Probiotic potential risk score


ARGs VFs PGs PPRS
3003.00

PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).

Antibiotic resistance genes


Comprehensive Antibiotic Resistance Database (CARD)

Query ID Begin End ARO name ARO accession CARD name Identity Coverage Accession no.
FEFEOLIK_972967330878Mef(En2)ARO:3004659Mef(En2)99.50100.00AF251288.1
FEFEOLIK_9838015726tet(Q)ARO:3000191tet(Q)96.4197.56Z21523.1

RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)

ResFinder

Query ID Begin End Resistance gene Phenotype Identity Coverage Accession no.
FEFEOLIK_9838015726tet(Q)Doxycycline, Tetracycline, Minocycline99.79100.00L33696

ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)

AMRFinderPlus

Query ID Begin End Gene symbol Sequence name Method Identity Coverage Accession no.
FEFEOLIK_973090331412lnu(AN2)lincosamide nucleotidyltransferase Lnu(AN2)EXACTX100.00100.00WP_004308783.1
FEFEOLIK_9838045726tet(Q)tetracycline resistance ribosomal protection protein Tet(Q)BLASTX99.53100.00WP_063856407.1
FEFEOLIK_972967330875mef(En2)macrolide efflux MFS transporter Mef(En2)BLASTX99.50100.00WP_063853729.1

AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)

Virulence factors


Virulence Factor Database (VFDB)

Query ID qstart qend Gene name e-value VF name VF category Identity Coverage Accession no.
No hit found

BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)

VirulenceFinder

Query ID Begin End Database Virulence factor Protein function Identity Coverage Accession no.
No hit found

VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)

Pathogenic genes


PHI-base

Query ID qstart qend Gene name e-value Function Identity Coverage Gene ID
No hit found

BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)

Plasmid


PlasmidFinder

Query ID Begin End Plasmid Query / Template Identity Accession no.
FEFEOLIK_22413993repUS2584 / 68180.48BFU30316

PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)

PlasmidHunter

Query ID Prediction Chromosome Plasmid
FEFEOLIK_10.01.00.0
FEFEOLIK_20.01.00.0
FEFEOLIK_30.01.00.0
FEFEOLIK_40.01.00.0
FEFEOLIK_61.00.01.0
FEFEOLIK_71.00.01.0
FEFEOLIK_80.01.00.0
FEFEOLIK_91.00.01.0
FEFEOLIK_100.01.00.0
FEFEOLIK_110.01.00.0
FEFEOLIK_121.00.01.0
FEFEOLIK_130.01.00.0
FEFEOLIK_141.00.01.0
FEFEOLIK_151.00.01.0
FEFEOLIK_161.00.01.0
FEFEOLIK_171.00.01.0
FEFEOLIK_181.00.01.0
FEFEOLIK_190.01.00.0
FEFEOLIK_201.00.01.0
FEFEOLIK_211.00.01.0
FEFEOLIK_240.01.00.0
FEFEOLIK_350.01.00.0
FEFEOLIK_460.01.00.0
FEFEOLIK_570.01.00.0
FEFEOLIK_680.01.00.0
FEFEOLIK_740.01.00.0
FEFEOLIK_750.01.00.0
FEFEOLIK_760.01.00.0
FEFEOLIK_770.01.00.0
FEFEOLIK_780.01.00.0
FEFEOLIK_790.01.00.0
FEFEOLIK_800.01.00.0
FEFEOLIK_810.01.00.0
FEFEOLIK_820.01.00.0
FEFEOLIK_830.01.00.0
FEFEOLIK_840.01.00.0
FEFEOLIK_850.01.00.0
FEFEOLIK_860.01.00.0
FEFEOLIK_870.01.00.0
FEFEOLIK_880.01.00.0
FEFEOLIK_890.01.00.0
FEFEOLIK_900.01.00.0
FEFEOLIK_910.01.00.0
FEFEOLIK_920.01.00.0
FEFEOLIK_930.01.00.0
FEFEOLIK_940.01.00.0
FEFEOLIK_950.01.00.0
FEFEOLIK_960.01.00.0
FEFEOLIK_970.01.00.0
FEFEOLIK_980.01.00.0
FEFEOLIK_990.01.00.0
FEFEOLIK_1000.01.00.0
FEFEOLIK_1010.01.00.0
FEFEOLIK_1020.01.00.0
FEFEOLIK_1030.01.00.0
FEFEOLIK_1040.01.00.0
FEFEOLIK_1050.01.00.0
FEFEOLIK_1060.01.00.0
FEFEOLIK_1070.01.00.0
FEFEOLIK_1080.01.00.0
FEFEOLIK_1091.00.01.0
FEFEOLIK_1100.01.00.0
FEFEOLIK_1110.01.00.0
FEFEOLIK_1120.01.00.0
FEFEOLIK_1130.01.00.0
FEFEOLIK_1141.00.01.0
FEFEOLIK_1150.01.00.0
FEFEOLIK_1160.01.00.0
FEFEOLIK_1170.01.00.0
FEFEOLIK_1180.01.00.0
FEFEOLIK_1190.01.00.0
FEFEOLIK_1200.01.00.0
FEFEOLIK_1210.01.00.0
FEFEOLIK_1221.00.01.0
FEFEOLIK_1230.01.00.0
FEFEOLIK_1240.01.00.0
FEFEOLIK_1250.01.00.0
FEFEOLIK_1260.01.00.0
FEFEOLIK_1270.01.00.0
FEFEOLIK_1280.01.00.0
FEFEOLIK_1290.01.00.0
FEFEOLIK_1300.01.00.0
FEFEOLIK_1310.01.00.0
FEFEOLIK_1320.01.00.0
FEFEOLIK_1330.01.00.0
FEFEOLIK_1340.01.00.0
FEFEOLIK_1350.01.00.0
FEFEOLIK_1360.01.00.0
FEFEOLIK_1371.00.01.0
FEFEOLIK_1380.01.00.0
FEFEOLIK_1390.01.00.0
FEFEOLIK_1400.01.00.0
FEFEOLIK_1410.01.00.0
FEFEOLIK_1420.01.00.0
FEFEOLIK_1430.01.00.0
FEFEOLIK_1440.01.00.0
FEFEOLIK_1450.01.00.0
FEFEOLIK_1460.01.00.0
FEFEOLIK_1470.01.00.0
FEFEOLIK_1480.01.00.0
FEFEOLIK_1490.01.00.0
FEFEOLIK_1500.01.00.0
FEFEOLIK_1511.00.01.0
FEFEOLIK_1520.01.00.0
FEFEOLIK_1531.00.01.0
FEFEOLIK_1540.01.00.0
FEFEOLIK_1551.00.01.0
FEFEOLIK_1561.00.01.0
FEFEOLIK_1571.00.01.0
FEFEOLIK_1581.00.01.0
FEFEOLIK_1591.00.01.0
FEFEOLIK_1600.01.00.0
FEFEOLIK_1621.00.01.0
FEFEOLIK_1631.00.01.0
FEFEOLIK_1641.00.01.0

PlasmidHunter v 1.4.5 (Database: May. 2024 release)

Prophage


Phigaro

Query ID Begin End Transposable Taxonomy pVOGs
No hit found

Phigaro v2.4.0 (Database: Jan. 2024 release)


Insertion sequence (IS) elements