Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 0 | 0 | 1 | 1.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| No hit found | |||||||
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| FBFDKBKE_56 | 25347 | 25153 | CspA | 3.19e-29 | cold shock protein | 84.61 | 98.48 | CAA62903 |
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| No hit found | ||||||
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| FBFDKBKE_1 | 0.0 | 1.0 | 0.0 |
| FBFDKBKE_2 | 0.0 | 1.0 | 0.0 |
| FBFDKBKE_13 | 0.0 | 1.0 | 0.0 |
| FBFDKBKE_24 | 0.0 | 1.0 | 0.0 |
| FBFDKBKE_27 | 0.0 | 1.0 | 0.0 |
| FBFDKBKE_28 | 0.0 | 1.0 | 0.0 |
| FBFDKBKE_29 | 0.0 | 1.0 | 0.0 |
| FBFDKBKE_30 | 0.0 | 1.0 | 0.0 |
| FBFDKBKE_31 | 0.0 | 1.0 | 0.0 |
| FBFDKBKE_32 | 0.0 | 1.0 | 0.0 |
| FBFDKBKE_33 | 0.0 | 1.0 | 0.0 |
| FBFDKBKE_34 | 0.0 | 1.0 | 0.0 |
| FBFDKBKE_35 | 0.0 | 1.0 | 0.0 |
| FBFDKBKE_36 | 0.0 | 1.0 | 0.0 |
| FBFDKBKE_37 | 0.0 | 1.0 | 0.0 |
| FBFDKBKE_38 | 0.0 | 1.0 | 0.0 |
| FBFDKBKE_39 | 0.0 | 1.0 | 0.0 |
| FBFDKBKE_40 | 0.0 | 1.0 | 0.0 |
| FBFDKBKE_41 | 0.0 | 1.0 | 0.0 |
| FBFDKBKE_42 | 0.0 | 1.0 | 0.0 |
| FBFDKBKE_43 | 0.0 | 1.0 | 0.0 |
| FBFDKBKE_44 | 0.0 | 1.0 | 0.0 |
| FBFDKBKE_45 | 0.0 | 1.0 | 0.0 |
| FBFDKBKE_46 | 0.0 | 1.0 | 0.0 |
| FBFDKBKE_47 | 0.0 | 1.0 | 0.0 |
| FBFDKBKE_48 | 0.0 | 1.0 | 0.0 |
| FBFDKBKE_49 | 0.0 | 1.0 | 0.0 |
| FBFDKBKE_50 | 0.0 | 1.0 | 0.0 |
| FBFDKBKE_51 | 0.0 | 1.0 | 0.0 |
| FBFDKBKE_52 | 0.0 | 1.0 | 0.0 |
| FBFDKBKE_53 | 0.0 | 1.0 | 0.0 |
| FBFDKBKE_54 | 0.0 | 1.0 | 0.0 |
| FBFDKBKE_55 | 0.0 | 1.0 | 0.0 |
| FBFDKBKE_56 | 0.0 | 1.0 | 0.0 |
| FBFDKBKE_57 | 1.0 | 0.0 | 1.0 |
| FBFDKBKE_58 | 0.0 | 1.0 | 0.0 |
| FBFDKBKE_59 | 0.0 | 1.0 | 0.0 |
| FBFDKBKE_60 | 0.0 | 1.0 | 0.0 |
| FBFDKBKE_61 | 0.0 | 1.0 | 0.0 |
| FBFDKBKE_62 | 0.0 | 1.0 | 0.0 |
| FBFDKBKE_63 | 0.0 | 1.0 | 0.0 |
| FBFDKBKE_64 | 0.0 | 1.0 | 0.0 |
| FBFDKBKE_65 | 0.0 | 1.0 | 0.0 |
| FBFDKBKE_66 | 0.0 | 1.0 | 0.0 |
| FBFDKBKE_67 | 0.0 | 1.0 | 0.0 |
| FBFDKBKE_68 | 0.0 | 1.0 | 0.0 |
| FBFDKBKE_69 | 0.0 | 1.0 | 0.0 |
| FBFDKBKE_70 | 0.0 | 1.0 | 0.0 |
| FBFDKBKE_71 | 0.0 | 1.0 | 0.0 |
| FBFDKBKE_72 | 1.0 | 0.0 | 1.0 |
| FBFDKBKE_73 | 0.0 | 1.0 | 0.0 |
| FBFDKBKE_74 | 0.0 | 1.0 | 0.0 |
| FBFDKBKE_75 | 0.0 | 1.0 | 0.0 |
| FBFDKBKE_76 | 0.0 | 1.0 | 0.0 |
| FBFDKBKE_77 | 0.0 | 1.0 | 0.0 |
| FBFDKBKE_78 | 0.0 | 1.0 | 0.0 |
| FBFDKBKE_79 | 0.0 | 1.0 | 0.0 |
| FBFDKBKE_80 | 0.0 | 1.0 | 0.0 |
| FBFDKBKE_81 | 0.0 | 1.0 | 0.0 |
| FBFDKBKE_82 | 0.0 | 1.0 | 0.0 |
| FBFDKBKE_83 | 0.0 | 1.0 | 0.0 |
| FBFDKBKE_84 | 1.0 | 0.0 | 1.0 |
| FBFDKBKE_85 | 0.0 | 1.0 | 0.0 |
| FBFDKBKE_86 | 1.0 | 0.0 | 1.0 |
| FBFDKBKE_87 | 0.0 | 1.0 | 0.0 |
| FBFDKBKE_88 | 0.0 | 1.0 | 0.0 |
| FBFDKBKE_89 | 0.0 | 1.0 | 0.0 |
| FBFDKBKE_90 | 0.0 | 1.0 | 0.0 |
| FBFDKBKE_91 | 1.0 | 0.0 | 1.0 |
| FBFDKBKE_92 | 1.0 | 0.0 | 1.0 |
| FBFDKBKE_94 | 1.0 | 0.0 | 1.0 |
| FBFDKBKE_95 | 0.0 | 1.0 | 0.0 |
| FBFDKBKE_96 | 0.0 | 1.0 | 0.0 |
| FBFDKBKE_97 | 1.0 | 0.0 | 1.0 |
| FBFDKBKE_98 | 1.0 | 0.0 | 1.0 |
| FBFDKBKE_99 | 0.0 | 1.0 | 0.0 |
| FBFDKBKE_100 | 0.0 | 1.0 | 0.0 |
| FBFDKBKE_101 | 0.0 | 1.0 | 0.0 |
| FBFDKBKE_102 | 0.0 | 1.0 | 0.0 |
| FBFDKBKE_104 | 1.0 | 0.0 | 1.0 |
| FBFDKBKE_105 | 1.0 | 0.0 | 1.0 |
| FBFDKBKE_106 | 1.0 | 0.0 | 1.0 |
| FBFDKBKE_107 | 0.0 | 1.0 | 0.0 |
| FBFDKBKE_108 | 1.0 | 0.0 | 1.0 |
| FBFDKBKE_109 | 1.0 | 0.0 | 1.0 |
| FBFDKBKE_110 | 0.0 | 1.0 | 0.0 |
| FBFDKBKE_111 | 0.0 | 1.0 | 0.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| FBFDKBKE_1 | 49349 | 57861 | False | Siphoviridae | VOG9888, VOG0982, VOG9667, VOG3622, VOG4904, VOG9706, VOG5878, VOG0275, VOG0195 |
| FBFDKBKE_1 | 61565 | 85975 | False | Siphoviridae | VOG0198, VOG0866, VOG4841, VOG4581, VOG9312, VOG0866, VOG1886, VOG4556, VOG4573, VOG4553, VOG0204, VOG0205, VOG0207, VOG0209, VOG6163, VOG0801, VOG3462, VOG3463, VOG4763, VOG4856, VOG4334, VOG4705, VOG4868 |
| FBFDKBKE_89 | 5519 | 36232 | False | Siphoviridae | VOG0321, VOG4548, VOG0322, VOG6545, VOG4632, VOG4609, VOG0327, VOG0686, VOG6495, VOG1183, VOG7043, VOG3307, VOG0198, VOG3325, VOG0796, VOG10227, VOG0720, VOG4564, VOG4555, VOG1319, VOG4713, VOG0723, VOG5660, VOG0724, VOG0799, VOG0725, VOG0800, VOG4545, VOG4633, VOG6163, VOG6982, VOG4856, VOG4334, VOG4705, VOG4660 |
Phigaro v2.4.0 (Database: Jan. 2024 release)