Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 0 | 1 | 0 | 1.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| No hit found | |||||||
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| AGGCKNPE_8 | 1 | 1377 | aec15 | 0.0 | ACE T6SS | Effector delivery system | 95.79 | 69.34 | WP_000053624 |
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| AGGCKNPE_15 | 5 | 1114 | virulence_ecoli | gad | Glutamate decarboxylase | 100.0 | 79.23 | CP002167 |
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| No hit found | ||||||
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| AGGCKNPE_1 | 0.0 | 1.0 | 0.0 |
| AGGCKNPE_2 | 0.0 | 1.0 | 0.0 |
| AGGCKNPE_3 | 1.0 | 0.0 | 1.0 |
| AGGCKNPE_4 | 0.0 | 1.0 | 0.0 |
| AGGCKNPE_5 | 0.0 | 1.0 | 0.0 |
| AGGCKNPE_6 | 0.0 | 1.0 | 0.0 |
| AGGCKNPE_7 | 0.0 | 1.0 | 0.0 |
| AGGCKNPE_8 | 1.0 | 0.0 | 1.0 |
| AGGCKNPE_9 | 0.0 | 1.0 | 0.0 |
| AGGCKNPE_10 | 0.0 | 1.0 | 0.0 |
| AGGCKNPE_11 | 0.0 | 1.0 | 0.0 |
| AGGCKNPE_12 | 1.0 | 0.0 | 1.0 |
| AGGCKNPE_13 | 0.0 | 1.0 | 0.0 |
| AGGCKNPE_14 | 1.0 | 0.0 | 1.0 |
| AGGCKNPE_15 | 0.0 | 1.0 | 0.0 |
| AGGCKNPE_16 | 1.0 | 0.0 | 1.0 |
| AGGCKNPE_17 | 0.0 | 1.0 | 0.0 |
| AGGCKNPE_18 | 0.0 | 1.0 | 0.0 |
| AGGCKNPE_19 | 1.0 | 0.0 | 1.0 |
| AGGCKNPE_20 | 0.0 | 1.0 | 0.0 |
| AGGCKNPE_21 | 0.0 | 1.0 | 0.0 |
| AGGCKNPE_22 | 0.0 | 1.0 | 0.0 |
| AGGCKNPE_23 | 0.0 | 1.0 | 0.0 |
| AGGCKNPE_24 | 0.0 | 1.0 | 0.0 |
| AGGCKNPE_25 | 0.0 | 1.0 | 0.0 |
| AGGCKNPE_26 | 0.0 | 1.0 | 0.0 |
| AGGCKNPE_27 | 0.0 | 1.0 | 0.0 |
| AGGCKNPE_28 | 0.0 | 1.0 | 0.0 |
| AGGCKNPE_29 | 0.0 | 1.0 | 0.0 |
| AGGCKNPE_30 | 0.0 | 1.0 | 0.0 |
| AGGCKNPE_31 | 0.0 | 1.0 | 0.0 |
| AGGCKNPE_32 | 0.0 | 1.0 | 0.0 |
| AGGCKNPE_33 | 1.0 | 0.0 | 1.0 |
| AGGCKNPE_34 | 1.0 | 0.0 | 1.0 |
| AGGCKNPE_35 | 0.0 | 1.0 | 0.0 |
| AGGCKNPE_36 | 0.0 | 1.0 | 0.0 |
| AGGCKNPE_37 | 0.0 | 1.0 | 0.0 |
| AGGCKNPE_38 | 1.0 | 0.0 | 1.0 |
| AGGCKNPE_39 | 0.0 | 1.0 | 0.0 |
| AGGCKNPE_40 | 0.0 | 1.0 | 0.0 |
| AGGCKNPE_41 | 0.0 | 1.0 | 0.0 |
| AGGCKNPE_42 | 0.0 | 1.0 | 0.0 |
| AGGCKNPE_43 | 0.0 | 1.0 | 0.0 |
| AGGCKNPE_44 | 0.0 | 1.0 | 0.0 |
| AGGCKNPE_45 | 1.0 | 0.0 | 1.0 |
| AGGCKNPE_46 | 0.0 | 1.0 | 0.0 |
| AGGCKNPE_47 | 0.0 | 1.0 | 0.0 |
| AGGCKNPE_48 | 0.0 | 1.0 | 0.0 |
| AGGCKNPE_49 | 0.0 | 1.0 | 0.0 |
| AGGCKNPE_50 | 0.0 | 1.0 | 0.0 |
| AGGCKNPE_51 | 0.0 | 1.0 | 0.0 |
| AGGCKNPE_52 | 0.0 | 1.0 | 0.0 |
| AGGCKNPE_53 | 0.0 | 1.0 | 0.0 |
| AGGCKNPE_54 | 1.0 | 0.0 | 1.0 |
| AGGCKNPE_55 | 1.0 | 0.0 | 1.0 |
| AGGCKNPE_56 | 0.0 | 1.0 | 0.0 |
| AGGCKNPE_57 | 1.0 | 0.0 | 1.0 |
| AGGCKNPE_58 | 1.0 | 0.0 | 1.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| AGGCKNPE_17 | 164516 | 167283 | False | Siphoviridae | VOG4972, |
| AGGCKNPE_31 | 207283 | 224229 | False | Siphoviridae | VOG0275, |
| AGGCKNPE_39 | 81648 | 92116 | False | Siphoviridae | VOG6495, |
Phigaro v2.4.0 (Database: Jan. 2024 release)