Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 0 | 0 | 1 | 1.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| No hit found | |||||||
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| OPNNGAIA_36 | 47328 | 47522 | CspA | 3.14e-28 | cold shock protein | 83.08 | 98.48 | CAA62903 |
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| OPNNGAIA_11 | 8377 | 9407 | repUS67 | 1038 / 1039 | 87.67 | CP006012 |
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| OPNNGAIA_1 | 0.0 | 1.0 | 0.0 |
| OPNNGAIA_2 | 1.0 | 0.0 | 1.0 |
| OPNNGAIA_5 | 0.0 | 1.0 | 0.0 |
| OPNNGAIA_9 | 0.0 | 1.0 | 0.0 |
| OPNNGAIA_10 | 0.0 | 1.0 | 0.0 |
| OPNNGAIA_11 | 1.0 | 0.0 | 1.0 |
| OPNNGAIA_12 | 0.0 | 1.0 | 0.0 |
| OPNNGAIA_13 | 1.0 | 0.0 | 1.0 |
| OPNNGAIA_14 | 0.0 | 1.0 | 0.0 |
| OPNNGAIA_15 | 0.0 | 1.0 | 0.0 |
| OPNNGAIA_16 | 0.0 | 1.0 | 0.0 |
| OPNNGAIA_17 | 0.0 | 1.0 | 0.0 |
| OPNNGAIA_18 | 0.0 | 1.0 | 0.0 |
| OPNNGAIA_19 | 1.0 | 0.0 | 1.0 |
| OPNNGAIA_20 | 1.0 | 0.0 | 1.0 |
| OPNNGAIA_21 | 1.0 | 0.0 | 1.0 |
| OPNNGAIA_22 | 0.0 | 1.0 | 0.0 |
| OPNNGAIA_23 | 0.0 | 1.0 | 0.0 |
| OPNNGAIA_24 | 0.0 | 1.0 | 0.0 |
| OPNNGAIA_25 | 1.0 | 0.0 | 1.0 |
| OPNNGAIA_26 | 0.0 | 1.0 | 0.0 |
| OPNNGAIA_27 | 0.0 | 1.0 | 0.0 |
| OPNNGAIA_28 | 0.0 | 1.0 | 0.0 |
| OPNNGAIA_29 | 0.0 | 1.0 | 0.0 |
| OPNNGAIA_30 | 0.0 | 1.0 | 0.0 |
| OPNNGAIA_31 | 1.0 | 0.0 | 1.0 |
| OPNNGAIA_32 | 1.0 | 0.0 | 1.0 |
| OPNNGAIA_33 | 0.0 | 1.0 | 0.0 |
| OPNNGAIA_34 | 1.0 | 0.0 | 1.0 |
| OPNNGAIA_35 | 0.0 | 1.0 | 0.0 |
| OPNNGAIA_36 | 0.0 | 1.0 | 0.0 |
| OPNNGAIA_37 | 0.0 | 1.0 | 0.0 |
| OPNNGAIA_38 | 0.0 | 1.0 | 0.0 |
| OPNNGAIA_39 | 0.0 | 1.0 | 0.0 |
| OPNNGAIA_40 | 0.0 | 1.0 | 0.0 |
| OPNNGAIA_41 | 0.0 | 1.0 | 0.0 |
| OPNNGAIA_42 | 1.0 | 0.0 | 1.0 |
| OPNNGAIA_43 | 1.0 | 0.0 | 1.0 |
| OPNNGAIA_44 | 0.0 | 1.0 | 0.0 |
| OPNNGAIA_45 | 0.0 | 1.0 | 0.0 |
| OPNNGAIA_46 | 0.0 | 1.0 | 0.0 |
| OPNNGAIA_47 | 0.0 | 1.0 | 0.0 |
| OPNNGAIA_48 | 0.0 | 1.0 | 0.0 |
| OPNNGAIA_49 | 0.0 | 1.0 | 0.0 |
| OPNNGAIA_50 | 0.0 | 1.0 | 0.0 |
| OPNNGAIA_51 | 0.0 | 1.0 | 0.0 |
| OPNNGAIA_52 | 0.0 | 1.0 | 0.0 |
| OPNNGAIA_53 | 1.0 | 0.0 | 1.0 |
| OPNNGAIA_54 | 0.0 | 1.0 | 0.0 |
| OPNNGAIA_55 | 0.0 | 1.0 | 0.0 |
| OPNNGAIA_57 | 0.0 | 1.0 | 0.0 |
| OPNNGAIA_58 | 0.0 | 1.0 | 0.0 |
| OPNNGAIA_60 | 0.0 | 1.0 | 0.0 |
| OPNNGAIA_61 | 0.0 | 1.0 | 0.0 |
| OPNNGAIA_63 | 0.0 | 1.0 | 0.0 |
| OPNNGAIA_64 | 0.0 | 1.0 | 0.0 |
| OPNNGAIA_65 | 1.0 | 0.0 | 1.0 |
| OPNNGAIA_66 | 0.0 | 1.0 | 0.0 |
| OPNNGAIA_67 | 1.0 | 0.0 | 1.0 |
| OPNNGAIA_68 | 0.0 | 1.0 | 0.0 |
| OPNNGAIA_69 | 0.0 | 1.0 | 0.0 |
| OPNNGAIA_70 | 0.0 | 1.0 | 0.0 |
| OPNNGAIA_71 | 0.0 | 1.0 | 0.0 |
| OPNNGAIA_72 | 0.0 | 1.0 | 0.0 |
| OPNNGAIA_73 | 1.0 | 0.0 | 1.0 |
| OPNNGAIA_74 | 0.0 | 1.0 | 0.0 |
| OPNNGAIA_75 | 0.0 | 1.0 | 0.0 |
| OPNNGAIA_76 | 1.0 | 0.0 | 1.0 |
| OPNNGAIA_77 | 0.0 | 1.0 | 0.0 |
| OPNNGAIA_78 | 0.0 | 1.0 | 0.0 |
| OPNNGAIA_79 | 0.0 | 1.0 | 0.0 |
| OPNNGAIA_81 | 1.0 | 0.0 | 1.0 |
| OPNNGAIA_82 | 0.0 | 1.0 | 0.0 |
| OPNNGAIA_84 | 0.0 | 1.0 | 0.0 |
| OPNNGAIA_85 | 0.0 | 1.0 | 0.0 |
| OPNNGAIA_86 | 0.0 | 1.0 | 0.0 |
| OPNNGAIA_87 | 0.0 | 1.0 | 0.0 |
| OPNNGAIA_88 | 0.0 | 1.0 | 0.0 |
| OPNNGAIA_89 | 1.0 | 0.0 | 1.0 |
| OPNNGAIA_90 | 1.0 | 0.0 | 1.0 |
| OPNNGAIA_91 | 1.0 | 0.0 | 1.0 |
| OPNNGAIA_93 | 0.0 | 1.0 | 0.0 |
| OPNNGAIA_94 | 0.0 | 1.0 | 0.0 |
| OPNNGAIA_95 | 0.0 | 1.0 | 0.0 |
| OPNNGAIA_96 | 0.0 | 1.0 | 0.0 |
| OPNNGAIA_97 | 0.0 | 1.0 | 0.0 |
| OPNNGAIA_98 | 0.0 | 1.0 | 0.0 |
| OPNNGAIA_99 | 0.0 | 1.0 | 0.0 |
| OPNNGAIA_100 | 1.0 | 0.0 | 1.0 |
| OPNNGAIA_102 | 0.0 | 1.0 | 0.0 |
| OPNNGAIA_103 | 1.0 | 0.0 | 1.0 |
| OPNNGAIA_105 | 0.0 | 1.0 | 0.0 |
| OPNNGAIA_106 | 0.0 | 1.0 | 0.0 |
| OPNNGAIA_107 | 1.0 | 0.0 | 1.0 |
| OPNNGAIA_108 | 1.0 | 0.0 | 1.0 |
| OPNNGAIA_109 | 1.0 | 0.0 | 1.0 |
| OPNNGAIA_110 | 0.0 | 1.0 | 0.0 |
| OPNNGAIA_111 | 0.0 | 1.0 | 0.0 |
| OPNNGAIA_112 | 1.0 | 0.0 | 1.0 |
| OPNNGAIA_113 | 1.0 | 0.0 | 1.0 |
| OPNNGAIA_114 | 1.0 | 0.0 | 1.0 |
| OPNNGAIA_116 | 1.0 | 0.0 | 1.0 |
| OPNNGAIA_117 | 1.0 | 0.0 | 1.0 |
| OPNNGAIA_118 | 0.0 | 1.0 | 0.0 |
| OPNNGAIA_120 | 1.0 | 0.0 | 1.0 |
| OPNNGAIA_121 | 0.0 | 1.0 | 0.0 |
| OPNNGAIA_122 | 0.0 | 1.0 | 0.0 |
| OPNNGAIA_124 | 0.0 | 1.0 | 0.0 |
| OPNNGAIA_126 | 1.0 | 0.0 | 1.0 |
| OPNNGAIA_127 | 0.0 | 1.0 | 0.0 |
| OPNNGAIA_128 | 0.0 | 1.0 | 0.0 |
| OPNNGAIA_129 | 1.0 | 0.0 | 1.0 |
| OPNNGAIA_130 | 0.0 | 1.0 | 0.0 |
| OPNNGAIA_131 | 1.0 | 0.0 | 1.0 |
| OPNNGAIA_132 | 0.0 | 1.0 | 0.0 |
| OPNNGAIA_133 | 1.0 | 0.0 | 1.0 |
| OPNNGAIA_134 | 0.0 | 1.0 | 0.0 |
| OPNNGAIA_135 | 1.0 | 0.0 | 1.0 |
| OPNNGAIA_136 | 0.0 | 1.0 | 0.0 |
| OPNNGAIA_137 | 0.0 | 1.0 | 0.0 |
| OPNNGAIA_140 | 1.0 | 0.0 | 1.0 |
| OPNNGAIA_146 | 0.0 | 1.0 | 0.0 |
| OPNNGAIA_148 | 1.0 | 0.0 | 1.0 |
| OPNNGAIA_158 | 0.0 | 1.0 | 0.0 |
| OPNNGAIA_159 | 1.0 | 0.0 | 1.0 |
| OPNNGAIA_170 | 0.0 | 1.0 | 0.0 |
| OPNNGAIA_171 | 0.0 | 1.0 | 0.0 |
| OPNNGAIA_181 | 1.0 | 0.0 | 1.0 |
| OPNNGAIA_183 | 0.0 | 1.0 | 0.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| OPNNGAIA_11 | 12942 | 33671 | False | Siphoviridae | VOG4544, VOG5721, VOG6031, VOG6524, VOG6246, VOG6941, VOG6036, VOG7629, VOG7628, VOG5534, VOG4783, VOG10609, VOG9091, VOG0648, VOG0753, VOG0054 |
| OPNNGAIA_47 | 22237 | 23552 | False | Unknown | VOG0703, VOG9888, VOG8917, VOG3298 |
| OPNNGAIA_50 | 15741 | 39079 | False | Siphoviridae | VOG9997, VOG0565, VOG10972, VOG3462, VOG0801, VOG9813, VOG0660, VOG0209, VOG4586, VOG0207, VOG0205, VOG0204, VOG4553, VOG4573, VOG4556, VOG0202, VOG1886, VOG4581, VOG4841, VOG1345, VOG4972 |
| OPNNGAIA_55 | 21121 | 27908 | False | Myoviridae / Siphoviridae | VOG0414, VOG4552, VOG0694, VOG9667, VOG0535, VOG0283, VOG0514, VOG0226, VOG4566, VOG0189 |
| OPNNGAIA_55 | 32688 | 51070 | False | Myoviridae | VOG0198, VOG4972, VOG0796, VOG4544, VOG0720, VOG4564, VOG10914, VOG4711, VOG1353, VOG1881, VOG1883, VOG1352, VOG4699 |
Phigaro v2.4.0 (Database: Jan. 2024 release)