Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 2 | 0 | 0 | 2.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| JKBMDFJF_94 | 16694 | 18619 | tet(Q) | ARO:3000191 | tet(Q) | 96.41 | 97.56 | Z21523.1 |
| JKBMDFJF_107 | 10050 | 10940 | CblA-1 | ARO:3002999 | CblA-1 | 96.28 | 100.00 | GQ343019.1 |
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| JKBMDFJF_94 | 16694 | 18619 | tet(Q) | Doxycycline, Tetracycline, Minocycline | 99.84 | 100.00 | L33696 |
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| JKBMDFJF_94 | 16697 | 18619 | tet(Q) | tetracycline resistance ribosomal protection protein Tet(Q) | BLASTX | 99.53 | 100.00 | WP_063856407.1 |
| JKBMDFJF_107 | 10053 | 10940 | cblA | CblA family class A beta-lactamase | BLASTX | 96.28 | 100.00 | WP_005827792.1 |
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| No hit found | ||||||
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| JKBMDFJF_1 | 0.0 | 1.0 | 0.0 |
| JKBMDFJF_2 | 0.0 | 1.0 | 0.0 |
| JKBMDFJF_4 | 1.0 | 0.0 | 1.0 |
| JKBMDFJF_5 | 1.0 | 0.0 | 1.0 |
| JKBMDFJF_6 | 1.0 | 0.0 | 1.0 |
| JKBMDFJF_7 | 1.0 | 0.0 | 1.0 |
| JKBMDFJF_8 | 1.0 | 0.0 | 1.0 |
| JKBMDFJF_9 | 1.0 | 0.0 | 1.0 |
| JKBMDFJF_10 | 1.0 | 0.0 | 1.0 |
| JKBMDFJF_11 | 1.0 | 0.0 | 1.0 |
| JKBMDFJF_13 | 0.0 | 1.0 | 0.0 |
| JKBMDFJF_24 | 0.0 | 1.0 | 0.0 |
| JKBMDFJF_35 | 0.0 | 1.0 | 0.0 |
| JKBMDFJF_46 | 0.0 | 1.0 | 0.0 |
| JKBMDFJF_57 | 0.0 | 1.0 | 0.0 |
| JKBMDFJF_68 | 0.0 | 1.0 | 0.0 |
| JKBMDFJF_79 | 0.0 | 1.0 | 0.0 |
| JKBMDFJF_89 | 0.0 | 1.0 | 0.0 |
| JKBMDFJF_92 | 0.0 | 1.0 | 0.0 |
| JKBMDFJF_93 | 0.0 | 1.0 | 0.0 |
| JKBMDFJF_94 | 0.0 | 1.0 | 0.0 |
| JKBMDFJF_95 | 0.0 | 1.0 | 0.0 |
| JKBMDFJF_96 | 0.0 | 1.0 | 0.0 |
| JKBMDFJF_97 | 0.0 | 1.0 | 0.0 |
| JKBMDFJF_98 | 0.0 | 1.0 | 0.0 |
| JKBMDFJF_99 | 0.0 | 1.0 | 0.0 |
| JKBMDFJF_100 | 0.0 | 1.0 | 0.0 |
| JKBMDFJF_101 | 0.0 | 1.0 | 0.0 |
| JKBMDFJF_102 | 1.0 | 0.0 | 1.0 |
| JKBMDFJF_103 | 0.0 | 1.0 | 0.0 |
| JKBMDFJF_104 | 0.0 | 1.0 | 0.0 |
| JKBMDFJF_105 | 0.0 | 1.0 | 0.0 |
| JKBMDFJF_106 | 0.0 | 1.0 | 0.0 |
| JKBMDFJF_107 | 0.0 | 1.0 | 0.0 |
| JKBMDFJF_108 | 0.0 | 1.0 | 0.0 |
| JKBMDFJF_109 | 1.0 | 0.0 | 1.0 |
| JKBMDFJF_110 | 0.0 | 1.0 | 0.0 |
| JKBMDFJF_111 | 1.0 | 0.0 | 1.0 |
| JKBMDFJF_112 | 0.0 | 1.0 | 0.0 |
| JKBMDFJF_113 | 0.0 | 1.0 | 0.0 |
| JKBMDFJF_114 | 0.0 | 1.0 | 0.0 |
| JKBMDFJF_115 | 0.0 | 1.0 | 0.0 |
| JKBMDFJF_116 | 0.0 | 1.0 | 0.0 |
| JKBMDFJF_117 | 0.0 | 1.0 | 0.0 |
| JKBMDFJF_118 | 1.0 | 0.0 | 1.0 |
| JKBMDFJF_119 | 0.0 | 1.0 | 0.0 |
| JKBMDFJF_120 | 0.0 | 1.0 | 0.0 |
| JKBMDFJF_121 | 0.0 | 1.0 | 0.0 |
| JKBMDFJF_122 | 1.0 | 0.0 | 1.0 |
| JKBMDFJF_123 | 0.0 | 1.0 | 0.0 |
| JKBMDFJF_124 | 0.0 | 1.0 | 0.0 |
| JKBMDFJF_125 | 0.0 | 1.0 | 0.0 |
| JKBMDFJF_126 | 0.0 | 1.0 | 0.0 |
| JKBMDFJF_127 | 0.0 | 1.0 | 0.0 |
| JKBMDFJF_128 | 0.0 | 1.0 | 0.0 |
| JKBMDFJF_129 | 0.0 | 1.0 | 0.0 |
| JKBMDFJF_130 | 0.0 | 1.0 | 0.0 |
| JKBMDFJF_131 | 0.0 | 1.0 | 0.0 |
| JKBMDFJF_132 | 1.0 | 0.0 | 1.0 |
| JKBMDFJF_133 | 1.0 | 0.0 | 1.0 |
| JKBMDFJF_134 | 1.0 | 0.0 | 1.0 |
| JKBMDFJF_135 | 0.0 | 1.0 | 0.0 |
| JKBMDFJF_136 | 1.0 | 0.0 | 1.0 |
| JKBMDFJF_137 | 0.0 | 1.0 | 0.0 |
| JKBMDFJF_138 | 1.0 | 0.0 | 1.0 |
| JKBMDFJF_139 | 0.0 | 1.0 | 0.0 |
| JKBMDFJF_140 | 0.0 | 1.0 | 0.0 |
| JKBMDFJF_141 | 0.0 | 1.0 | 0.0 |
| JKBMDFJF_142 | 1.0 | 0.0 | 1.0 |
| JKBMDFJF_143 | 0.0 | 1.0 | 0.0 |
| JKBMDFJF_144 | 0.0 | 1.0 | 0.0 |
| JKBMDFJF_145 | 1.0 | 0.0 | 1.0 |
| JKBMDFJF_146 | 1.0 | 0.0 | 1.0 |
| JKBMDFJF_147 | 0.0 | 1.0 | 0.0 |
| JKBMDFJF_148 | 0.0 | 1.0 | 0.0 |
| JKBMDFJF_149 | 1.0 | 0.0 | 1.0 |
| JKBMDFJF_150 | 1.0 | 0.0 | 1.0 |
| JKBMDFJF_151 | 1.0 | 0.0 | 1.0 |
| JKBMDFJF_152 | 0.0 | 1.0 | 0.0 |
| JKBMDFJF_153 | 1.0 | 0.0 | 1.0 |
| JKBMDFJF_155 | 1.0 | 0.0 | 1.0 |
| JKBMDFJF_156 | 1.0 | 0.0 | 1.0 |
| JKBMDFJF_157 | 1.0 | 0.0 | 1.0 |
| JKBMDFJF_158 | 1.0 | 0.0 | 1.0 |
| JKBMDFJF_159 | 0.0 | 1.0 | 0.0 |
| JKBMDFJF_160 | 0.0 | 1.0 | 0.0 |
| JKBMDFJF_161 | 1.0 | 0.0 | 1.0 |
| JKBMDFJF_162 | 0.0 | 1.0 | 0.0 |
| JKBMDFJF_163 | 1.0 | 0.0 | 1.0 |
| JKBMDFJF_164 | 1.0 | 0.0 | 1.0 |
| JKBMDFJF_165 | 1.0 | 0.0 | 1.0 |
| JKBMDFJF_166 | 1.0 | 0.0 | 1.0 |
| JKBMDFJF_167 | 1.0 | 0.0 | 1.0 |
| JKBMDFJF_168 | 1.0 | 0.0 | 1.0 |
| JKBMDFJF_169 | 1.0 | 0.0 | 1.0 |
| JKBMDFJF_170 | 0.0 | 1.0 | 0.0 |
| JKBMDFJF_171 | 1.0 | 0.0 | 1.0 |
| JKBMDFJF_172 | 0.0 | 1.0 | 0.0 |
| JKBMDFJF_173 | 1.0 | 0.0 | 1.0 |
| JKBMDFJF_174 | 1.0 | 0.0 | 1.0 |
| JKBMDFJF_175 | 1.0 | 0.0 | 1.0 |
| JKBMDFJF_176 | 1.0 | 0.0 | 1.0 |
| JKBMDFJF_177 | 1.0 | 0.0 | 1.0 |
| JKBMDFJF_178 | 1.0 | 0.0 | 1.0 |
| JKBMDFJF_179 | 1.0 | 0.0 | 1.0 |
| JKBMDFJF_180 | 1.0 | 0.0 | 1.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| JKBMDFJF_2 | 104075 | 120189 | False | Siphoviridae | VOG4569, |
| JKBMDFJF_24 | 111473 | 119044 | False | Siphoviridae | VOG0292, |
| JKBMDFJF_103 | 42177 | 51374 | False | Unknown | VOG3992, |
| JKBMDFJF_109 | 17008 | 28676 | False | Siphoviridae | VOG7268, |
Phigaro v2.4.0 (Database: Jan. 2024 release)