Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 3 | 0 | 0 | 3.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| BDCAAGFA_150 | 29673 | 30878 | Mef(En2) | ARO:3004659 | Mef(En2) | 99.50 | 100.00 | AF251288.1 |
| BDCAAGFA_158 | 21070 | 22995 | tet(Q) | ARO:3000191 | tet(Q) | 96.41 | 97.56 | Z21523.1 |
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| BDCAAGFA_158 | 21070 | 22995 | tet(Q) | Doxycycline, Tetracycline, Minocycline | 99.79 | 100.00 | L33696 |
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| BDCAAGFA_150 | 30903 | 31412 | lnu(AN2) | lincosamide nucleotidyltransferase Lnu(AN2) | EXACTX | 100.00 | 100.00 | WP_004308783.1 |
| BDCAAGFA_158 | 21070 | 22992 | tet(Q) | tetracycline resistance ribosomal protection protein Tet(Q) | BLASTX | 99.53 | 100.00 | WP_063856407.1 |
| BDCAAGFA_150 | 29673 | 30875 | mef(En2) | macrolide efflux MFS transporter Mef(En2) | BLASTX | 99.50 | 100.00 | WP_063853729.1 |
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| BDCAAGFA_27 | 7 | 587 | repUS2 | 584 / 681 | 80.48 | BFU30316 |
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| BDCAAGFA_1 | 0.0 | 1.0 | 0.0 |
| BDCAAGFA_2 | 0.0 | 1.0 | 0.0 |
| BDCAAGFA_3 | 0.0 | 1.0 | 0.0 |
| BDCAAGFA_4 | 0.0 | 1.0 | 0.0 |
| BDCAAGFA_5 | 1.0 | 0.0 | 1.0 |
| BDCAAGFA_6 | 1.0 | 0.0 | 1.0 |
| BDCAAGFA_7 | 0.0 | 1.0 | 0.0 |
| BDCAAGFA_8 | 1.0 | 0.0 | 1.0 |
| BDCAAGFA_9 | 0.0 | 1.0 | 0.0 |
| BDCAAGFA_10 | 0.0 | 1.0 | 0.0 |
| BDCAAGFA_11 | 1.0 | 0.0 | 1.0 |
| BDCAAGFA_12 | 1.0 | 0.0 | 1.0 |
| BDCAAGFA_13 | 0.0 | 1.0 | 0.0 |
| BDCAAGFA_14 | 1.0 | 0.0 | 1.0 |
| BDCAAGFA_16 | 1.0 | 0.0 | 1.0 |
| BDCAAGFA_17 | 1.0 | 0.0 | 1.0 |
| BDCAAGFA_18 | 1.0 | 0.0 | 1.0 |
| BDCAAGFA_19 | 0.0 | 1.0 | 0.0 |
| BDCAAGFA_20 | 1.0 | 0.0 | 1.0 |
| BDCAAGFA_21 | 0.0 | 1.0 | 0.0 |
| BDCAAGFA_22 | 0.0 | 1.0 | 0.0 |
| BDCAAGFA_23 | 1.0 | 0.0 | 1.0 |
| BDCAAGFA_24 | 0.0 | 1.0 | 0.0 |
| BDCAAGFA_25 | 1.0 | 0.0 | 1.0 |
| BDCAAGFA_26 | 0.0 | 1.0 | 0.0 |
| BDCAAGFA_35 | 0.0 | 1.0 | 0.0 |
| BDCAAGFA_46 | 0.0 | 1.0 | 0.0 |
| BDCAAGFA_57 | 0.0 | 1.0 | 0.0 |
| BDCAAGFA_68 | 0.0 | 1.0 | 0.0 |
| BDCAAGFA_79 | 0.0 | 1.0 | 0.0 |
| BDCAAGFA_90 | 0.0 | 1.0 | 0.0 |
| BDCAAGFA_99 | 0.0 | 1.0 | 0.0 |
| BDCAAGFA_100 | 0.0 | 1.0 | 0.0 |
| BDCAAGFA_101 | 0.0 | 1.0 | 0.0 |
| BDCAAGFA_102 | 0.0 | 1.0 | 0.0 |
| BDCAAGFA_103 | 0.0 | 1.0 | 0.0 |
| BDCAAGFA_104 | 0.0 | 1.0 | 0.0 |
| BDCAAGFA_105 | 0.0 | 1.0 | 0.0 |
| BDCAAGFA_106 | 0.0 | 1.0 | 0.0 |
| BDCAAGFA_107 | 0.0 | 1.0 | 0.0 |
| BDCAAGFA_108 | 0.0 | 1.0 | 0.0 |
| BDCAAGFA_109 | 0.0 | 1.0 | 0.0 |
| BDCAAGFA_110 | 0.0 | 1.0 | 0.0 |
| BDCAAGFA_111 | 0.0 | 1.0 | 0.0 |
| BDCAAGFA_112 | 0.0 | 1.0 | 0.0 |
| BDCAAGFA_113 | 0.0 | 1.0 | 0.0 |
| BDCAAGFA_114 | 0.0 | 1.0 | 0.0 |
| BDCAAGFA_115 | 0.0 | 1.0 | 0.0 |
| BDCAAGFA_116 | 0.0 | 1.0 | 0.0 |
| BDCAAGFA_117 | 0.0 | 1.0 | 0.0 |
| BDCAAGFA_118 | 0.0 | 1.0 | 0.0 |
| BDCAAGFA_119 | 0.0 | 1.0 | 0.0 |
| BDCAAGFA_120 | 0.0 | 1.0 | 0.0 |
| BDCAAGFA_121 | 0.0 | 1.0 | 0.0 |
| BDCAAGFA_122 | 0.0 | 1.0 | 0.0 |
| BDCAAGFA_123 | 0.0 | 1.0 | 0.0 |
| BDCAAGFA_124 | 0.0 | 1.0 | 0.0 |
| BDCAAGFA_125 | 0.0 | 1.0 | 0.0 |
| BDCAAGFA_126 | 0.0 | 1.0 | 0.0 |
| BDCAAGFA_127 | 0.0 | 1.0 | 0.0 |
| BDCAAGFA_128 | 0.0 | 1.0 | 0.0 |
| BDCAAGFA_129 | 0.0 | 1.0 | 0.0 |
| BDCAAGFA_130 | 0.0 | 1.0 | 0.0 |
| BDCAAGFA_131 | 0.0 | 1.0 | 0.0 |
| BDCAAGFA_132 | 1.0 | 0.0 | 1.0 |
| BDCAAGFA_133 | 0.0 | 1.0 | 0.0 |
| BDCAAGFA_134 | 0.0 | 1.0 | 0.0 |
| BDCAAGFA_135 | 0.0 | 1.0 | 0.0 |
| BDCAAGFA_136 | 0.0 | 1.0 | 0.0 |
| BDCAAGFA_137 | 0.0 | 1.0 | 0.0 |
| BDCAAGFA_138 | 0.0 | 1.0 | 0.0 |
| BDCAAGFA_139 | 0.0 | 1.0 | 0.0 |
| BDCAAGFA_140 | 0.0 | 1.0 | 0.0 |
| BDCAAGFA_141 | 1.0 | 0.0 | 1.0 |
| BDCAAGFA_142 | 0.0 | 1.0 | 0.0 |
| BDCAAGFA_143 | 1.0 | 0.0 | 1.0 |
| BDCAAGFA_144 | 0.0 | 1.0 | 0.0 |
| BDCAAGFA_145 | 0.0 | 1.0 | 0.0 |
| BDCAAGFA_146 | 1.0 | 0.0 | 1.0 |
| BDCAAGFA_147 | 0.0 | 1.0 | 0.0 |
| BDCAAGFA_148 | 0.0 | 1.0 | 0.0 |
| BDCAAGFA_149 | 0.0 | 1.0 | 0.0 |
| BDCAAGFA_150 | 0.0 | 1.0 | 0.0 |
| BDCAAGFA_151 | 0.0 | 1.0 | 0.0 |
| BDCAAGFA_152 | 0.0 | 1.0 | 0.0 |
| BDCAAGFA_153 | 0.0 | 1.0 | 0.0 |
| BDCAAGFA_154 | 0.0 | 1.0 | 0.0 |
| BDCAAGFA_155 | 0.0 | 1.0 | 0.0 |
| BDCAAGFA_156 | 0.0 | 1.0 | 0.0 |
| BDCAAGFA_157 | 0.0 | 1.0 | 0.0 |
| BDCAAGFA_158 | 0.0 | 1.0 | 0.0 |
| BDCAAGFA_159 | 0.0 | 1.0 | 0.0 |
| BDCAAGFA_160 | 0.0 | 1.0 | 0.0 |
| BDCAAGFA_161 | 0.0 | 1.0 | 0.0 |
| BDCAAGFA_162 | 1.0 | 0.0 | 1.0 |
| BDCAAGFA_163 | 0.0 | 1.0 | 0.0 |
| BDCAAGFA_164 | 0.0 | 1.0 | 0.0 |
| BDCAAGFA_165 | 0.0 | 1.0 | 0.0 |
| BDCAAGFA_166 | 0.0 | 1.0 | 0.0 |
| BDCAAGFA_167 | 0.0 | 1.0 | 0.0 |
| BDCAAGFA_168 | 0.0 | 1.0 | 0.0 |
| BDCAAGFA_169 | 0.0 | 1.0 | 0.0 |
| BDCAAGFA_170 | 0.0 | 1.0 | 0.0 |
| BDCAAGFA_171 | 0.0 | 1.0 | 0.0 |
| BDCAAGFA_172 | 0.0 | 1.0 | 0.0 |
| BDCAAGFA_173 | 0.0 | 1.0 | 0.0 |
| BDCAAGFA_174 | 0.0 | 1.0 | 0.0 |
| BDCAAGFA_175 | 0.0 | 1.0 | 0.0 |
| BDCAAGFA_176 | 1.0 | 0.0 | 1.0 |
| BDCAAGFA_177 | 0.0 | 1.0 | 0.0 |
| BDCAAGFA_178 | 0.0 | 1.0 | 0.0 |
| BDCAAGFA_179 | 1.0 | 0.0 | 1.0 |
| BDCAAGFA_180 | 1.0 | 0.0 | 1.0 |
| BDCAAGFA_181 | 1.0 | 0.0 | 1.0 |
| BDCAAGFA_183 | 0.0 | 1.0 | 0.0 |
| BDCAAGFA_184 | 1.0 | 0.0 | 1.0 |
| BDCAAGFA_185 | 1.0 | 0.0 | 1.0 |
| BDCAAGFA_186 | 1.0 | 0.0 | 1.0 |
| BDCAAGFA_187 | 1.0 | 0.0 | 1.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| No hit found | |||||
Phigaro v2.4.0 (Database: Jan. 2024 release)