 1.0 |
| ENCHIMEI_60 | 1.0 | 0.0 | 1.0 |
| ENCHIMEI_61 | 0.0 | 1.0 | 0.0 |
| ENCHIMEI_67 | 0.0 | 1.0 | 0.0 |
| ENCHIMEI_69 | 0.0 | 1.0 | 0.0 |
| ENCHIMEI_70 | 0.0 | 1.0 | 0.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| ENCHIMEI_2 | 13490 | 21175 | False | Siphoviridae | VOG4581, |
Phigaro v2.4.0 (Database: Jan. 2024 release)