Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 0 | 0 | 1 | 1.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| No hit found | |||||||
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| NEAMPNKN_84 | 27585 | 26005 | GroEL | 0.0 | folding of newly synthesized proteins, preventing misfolding and aggregation | 86.91 | 96.70 | BAA04222 |
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| No hit found | ||||||
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| NEAMPNKN_1 | 0.0 | 1.0 | 0.0 |
| NEAMPNKN_2 | 1.0 | 0.0 | 1.0 |
| NEAMPNKN_4 | 1.0 | 0.0 | 1.0 |
| NEAMPNKN_5 | 0.0 | 1.0 | 0.0 |
| NEAMPNKN_6 | 1.0 | 0.0 | 1.0 |
| NEAMPNKN_7 | 0.0 | 1.0 | 0.0 |
| NEAMPNKN_8 | 1.0 | 0.0 | 1.0 |
| NEAMPNKN_9 | 0.0 | 1.0 | 0.0 |
| NEAMPNKN_10 | 1.0 | 0.0 | 1.0 |
| NEAMPNKN_11 | 0.0 | 1.0 | 0.0 |
| NEAMPNKN_12 | 0.0 | 1.0 | 0.0 |
| NEAMPNKN_13 | 0.0 | 1.0 | 0.0 |
| NEAMPNKN_14 | 0.0 | 1.0 | 0.0 |
| NEAMPNKN_15 | 1.0 | 0.0 | 1.0 |
| NEAMPNKN_16 | 0.0 | 1.0 | 0.0 |
| NEAMPNKN_17 | 0.0 | 1.0 | 0.0 |
| NEAMPNKN_18 | 0.0 | 1.0 | 0.0 |
| NEAMPNKN_19 | 0.0 | 1.0 | 0.0 |
| NEAMPNKN_20 | 0.0 | 1.0 | 0.0 |
| NEAMPNKN_21 | 1.0 | 0.0 | 1.0 |
| NEAMPNKN_22 | 0.0 | 1.0 | 0.0 |
| NEAMPNKN_24 | 0.0 | 1.0 | 0.0 |
| NEAMPNKN_25 | 0.0 | 1.0 | 0.0 |
| NEAMPNKN_27 | 0.0 | 1.0 | 0.0 |
| NEAMPNKN_28 | 0.0 | 1.0 | 0.0 |
| NEAMPNKN_29 | 0.0 | 1.0 | 0.0 |
| NEAMPNKN_30 | 0.0 | 1.0 | 0.0 |
| NEAMPNKN_31 | 0.0 | 1.0 | 0.0 |
| NEAMPNKN_32 | 0.0 | 1.0 | 0.0 |
| NEAMPNKN_33 | 0.0 | 1.0 | 0.0 |
| NEAMPNKN_34 | 0.0 | 1.0 | 0.0 |
| NEAMPNKN_35 | 0.0 | 1.0 | 0.0 |
| NEAMPNKN_36 | 1.0 | 0.0 | 1.0 |
| NEAMPNKN_37 | 0.0 | 1.0 | 0.0 |
| NEAMPNKN_38 | 0.0 | 1.0 | 0.0 |
| NEAMPNKN_39 | 0.0 | 1.0 | 0.0 |
| NEAMPNKN_40 | 1.0 | 0.0 | 1.0 |
| NEAMPNKN_41 | 0.0 | 1.0 | 0.0 |
| NEAMPNKN_42 | 0.0 | 1.0 | 0.0 |
| NEAMPNKN_43 | 0.0 | 1.0 | 0.0 |
| NEAMPNKN_44 | 1.0 | 0.0 | 1.0 |
| NEAMPNKN_45 | 0.0 | 1.0 | 0.0 |
| NEAMPNKN_46 | 0.0 | 1.0 | 0.0 |
| NEAMPNKN_47 | 0.0 | 1.0 | 0.0 |
| NEAMPNKN_48 | 0.0 | 1.0 | 0.0 |
| NEAMPNKN_49 | 0.0 | 1.0 | 0.0 |
| NEAMPNKN_50 | 0.0 | 1.0 | 0.0 |
| NEAMPNKN_51 | 0.0 | 1.0 | 0.0 |
| NEAMPNKN_52 | 0.0 | 1.0 | 0.0 |
| NEAMPNKN_53 | 0.0 | 1.0 | 0.0 |
| NEAMPNKN_54 | 0.0 | 1.0 | 0.0 |
| NEAMPNKN_55 | 0.0 | 1.0 | 0.0 |
| NEAMPNKN_56 | 0.0 | 1.0 | 0.0 |
| NEAMPNKN_57 | 0.0 | 1.0 | 0.0 |
| NEAMPNKN_58 | 0.0 | 1.0 | 0.0 |
| NEAMPNKN_59 | 1.0 | 0.0 | 1.0 |
| NEAMPNKN_60 | 0.0 | 1.0 | 0.0 |
| NEAMPNKN_61 | 1.0 | 0.0 | 1.0 |
| NEAMPNKN_62 | 0.0 | 1.0 | 0.0 |
| NEAMPNKN_63 | 0.0 | 1.0 | 0.0 |
| NEAMPNKN_64 | 0.0 | 1.0 | 0.0 |
| NEAMPNKN_65 | 0.0 | 1.0 | 0.0 |
| NEAMPNKN_66 | 0.0 | 1.0 | 0.0 |
| NEAMPNKN_67 | 0.0 | 1.0 | 0.0 |
| NEAMPNKN_68 | 0.0 | 1.0 | 0.0 |
| NEAMPNKN_69 | 0.0 | 1.0 | 0.0 |
| NEAMPNKN_70 | 0.0 | 1.0 | 0.0 |
| NEAMPNKN_71 | 0.0 | 1.0 | 0.0 |
| NEAMPNKN_72 | 0.0 | 1.0 | 0.0 |
| NEAMPNKN_73 | 1.0 | 0.0 | 1.0 |
| NEAMPNKN_74 | 0.0 | 1.0 | 0.0 |
| NEAMPNKN_75 | 0.0 | 1.0 | 0.0 |
| NEAMPNKN_76 | 1.0 | 0.0 | 1.0 |
| NEAMPNKN_77 | 0.0 | 1.0 | 0.0 |
| NEAMPNKN_78 | 0.0 | 1.0 | 0.0 |
| NEAMPNKN_79 | 0.0 | 1.0 | 0.0 |
| NEAMPNKN_80 | 0.0 | 1.0 | 0.0 |
| NEAMPNKN_81 | 0.0 | 1.0 | 0.0 |
| NEAMPNKN_82 | 0.0 | 1.0 | 0.0 |
| NEAMPNKN_83 | 0.0 | 1.0 | 0.0 |
| NEAMPNKN_84 | 0.0 | 1.0 | 0.0 |
| NEAMPNKN_85 | 1.0 | 0.0 | 1.0 |
| NEAMPNKN_87 | 1.0 | 0.0 | 1.0 |
| NEAMPNKN_88 | 0.0 | 1.0 | 0.0 |
| NEAMPNKN_89 | 0.0 | 1.0 | 0.0 |
| NEAMPNKN_90 | 1.0 | 0.0 | 1.0 |
| NEAMPNKN_91 | 0.0 | 1.0 | 0.0 |
| NEAMPNKN_93 | 0.0 | 1.0 | 0.0 |
| NEAMPNKN_94 | 0.0 | 1.0 | 0.0 |
| NEAMPNKN_95 | 0.0 | 1.0 | 0.0 |
| NEAMPNKN_96 | 0.0 | 1.0 | 0.0 |
| NEAMPNKN_97 | 0.0 | 1.0 | 0.0 |
| NEAMPNKN_98 | 0.0 | 1.0 | 0.0 |
| NEAMPNKN_99 | 1.0 | 0.0 | 1.0 |
| NEAMPNKN_100 | 0.0 | 1.0 | 0.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| NEAMPNKN_100 | 118200 | 122420 | False | Myoviridae | VOG0572, |
| NEAMPNKN_100 | 187989 | 208746 | False | Siphoviridae | VOG7438, |
Phigaro v2.4.0 (Database: Jan. 2024 release)