Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 2 | 0 | 0 | 2.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| BGIAFAOE_15 | 20632 | 21534 | CepA-44 | ARO:3006225 | CepA-44 | 99.33 | 100.00 | NG_050386.1 |
| BGIAFAOE_66 | 19632 | 21551 | tet(O) | ARO:3000190 | tet(O) | 99.06 | 100.00 | M18896.2 |
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| BGIAFAOE_66 | 19632 | 21551 | tet(O) | Doxycycline, Tetracycline, Minocycline | 99.69 | 100.00 | M20925 |
| BGIAFAOE_15 | 20632 | 21534 | cepA | Unknown Beta-lactam | 99.56 | 100.00 | U05887 |
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| BGIAFAOE_66 | 19632 | 21548 | tet(O) | tetracycline resistance ribosomal protection protein Tet(O) | BLASTX | 99.69 | 100.00 | WP_063856405.1 |
| BGIAFAOE_15 | 20632 | 21531 | cepA | CepA family extended-spectrum class A beta-lactamase | BLASTX | 99.67 | 100.00 | WP_005816369.1 |
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| No hit found | ||||||
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| BGIAFAOE_1 | 0.0 | 1.0 | 0.0 |
| BGIAFAOE_2 | 0.0 | 1.0 | 0.0 |
| BGIAFAOE_3 | 0.0 | 1.0 | 0.0 |
| BGIAFAOE_4 | 0.0 | 1.0 | 0.0 |
| BGIAFAOE_5 | 0.0 | 1.0 | 0.0 |
| BGIAFAOE_6 | 0.0 | 1.0 | 0.0 |
| BGIAFAOE_7 | 0.0 | 1.0 | 0.0 |
| BGIAFAOE_8 | 0.0 | 1.0 | 0.0 |
| BGIAFAOE_9 | 1.0 | 0.0 | 1.0 |
| BGIAFAOE_10 | 0.0 | 1.0 | 0.0 |
| BGIAFAOE_11 | 1.0 | 0.0 | 1.0 |
| BGIAFAOE_12 | 0.0 | 1.0 | 0.0 |
| BGIAFAOE_13 | 0.0 | 1.0 | 0.0 |
| BGIAFAOE_14 | 0.0 | 1.0 | 0.0 |
| BGIAFAOE_15 | 0.0 | 1.0 | 0.0 |
| BGIAFAOE_16 | 0.0 | 1.0 | 0.0 |
| BGIAFAOE_17 | 0.0 | 1.0 | 0.0 |
| BGIAFAOE_18 | 0.0 | 1.0 | 0.0 |
| BGIAFAOE_19 | 0.0 | 1.0 | 0.0 |
| BGIAFAOE_20 | 0.0 | 1.0 | 0.0 |
| BGIAFAOE_21 | 1.0 | 0.0 | 1.0 |
| BGIAFAOE_22 | 0.0 | 1.0 | 0.0 |
| BGIAFAOE_23 | 0.0 | 1.0 | 0.0 |
| BGIAFAOE_24 | 0.0 | 1.0 | 0.0 |
| BGIAFAOE_25 | 0.0 | 1.0 | 0.0 |
| BGIAFAOE_26 | 0.0 | 1.0 | 0.0 |
| BGIAFAOE_27 | 0.0 | 1.0 | 0.0 |
| BGIAFAOE_28 | 0.0 | 1.0 | 0.0 |
| BGIAFAOE_29 | 0.0 | 1.0 | 0.0 |
| BGIAFAOE_30 | 1.0 | 0.0 | 1.0 |
| BGIAFAOE_31 | 0.0 | 1.0 | 0.0 |
| BGIAFAOE_32 | 0.0 | 1.0 | 0.0 |
| BGIAFAOE_33 | 0.0 | 1.0 | 0.0 |
| BGIAFAOE_34 | 0.0 | 1.0 | 0.0 |
| BGIAFAOE_35 | 0.0 | 1.0 | 0.0 |
| BGIAFAOE_36 | 0.0 | 1.0 | 0.0 |
| BGIAFAOE_37 | 0.0 | 1.0 | 0.0 |
| BGIAFAOE_38 | 1.0 | 0.0 | 1.0 |
| BGIAFAOE_39 | 0.0 | 1.0 | 0.0 |
| BGIAFAOE_40 | 0.0 | 1.0 | 0.0 |
| BGIAFAOE_41 | 1.0 | 0.0 | 1.0 |
| BGIAFAOE_42 | 0.0 | 1.0 | 0.0 |
| BGIAFAOE_43 | 0.0 | 1.0 | 0.0 |
| BGIAFAOE_44 | 0.0 | 1.0 | 0.0 |
| BGIAFAOE_45 | 0.0 | 1.0 | 0.0 |
| BGIAFAOE_46 | 0.0 | 1.0 | 0.0 |
| BGIAFAOE_47 | 0.0 | 1.0 | 0.0 |
| BGIAFAOE_48 | 0.0 | 1.0 | 0.0 |
| BGIAFAOE_49 | 0.0 | 1.0 | 0.0 |
| BGIAFAOE_50 | 0.0 | 1.0 | 0.0 |
| BGIAFAOE_51 | 0.0 | 1.0 | 0.0 |
| BGIAFAOE_52 | 0.0 | 1.0 | 0.0 |
| BGIAFAOE_53 | 1.0 | 0.0 | 1.0 |
| BGIAFAOE_54 | 0.0 | 1.0 | 0.0 |
| BGIAFAOE_55 | 0.0 | 1.0 | 0.0 |
| BGIAFAOE_56 | 1.0 | 0.0 | 1.0 |
| BGIAFAOE_57 | 1.0 | 0.0 | 1.0 |
| BGIAFAOE_58 | 0.0 | 1.0 | 0.0 |
| BGIAFAOE_59 | 0.0 | 1.0 | 0.0 |
| BGIAFAOE_60 | 0.0 | 1.0 | 0.0 |
| BGIAFAOE_61 | 0.0 | 1.0 | 0.0 |
| BGIAFAOE_62 | 0.0 | 1.0 | 0.0 |
| BGIAFAOE_63 | 0.0 | 1.0 | 0.0 |
| BGIAFAOE_64 | 0.0 | 1.0 | 0.0 |
| BGIAFAOE_65 | 0.0 | 1.0 | 0.0 |
| BGIAFAOE_66 | 0.0 | 1.0 | 0.0 |
| BGIAFAOE_67 | 0.0 | 1.0 | 0.0 |
| BGIAFAOE_68 | 0.0 | 1.0 | 0.0 |
| BGIAFAOE_69 | 0.0 | 1.0 | 0.0 |
| BGIAFAOE_70 | 0.0 | 1.0 | 0.0 |
| BGIAFAOE_71 | 1.0 | 0.0 | 1.0 |
| BGIAFAOE_72 | 0.0 | 1.0 | 0.0 |
| BGIAFAOE_73 | 0.0 | 1.0 | 0.0 |
| BGIAFAOE_74 | 0.0 | 1.0 | 0.0 |
| BGIAFAOE_75 | 0.0 | 1.0 | 0.0 |
| BGIAFAOE_76 | 0.0 | 1.0 | 0.0 |
| BGIAFAOE_77 | 0.0 | 1.0 | 0.0 |
| BGIAFAOE_78 | 0.0 | 1.0 | 0.0 |
| BGIAFAOE_79 | 0.0 | 1.0 | 0.0 |
| BGIAFAOE_80 | 0.0 | 1.0 | 0.0 |
| BGIAFAOE_81 | 0.0 | 1.0 | 0.0 |
| BGIAFAOE_82 | 0.0 | 1.0 | 0.0 |
| BGIAFAOE_83 | 0.0 | 1.0 | 0.0 |
| BGIAFAOE_84 | 0.0 | 1.0 | 0.0 |
| BGIAFAOE_85 | 0.0 | 1.0 | 0.0 |
| BGIAFAOE_86 | 0.0 | 1.0 | 0.0 |
| BGIAFAOE_87 | 0.0 | 1.0 | 0.0 |
| BGIAFAOE_88 | 1.0 | 0.0 | 1.0 |
| BGIAFAOE_89 | 0.0 | 1.0 | 0.0 |
| BGIAFAOE_90 | 0.0 | 1.0 | 0.0 |
| BGIAFAOE_91 | 0.0 | 1.0 | 0.0 |
| BGIAFAOE_92 | 0.0 | 1.0 | 0.0 |
| BGIAFAOE_93 | 0.0 | 1.0 | 0.0 |
| BGIAFAOE_94 | 0.0 | 1.0 | 0.0 |
| BGIAFAOE_95 | 0.0 | 1.0 | 0.0 |
| BGIAFAOE_96 | 0.0 | 1.0 | 0.0 |
| BGIAFAOE_97 | 0.0 | 1.0 | 0.0 |
| BGIAFAOE_98 | 1.0 | 0.0 | 1.0 |
| BGIAFAOE_99 | 0.0 | 1.0 | 0.0 |
| BGIAFAOE_100 | 0.0 | 1.0 | 0.0 |
| BGIAFAOE_101 | 0.0 | 1.0 | 0.0 |
| BGIAFAOE_102 | 0.0 | 1.0 | 0.0 |
| BGIAFAOE_103 | 1.0 | 0.0 | 1.0 |
| BGIAFAOE_104 | 0.0 | 1.0 | 0.0 |
| BGIAFAOE_105 | 0.0 | 1.0 | 0.0 |
| BGIAFAOE_106 | 0.0 | 1.0 | 0.0 |
| BGIAFAOE_107 | 0.0 | 1.0 | 0.0 |
| BGIAFAOE_108 | 0.0 | 1.0 | 0.0 |
| BGIAFAOE_109 | 0.0 | 1.0 | 0.0 |
| BGIAFAOE_110 | 0.0 | 1.0 | 0.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| BGIAFAOE_47 | 10253 | 18642 | False | Siphoviridae | VOG7238, |
Phigaro v2.4.0 (Database: Jan. 2024 release)