Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 0 | 0 | 0 | 0.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| No hit found | |||||||
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| No hit found | ||||||
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| NHMLFFNE_1 | 0.0 | 1.0 | 0.0 |
| NHMLFFNE_2 | 0.0 | 1.0 | 0.0 |
| NHMLFFNE_3 | 0.0 | 1.0 | 0.0 |
| NHMLFFNE_4 | 0.0 | 1.0 | 0.0 |
| NHMLFFNE_5 | 0.0 | 1.0 | 0.0 |
| NHMLFFNE_6 | 1.0 | 0.0 | 1.0 |
| NHMLFFNE_7 | 1.0 | 0.0 | 1.0 |
| NHMLFFNE_8 | 0.0 | 1.0 | 0.0 |
| NHMLFFNE_9 | 0.0 | 1.0 | 0.0 |
| NHMLFFNE_10 | 1.0 | 0.0 | 1.0 |
| NHMLFFNE_11 | 0.0 | 1.0 | 0.0 |
| NHMLFFNE_13 | 0.0 | 1.0 | 0.0 |
| NHMLFFNE_14 | 0.0 | 1.0 | 0.0 |
| NHMLFFNE_15 | 1.0 | 0.0 | 1.0 |
| NHMLFFNE_16 | 0.0 | 1.0 | 0.0 |
| NHMLFFNE_17 | 0.0 | 1.0 | 0.0 |
| NHMLFFNE_18 | 0.0 | 1.0 | 0.0 |
| NHMLFFNE_19 | 1.0 | 0.0 | 1.0 |
| NHMLFFNE_20 | 0.0 | 1.0 | 0.0 |
| NHMLFFNE_21 | 0.0 | 1.0 | 0.0 |
| NHMLFFNE_22 | 0.0 | 1.0 | 0.0 |
| NHMLFFNE_23 | 1.0 | 0.0 | 1.0 |
| NHMLFFNE_24 | 0.0 | 1.0 | 0.0 |
| NHMLFFNE_25 | 1.0 | 0.0 | 1.0 |
| NHMLFFNE_26 | 1.0 | 0.0 | 1.0 |
| NHMLFFNE_27 | 0.0 | 1.0 | 0.0 |
| NHMLFFNE_28 | 1.0 | 0.0 | 1.0 |
| NHMLFFNE_29 | 0.0 | 1.0 | 0.0 |
| NHMLFFNE_30 | 0.0 | 1.0 | 0.0 |
| NHMLFFNE_31 | 0.0 | 1.0 | 0.0 |
| NHMLFFNE_32 | 1.0 | 0.0 | 1.0 |
| NHMLFFNE_33 | 1.0 | 0.0 | 1.0 |
| NHMLFFNE_34 | 0.0 | 1.0 | 0.0 |
| NHMLFFNE_35 | 0.0 | 1.0 | 0.0 |
| NHMLFFNE_36 | 1.0 | 0.0 | 1.0 |
| NHMLFFNE_37 | 1.0 | 0.0 | 1.0 |
| NHMLFFNE_38 | 1.0 | 0.0 | 1.0 |
| NHMLFFNE_39 | 1.0 | 0.0 | 1.0 |
| NHMLFFNE_40 | 1.0 | 0.0 | 1.0 |
| NHMLFFNE_41 | 0.0 | 1.0 | 0.0 |
| NHMLFFNE_42 | 0.0 | 1.0 | 0.0 |
| NHMLFFNE_43 | 0.0 | 1.0 | 0.0 |
| NHMLFFNE_44 | 1.0 | 0.0 | 1.0 |
| NHMLFFNE_45 | 1.0 | 0.0 | 1.0 |
| NHMLFFNE_46 | 0.0 | 1.0 | 0.0 |
| NHMLFFNE_47 | 0.0 | 1.0 | 0.0 |
| NHMLFFNE_48 | 1.0 | 0.0 | 1.0 |
| NHMLFFNE_49 | 1.0 | 0.0 | 1.0 |
| NHMLFFNE_50 | 0.0 | 1.0 | 0.0 |
| NHMLFFNE_51 | 0.0 | 1.0 | 0.0 |
| NHMLFFNE_52 | 1.0 | 0.0 | 1.0 |
| NHMLFFNE_53 | 0.0 | 1.0 | 0.0 |
| NHMLFFNE_54 | 1.0 | 0.0 | 1.0 |
| NHMLFFNE_55 | 0.0 | 1.0 | 0.0 |
| NHMLFFNE_56 | 0.0 | 1.0 | 0.0 |
| NHMLFFNE_57 | 0.0 | 1.0 | 0.0 |
| NHMLFFNE_58 | 0.0 | 1.0 | 0.0 |
| NHMLFFNE_59 | 1.0 | 0.0 | 1.0 |
| NHMLFFNE_60 | 0.0 | 1.0 | 0.0 |
| NHMLFFNE_61 | 0.0 | 1.0 | 0.0 |
| NHMLFFNE_62 | 0.0 | 1.0 | 0.0 |
| NHMLFFNE_63 | 1.0 | 0.0 | 1.0 |
| NHMLFFNE_64 | 0.0 | 1.0 | 0.0 |
| NHMLFFNE_65 | 0.0 | 1.0 | 0.0 |
| NHMLFFNE_66 | 1.0 | 0.0 | 1.0 |
| NHMLFFNE_67 | 0.0 | 1.0 | 0.0 |
| NHMLFFNE_68 | 1.0 | 0.0 | 1.0 |
| NHMLFFNE_69 | 0.0 | 1.0 | 0.0 |
| NHMLFFNE_70 | 1.0 | 0.0 | 1.0 |
| NHMLFFNE_71 | 1.0 | 0.0 | 1.0 |
| NHMLFFNE_72 | 0.0 | 1.0 | 0.0 |
| NHMLFFNE_74 | 1.0 | 0.0 | 1.0 |
| NHMLFFNE_76 | 0.0 | 1.0 | 0.0 |
| NHMLFFNE_77 | 0.0 | 1.0 | 0.0 |
| NHMLFFNE_78 | 1.0 | 0.0 | 1.0 |
| NHMLFFNE_79 | 0.0 | 1.0 | 0.0 |
| NHMLFFNE_80 | 0.0 | 1.0 | 0.0 |
| NHMLFFNE_83 | 1.0 | 0.0 | 1.0 |
| NHMLFFNE_84 | 1.0 | 0.0 | 1.0 |
| NHMLFFNE_85 | 1.0 | 0.0 | 1.0 |
| NHMLFFNE_86 | 1.0 | 0.0 | 1.0 |
| NHMLFFNE_87 | 1.0 | 0.0 | 1.0 |
| NHMLFFNE_88 | 0.0 | 1.0 | 0.0 |
| NHMLFFNE_89 | 1.0 | 0.0 | 1.0 |
| NHMLFFNE_90 | 0.0 | 1.0 | 0.0 |
| NHMLFFNE_91 | 0.0 | 1.0 | 0.0 |
| NHMLFFNE_92 | 1.0 | 0.0 | 1.0 |
| NHMLFFNE_93 | 0.0 | 1.0 | 0.0 |
| NHMLFFNE_101 | 0.0 | 1.0 | 0.0 |
| NHMLFFNE_102 | 0.0 | 1.0 | 0.0 |
| NHMLFFNE_112 | 0.0 | 1.0 | 0.0 |
| NHMLFFNE_113 | 0.0 | 1.0 | 0.0 |
| NHMLFFNE_124 | 0.0 | 1.0 | 0.0 |
| NHMLFFNE_126 | 0.0 | 1.0 | 0.0 |
| NHMLFFNE_135 | 1.0 | 0.0 | 1.0 |
| NHMLFFNE_138 | 0.0 | 1.0 | 0.0 |
| NHMLFFNE_139 | 0.0 | 1.0 | 0.0 |
| NHMLFFNE_146 | 0.0 | 1.0 | 0.0 |
| NHMLFFNE_151 | 0.0 | 1.0 | 0.0 |
| NHMLFFNE_157 | 0.0 | 1.0 | 0.0 |
| NHMLFFNE_163 | 0.0 | 1.0 | 0.0 |
| NHMLFFNE_168 | 0.0 | 1.0 | 0.0 |
| NHMLFFNE_175 | 0.0 | 1.0 | 0.0 |
| NHMLFFNE_179 | 0.0 | 1.0 | 0.0 |
| NHMLFFNE_187 | 0.0 | 1.0 | 0.0 |
| NHMLFFNE_190 | 0.0 | 1.0 | 0.0 |
| NHMLFFNE_199 | 0.0 | 1.0 | 0.0 |
| NHMLFFNE_201 | 0.0 | 1.0 | 0.0 |
| NHMLFFNE_211 | 0.0 | 1.0 | 0.0 |
| NHMLFFNE_212 | 0.0 | 1.0 | 0.0 |
| NHMLFFNE_223 | 0.0 | 1.0 | 0.0 |
| NHMLFFNE_224 | 0.0 | 1.0 | 0.0 |
| NHMLFFNE_225 | 0.0 | 1.0 | 0.0 |
| NHMLFFNE_235 | 0.0 | 1.0 | 0.0 |
| NHMLFFNE_237 | 0.0 | 1.0 | 0.0 |
| NHMLFFNE_245 | 1.0 | 0.0 | 1.0 |
| NHMLFFNE_248 | 0.0 | 1.0 | 0.0 |
| NHMLFFNE_251 | 0.0 | 1.0 | 0.0 |
| NHMLFFNE_252 | 0.0 | 1.0 | 0.0 |
| NHMLFFNE_253 | 0.0 | 1.0 | 0.0 |
| NHMLFFNE_254 | 0.0 | 1.0 | 0.0 |
| NHMLFFNE_255 | 0.0 | 1.0 | 0.0 |
| NHMLFFNE_256 | 0.0 | 1.0 | 0.0 |
| NHMLFFNE_257 | 0.0 | 1.0 | 0.0 |
| NHMLFFNE_258 | 0.0 | 1.0 | 0.0 |
| NHMLFFNE_259 | 0.0 | 1.0 | 0.0 |
| NHMLFFNE_260 | 0.0 | 1.0 | 0.0 |
| NHMLFFNE_261 | 0.0 | 1.0 | 0.0 |
| NHMLFFNE_262 | 0.0 | 1.0 | 0.0 |
| NHMLFFNE_263 | 0.0 | 1.0 | 0.0 |
| NHMLFFNE_264 | 1.0 | 0.0 | 1.0 |
| NHMLFFNE_265 | 0.0 | 1.0 | 0.0 |
| NHMLFFNE_266 | 0.0 | 1.0 | 0.0 |
| NHMLFFNE_267 | 0.0 | 1.0 | 0.0 |
| NHMLFFNE_268 | 0.0 | 1.0 | 0.0 |
| NHMLFFNE_269 | 0.0 | 1.0 | 0.0 |
| NHMLFFNE_270 | 0.0 | 1.0 | 0.0 |
| NHMLFFNE_271 | 0.0 | 1.0 | 0.0 |
| NHMLFFNE_272 | 0.0 | 1.0 | 0.0 |
| NHMLFFNE_273 | 0.0 | 1.0 | 0.0 |
| NHMLFFNE_274 | 0.0 | 1.0 | 0.0 |
| NHMLFFNE_275 | 0.0 | 1.0 | 0.0 |
| NHMLFFNE_276 | 0.0 | 1.0 | 0.0 |
| NHMLFFNE_277 | 0.0 | 1.0 | 0.0 |
| NHMLFFNE_278 | 0.0 | 1.0 | 0.0 |
| NHMLFFNE_279 | 0.0 | 1.0 | 0.0 |
| NHMLFFNE_280 | 0.0 | 1.0 | 0.0 |
| NHMLFFNE_281 | 1.0 | 0.0 | 1.0 |
| NHMLFFNE_282 | 0.0 | 1.0 | 0.0 |
| NHMLFFNE_283 | 0.0 | 1.0 | 0.0 |
| NHMLFFNE_284 | 0.0 | 1.0 | 0.0 |
| NHMLFFNE_285 | 0.0 | 1.0 | 0.0 |
| NHMLFFNE_286 | 0.0 | 1.0 | 0.0 |
| NHMLFFNE_287 | 0.0 | 1.0 | 0.0 |
| NHMLFFNE_288 | 0.0 | 1.0 | 0.0 |
| NHMLFFNE_289 | 0.0 | 1.0 | 0.0 |
| NHMLFFNE_290 | 0.0 | 1.0 | 0.0 |
| NHMLFFNE_291 | 0.0 | 1.0 | 0.0 |
| NHMLFFNE_292 | 0.0 | 1.0 | 0.0 |
| NHMLFFNE_293 | 0.0 | 1.0 | 0.0 |
| NHMLFFNE_294 | 0.0 | 1.0 | 0.0 |
| NHMLFFNE_295 | 0.0 | 1.0 | 0.0 |
| NHMLFFNE_296 | 0.0 | 1.0 | 0.0 |
| NHMLFFNE_297 | 0.0 | 1.0 | 0.0 |
| NHMLFFNE_298 | 0.0 | 1.0 | 0.0 |
| NHMLFFNE_299 | 0.0 | 1.0 | 0.0 |
| NHMLFFNE_300 | 1.0 | 0.0 | 1.0 |
| NHMLFFNE_301 | 0.0 | 1.0 | 0.0 |
| NHMLFFNE_302 | 0.0 | 1.0 | 0.0 |
| NHMLFFNE_303 | 0.0 | 1.0 | 0.0 |
| NHMLFFNE_304 | 0.0 | 1.0 | 0.0 |
| NHMLFFNE_305 | 0.0 | 1.0 | 0.0 |
| NHMLFFNE_306 | 0.0 | 1.0 | 0.0 |
| NHMLFFNE_307 | 0.0 | 1.0 | 0.0 |
| NHMLFFNE_308 | 0.0 | 1.0 | 0.0 |
| NHMLFFNE_309 | 0.0 | 1.0 | 0.0 |
| NHMLFFNE_310 | 0.0 | 1.0 | 0.0 |
| NHMLFFNE_311 | 0.0 | 1.0 | 0.0 |
| NHMLFFNE_312 | 0.0 | 1.0 | 0.0 |
| NHMLFFNE_313 | 1.0 | 0.0 | 1.0 |
| NHMLFFNE_314 | 0.0 | 1.0 | 0.0 |
| NHMLFFNE_315 | 0.0 | 1.0 | 0.0 |
| NHMLFFNE_316 | 0.0 | 1.0 | 0.0 |
| NHMLFFNE_317 | 0.0 | 1.0 | 0.0 |
| NHMLFFNE_318 | 1.0 | 0.0 | 1.0 |
| NHMLFFNE_319 | 0.0 | 1.0 | 0.0 |
| NHMLFFNE_320 | 0.0 | 1.0 | 0.0 |
| NHMLFFNE_321 | 0.0 | 1.0 | 0.0 |
| NHMLFFNE_322 | 0.0 | 1.0 | 0.0 |
| NHMLFFNE_323 | 0.0 | 1.0 | 0.0 |
| NHMLFFNE_324 | 1.0 | 0.0 | 1.0 |
| NHMLFFNE_325 | 0.0 | 1.0 | 0.0 |
| NHMLFFNE_326 | 0.0 | 1.0 | 0.0 |
| NHMLFFNE_327 | 0.0 | 1.0 | 0.0 |
| NHMLFFNE_328 | 0.0 | 1.0 | 0.0 |
| NHMLFFNE_330 | 1.0 | 0.0 | 1.0 |
| NHMLFFNE_331 | 0.0 | 1.0 | 0.0 |
| NHMLFFNE_332 | 0.0 | 1.0 | 0.0 |
| NHMLFFNE_333 | 0.0 | 1.0 | 0.0 |
| NHMLFFNE_334 | 0.0 | 1.0 | 0.0 |
| NHMLFFNE_335 | 0.0 | 1.0 | 0.0 |
| NHMLFFNE_336 | 0.0 | 1.0 | 0.0 |
| NHMLFFNE_337 | 0.0 | 1.0 | 0.0 |
| NHMLFFNE_338 | 0.0 | 1.0 | 0.0 |
| NHMLFFNE_339 | 0.0 | 1.0 | 0.0 |
| NHMLFFNE_340 | 0.0 | 1.0 | 0.0 |
| NHMLFFNE_341 | 0.0 | 1.0 | 0.0 |
| NHMLFFNE_342 | 0.0 | 1.0 | 0.0 |
| NHMLFFNE_343 | 0.0 | 1.0 | 0.0 |
| NHMLFFNE_344 | 1.0 | 0.0 | 1.0 |
| NHMLFFNE_345 | 0.0 | 1.0 | 0.0 |
| NHMLFFNE_346 | 0.0 | 1.0 | 0.0 |
| NHMLFFNE_347 | 0.0 | 1.0 | 0.0 |
| NHMLFFNE_348 | 0.0 | 1.0 | 0.0 |
| NHMLFFNE_349 | 0.0 | 1.0 | 0.0 |
| NHMLFFNE_350 | 1.0 | 0.0 | 1.0 |
| NHMLFFNE_351 | 1.0 | 0.0 | 1.0 |
| NHMLFFNE_352 | 0.0 | 1.0 | 0.0 |
| NHMLFFNE_353 | 1.0 | 0.0 | 1.0 |
| NHMLFFNE_354 | 1.0 | 0.0 | 1.0 |
| NHMLFFNE_355 | 0.0 | 1.0 | 0.0 |
| NHMLFFNE_356 | 1.0 | 0.0 | 1.0 |
| NHMLFFNE_357 | 1.0 | 0.0 | 1.0 |
| NHMLFFNE_358 | 0.0 | 1.0 | 0.0 |
| NHMLFFNE_359 | 0.0 | 1.0 | 0.0 |
| NHMLFFNE_360 | 1.0 | 0.0 | 1.0 |
| NHMLFFNE_361 | 1.0 | 0.0 | 1.0 |
| NHMLFFNE_362 | 0.0 | 1.0 | 0.0 |
| NHMLFFNE_363 | 0.0 | 1.0 | 0.0 |
| NHMLFFNE_364 | 0.0 | 1.0 | 0.0 |
| NHMLFFNE_365 | 0.0 | 1.0 | 0.0 |
| NHMLFFNE_366 | 0.0 | 1.0 | 0.0 |
| NHMLFFNE_367 | 0.0 | 1.0 | 0.0 |
| NHMLFFNE_369 | 0.0 | 1.0 | 0.0 |
| NHMLFFNE_370 | 1.0 | 0.0 | 1.0 |
| NHMLFFNE_371 | 1.0 | 0.0 | 1.0 |
| NHMLFFNE_372 | 0.0 | 1.0 | 0.0 |
| NHMLFFNE_373 | 1.0 | 0.0 | 1.0 |
| NHMLFFNE_374 | 1.0 | 0.0 | 1.0 |
| NHMLFFNE_375 | 1.0 | 0.0 | 1.0 |
| NHMLFFNE_376 | 0.0 | 1.0 | 0.0 |
| NHMLFFNE_377 | 0.0 | 1.0 | 0.0 |
| NHMLFFNE_378 | 0.0 | 1.0 | 0.0 |
| NHMLFFNE_379 | 0.0 | 1.0 | 0.0 |
| NHMLFFNE_380 | 0.0 | 1.0 | 0.0 |
| NHMLFFNE_381 | 0.0 | 1.0 | 0.0 |
| NHMLFFNE_382 | 0.0 | 1.0 | 0.0 |
| NHMLFFNE_383 | 0.0 | 1.0 | 0.0 |
| NHMLFFNE_384 | 0.0 | 1.0 | 0.0 |
| NHMLFFNE_385 | 1.0 | 0.0 | 1.0 |
| NHMLFFNE_386 | 0.0 | 1.0 | 0.0 |
| NHMLFFNE_387 | 0.0 | 1.0 | 0.0 |
| NHMLFFNE_388 | 0.0 | 1.0 | 0.0 |
| NHMLFFNE_389 | 1.0 | 0.0 | 1.0 |
| NHMLFFNE_390 | 1.0 | 0.0 | 1.0 |
| NHMLFFNE_391 | 1.0 | 0.0 | 1.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| NHMLFFNE_1 | 16399 | 46557 | True | Siphoviridae | VOG4571, VOG0052, VOG3480, VOG7438, VOG1047, VOG0021, VOG0026, VOG8005, VOG4606, VOG0327, VOG4548, VOG0198, VOG4581, VOG4571, VOG4544, VOG4556, VOG4573, VOG4553, VOG0204, VOG4589, VOG0641, VOG9502, VOG9409, VOG0221, VOG0221 |
| NHMLFFNE_357 | 1883 | 21060 | False | Siphoviridae | VOG10972, VOG3462, VOG0801, VOG4052, VOG0209, VOG0207, VOG0205, VOG0204, VOG4553, VOG4573, VOG4556, VOG0202, VOG1886, VOG4581 |
Phigaro v2.4.0 (Database: Jan. 2024 release)