Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 0 | 0 | 1 | 1.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| No hit found | |||||||
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| OEOPAGLM_98 | 75337 | 75140 | CspA | 2.41e-28 | cold shock protein | 80.30 | 100.00 | CAA62903 |
| OEOPAGLM_98 | 75337 | 75143 | CspR | 1.05e-27 | cold shock protein | 81.54 | 98.48 | AAO82613 |
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| No hit found | ||||||
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| OEOPAGLM_1 | 0.0 | 1.0 | 0.0 |
| OEOPAGLM_2 | 1.0 | 0.0 | 1.0 |
| OEOPAGLM_3 | 0.0 | 1.0 | 0.0 |
| OEOPAGLM_4 | 0.0 | 1.0 | 0.0 |
| OEOPAGLM_5 | 0.0 | 1.0 | 0.0 |
| OEOPAGLM_6 | 0.0 | 1.0 | 0.0 |
| OEOPAGLM_7 | 0.0 | 1.0 | 0.0 |
| OEOPAGLM_8 | 0.0 | 1.0 | 0.0 |
| OEOPAGLM_9 | 0.0 | 1.0 | 0.0 |
| OEOPAGLM_10 | 0.0 | 1.0 | 0.0 |
| OEOPAGLM_11 | 0.0 | 1.0 | 0.0 |
| OEOPAGLM_12 | 0.0 | 1.0 | 0.0 |
| OEOPAGLM_14 | 0.0 | 1.0 | 0.0 |
| OEOPAGLM_15 | 0.0 | 1.0 | 0.0 |
| OEOPAGLM_16 | 0.0 | 1.0 | 0.0 |
| OEOPAGLM_17 | 1.0 | 0.0 | 1.0 |
| OEOPAGLM_18 | 1.0 | 0.0 | 1.0 |
| OEOPAGLM_19 | 0.0 | 1.0 | 0.0 |
| OEOPAGLM_20 | 0.0 | 1.0 | 0.0 |
| OEOPAGLM_21 | 0.0 | 1.0 | 0.0 |
| OEOPAGLM_22 | 0.0 | 1.0 | 0.0 |
| OEOPAGLM_23 | 0.0 | 1.0 | 0.0 |
| OEOPAGLM_24 | 1.0 | 0.0 | 1.0 |
| OEOPAGLM_25 | 1.0 | 0.0 | 1.0 |
| OEOPAGLM_26 | 0.0 | 1.0 | 0.0 |
| OEOPAGLM_27 | 1.0 | 0.0 | 1.0 |
| OEOPAGLM_28 | 0.0 | 1.0 | 0.0 |
| OEOPAGLM_29 | 1.0 | 0.0 | 1.0 |
| OEOPAGLM_30 | 1.0 | 0.0 | 1.0 |
| OEOPAGLM_31 | 0.0 | 1.0 | 0.0 |
| OEOPAGLM_32 | 1.0 | 0.0 | 1.0 |
| OEOPAGLM_33 | 0.0 | 1.0 | 0.0 |
| OEOPAGLM_34 | 1.0 | 0.0 | 1.0 |
| OEOPAGLM_35 | 0.0 | 1.0 | 0.0 |
| OEOPAGLM_36 | 0.0 | 1.0 | 0.0 |
| OEOPAGLM_37 | 1.0 | 0.0 | 1.0 |
| OEOPAGLM_38 | 1.0 | 0.0 | 1.0 |
| OEOPAGLM_39 | 1.0 | 0.0 | 1.0 |
| OEOPAGLM_41 | 0.0 | 1.0 | 0.0 |
| OEOPAGLM_42 | 0.0 | 1.0 | 0.0 |
| OEOPAGLM_43 | 0.0 | 1.0 | 0.0 |
| OEOPAGLM_44 | 1.0 | 0.0 | 1.0 |
| OEOPAGLM_45 | 1.0 | 0.0 | 1.0 |
| OEOPAGLM_46 | 0.0 | 1.0 | 0.0 |
| OEOPAGLM_47 | 1.0 | 0.0 | 1.0 |
| OEOPAGLM_48 | 0.0 | 1.0 | 0.0 |
| OEOPAGLM_49 | 0.0 | 1.0 | 0.0 |
| OEOPAGLM_50 | 1.0 | 0.0 | 1.0 |
| OEOPAGLM_51 | 0.0 | 1.0 | 0.0 |
| OEOPAGLM_52 | 1.0 | 0.0 | 1.0 |
| OEOPAGLM_53 | 1.0 | 0.0 | 1.0 |
| OEOPAGLM_54 | 1.0 | 0.0 | 1.0 |
| OEOPAGLM_58 | 0.0 | 1.0 | 0.0 |
| OEOPAGLM_62 | 1.0 | 0.0 | 1.0 |
| OEOPAGLM_70 | 0.0 | 1.0 | 0.0 |
| OEOPAGLM_73 | 1.0 | 0.0 | 1.0 |
| OEOPAGLM_80 | 0.0 | 1.0 | 0.0 |
| OEOPAGLM_81 | 0.0 | 1.0 | 0.0 |
| OEOPAGLM_82 | 0.0 | 1.0 | 0.0 |
| OEOPAGLM_83 | 1.0 | 0.0 | 1.0 |
| OEOPAGLM_84 | 0.0 | 1.0 | 0.0 |
| OEOPAGLM_85 | 0.0 | 1.0 | 0.0 |
| OEOPAGLM_86 | 0.0 | 1.0 | 0.0 |
| OEOPAGLM_87 | 0.0 | 1.0 | 0.0 |
| OEOPAGLM_88 | 0.0 | 1.0 | 0.0 |
| OEOPAGLM_89 | 0.0 | 1.0 | 0.0 |
| OEOPAGLM_90 | 0.0 | 1.0 | 0.0 |
| OEOPAGLM_91 | 0.0 | 1.0 | 0.0 |
| OEOPAGLM_92 | 0.0 | 1.0 | 0.0 |
| OEOPAGLM_93 | 0.0 | 1.0 | 0.0 |
| OEOPAGLM_94 | 0.0 | 1.0 | 0.0 |
| OEOPAGLM_95 | 0.0 | 1.0 | 0.0 |
| OEOPAGLM_96 | 0.0 | 1.0 | 0.0 |
| OEOPAGLM_97 | 0.0 | 1.0 | 0.0 |
| OEOPAGLM_98 | 0.0 | 1.0 | 0.0 |
| OEOPAGLM_99 | 0.0 | 1.0 | 0.0 |
| OEOPAGLM_100 | 0.0 | 1.0 | 0.0 |
| OEOPAGLM_101 | 0.0 | 1.0 | 0.0 |
| OEOPAGLM_102 | 0.0 | 1.0 | 0.0 |
| OEOPAGLM_103 | 0.0 | 1.0 | 0.0 |
| OEOPAGLM_104 | 0.0 | 1.0 | 0.0 |
| OEOPAGLM_106 | 0.0 | 1.0 | 0.0 |
| OEOPAGLM_107 | 0.0 | 1.0 | 0.0 |
| OEOPAGLM_108 | 1.0 | 0.0 | 1.0 |
| OEOPAGLM_109 | 0.0 | 1.0 | 0.0 |
| OEOPAGLM_110 | 0.0 | 1.0 | 0.0 |
| OEOPAGLM_111 | 0.0 | 1.0 | 0.0 |
| OEOPAGLM_112 | 0.0 | 1.0 | 0.0 |
| OEOPAGLM_113 | 0.0 | 1.0 | 0.0 |
| OEOPAGLM_114 | 0.0 | 1.0 | 0.0 |
| OEOPAGLM_115 | 0.0 | 1.0 | 0.0 |
| OEOPAGLM_116 | 0.0 | 1.0 | 0.0 |
| OEOPAGLM_117 | 0.0 | 1.0 | 0.0 |
| OEOPAGLM_118 | 1.0 | 0.0 | 1.0 |
| OEOPAGLM_119 | 0.0 | 1.0 | 0.0 |
| OEOPAGLM_120 | 0.0 | 1.0 | 0.0 |
| OEOPAGLM_121 | 0.0 | 1.0 | 0.0 |
| OEOPAGLM_122 | 0.0 | 1.0 | 0.0 |
| OEOPAGLM_123 | 1.0 | 0.0 | 1.0 |
| OEOPAGLM_124 | 0.0 | 1.0 | 0.0 |
| OEOPAGLM_125 | 0.0 | 1.0 | 0.0 |
| OEOPAGLM_126 | 1.0 | 0.0 | 1.0 |
| OEOPAGLM_127 | 0.0 | 1.0 | 0.0 |
| OEOPAGLM_128 | 0.0 | 1.0 | 0.0 |
| OEOPAGLM_129 | 0.0 | 1.0 | 0.0 |
| OEOPAGLM_130 | 0.0 | 1.0 | 0.0 |
| OEOPAGLM_131 | 1.0 | 0.0 | 1.0 |
| OEOPAGLM_132 | 0.0 | 1.0 | 0.0 |
| OEOPAGLM_133 | 0.0 | 1.0 | 0.0 |
| OEOPAGLM_134 | 0.0 | 1.0 | 0.0 |
| OEOPAGLM_135 | 1.0 | 0.0 | 1.0 |
| OEOPAGLM_136 | 0.0 | 1.0 | 0.0 |
| OEOPAGLM_137 | 0.0 | 1.0 | 0.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| OEOPAGLM_81 | 11811 | 36197 | False | Siphoviridae | VOG8239, VOG6422, VOG8294, VOG0641, VOG0648, VOG4599, VOG0727, VOG4545, VOG0725, VOG0799, VOG0724, VOG5660, VOG0723, VOG4713, VOG1319, VOG10914, VOG8945, VOG4564, VOG0720, VOG10227 |
Phigaro v2.4.0 (Database: Jan. 2024 release)