Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 0 | 2 | 3 | 3.61 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| No hit found | |||||||
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| NENPJPNN_76 | 325 | 1095 | shuV | 0.0 | Shu | Nutritional/Metabolic factor | 99.22 | 100.00 | WP_001626196 |
| NENPJPNN_76 | 325 | 1095 | chuV | 0.0 | Chu | Nutritional/Metabolic factor | 98.83 | 100.00 | WP_000622316 |
| NENPJPNN_11 | 812 | 2380 | ECSMS35_RS25765 | 0.0 | Colicin E1 | Exotoxin | 88.78 | 100.00 | WP_000447001 |
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| NENPJPNN_11 | 812 | 2380 | virulence_ecoli | cea | Colicin E1 | 100.0 | 100.00 | LAUC01000234 |
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| NENPJPNN_117 | 3 | 920 | dcuA | 0.0 | regulatory protein | 100.00 | 70.67 | CAA56259 |
| NENPJPNN_19 | 135428 | 137008 | GroEL | 0.0 | folding of newly synthesized proteins, preventing misfolding and aggregation | 86.91 | 96.70 | BAA04222 |
| NENPJPNN_74 | 285 | 740 | tnpA | 9.30e-106 | regulatory RNA/ transposase for IS200 | 95.39 | 100.00 | AKH06467 |
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| NENPJPNN_10 | 2527 | 2728 | Col8282 | 202 / 207 | 89.60 | DQ995352 |
| NENPJPNN_181 | 1505 | 1635 | ColRNAI | 131 / 130 | 88.55 | DQ298019 |
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| NENPJPNN_1 | 0.0 | 1.0 | 0.0 |
| NENPJPNN_2 | 0.0 | 1.0 | 0.0 |
| NENPJPNN_3 | 1.0 | 0.0 | 1.0 |
| NENPJPNN_4 | 1.0 | 0.0 | 1.0 |
| NENPJPNN_5 | 0.0 | 1.0 | 0.0 |
| NENPJPNN_6 | 0.0 | 1.0 | 0.0 |
| NENPJPNN_7 | 0.0 | 1.0 | 0.0 |
| NENPJPNN_8 | 0.0 | 1.0 | 0.0 |
| NENPJPNN_9 | 0.0 | 1.0 | 0.0 |
| NENPJPNN_10 | 1.0 | 0.0 | 1.0 |
| NENPJPNN_11 | 1.0 | 0.0 | 1.0 |
| NENPJPNN_12 | 0.0 | 1.0 | 0.0 |
| NENPJPNN_13 | 1.0 | 0.0 | 1.0 |
| NENPJPNN_14 | 0.0 | 1.0 | 0.0 |
| NENPJPNN_15 | 0.0 | 1.0 | 0.0 |
| NENPJPNN_16 | 0.0 | 1.0 | 0.0 |
| NENPJPNN_17 | 1.0 | 0.0 | 1.0 |
| NENPJPNN_18 | 1.0 | 0.0 | 1.0 |
| NENPJPNN_19 | 0.0 | 1.0 | 0.0 |
| NENPJPNN_20 | 1.0 | 0.0 | 1.0 |
| NENPJPNN_21 | 0.0 | 1.0 | 0.0 |
| NENPJPNN_22 | 0.0 | 1.0 | 0.0 |
| NENPJPNN_23 | 0.0 | 1.0 | 0.0 |
| NENPJPNN_24 | 0.0 | 1.0 | 0.0 |
| NENPJPNN_25 | 1.0 | 0.0 | 1.0 |
| NENPJPNN_26 | 1.0 | 0.0 | 1.0 |
| NENPJPNN_27 | 1.0 | 0.0 | 1.0 |
| NENPJPNN_28 | 1.0 | 0.0 | 1.0 |
| NENPJPNN_29 | 0.0 | 1.0 | 0.0 |
| NENPJPNN_30 | 1.0 | 0.0 | 1.0 |
| NENPJPNN_31 | 1.0 | 0.0 | 1.0 |
| NENPJPNN_32 | 0.0 | 1.0 | 0.0 |
| NENPJPNN_33 | 0.0 | 1.0 | 0.0 |
| NENPJPNN_34 | 0.0 | 1.0 | 0.0 |
| NENPJPNN_35 | 1.0 | 0.0 | 1.0 |
| NENPJPNN_36 | 0.0 | 1.0 | 0.0 |
| NENPJPNN_37 | 0.0 | 1.0 | 0.0 |
| NENPJPNN_39 | 1.0 | 0.0 | 1.0 |
| NENPJPNN_40 | 0.0 | 1.0 | 0.0 |
| NENPJPNN_41 | 1.0 | 0.0 | 1.0 |
| NENPJPNN_42 | 0.0 | 1.0 | 0.0 |
| NENPJPNN_43 | 1.0 | 0.0 | 1.0 |
| NENPJPNN_44 | 0.0 | 1.0 | 0.0 |
| NENPJPNN_45 | 1.0 | 0.0 | 1.0 |
| NENPJPNN_46 | 0.0 | 1.0 | 0.0 |
| NENPJPNN_47 | 1.0 | 0.0 | 1.0 |
| NENPJPNN_48 | 1.0 | 0.0 | 1.0 |
| NENPJPNN_49 | 0.0 | 1.0 | 0.0 |
| NENPJPNN_50 | 1.0 | 0.0 | 1.0 |
| NENPJPNN_51 | 0.0 | 1.0 | 0.0 |
| NENPJPNN_52 | 0.0 | 1.0 | 0.0 |
| NENPJPNN_53 | 1.0 | 0.0 | 1.0 |
| NENPJPNN_54 | 0.0 | 1.0 | 0.0 |
| NENPJPNN_55 | 1.0 | 0.0 | 1.0 |
| NENPJPNN_56 | 0.0 | 1.0 | 0.0 |
| NENPJPNN_57 | 0.0 | 1.0 | 0.0 |
| NENPJPNN_58 | 0.0 | 1.0 | 0.0 |
| NENPJPNN_59 | 0.0 | 1.0 | 0.0 |
| NENPJPNN_60 | 0.0 | 1.0 | 0.0 |
| NENPJPNN_61 | 1.0 | 0.0 | 1.0 |
| NENPJPNN_62 | 0.0 | 1.0 | 0.0 |
| NENPJPNN_63 | 1.0 | 0.0 | 1.0 |
| NENPJPNN_64 | 0.0 | 1.0 | 0.0 |
| NENPJPNN_65 | 1.0 | 0.0 | 1.0 |
| NENPJPNN_66 | 0.0 | 1.0 | 0.0 |
| NENPJPNN_67 | 1.0 | 0.0 | 1.0 |
| NENPJPNN_68 | 0.0 | 1.0 | 0.0 |
| NENPJPNN_69 | 1.0 | 0.0 | 1.0 |
| NENPJPNN_70 | 1.0 | 0.0 | 1.0 |
| NENPJPNN_71 | 0.0 | 1.0 | 0.0 |
| NENPJPNN_72 | 0.0 | 1.0 | 0.0 |
| NENPJPNN_73 | 1.0 | 0.0 | 1.0 |
| NENPJPNN_74 | 0.0 | 1.0 | 0.0 |
| NENPJPNN_75 | 1.0 | 0.0 | 1.0 |
| NENPJPNN_76 | 0.0 | 1.0 | 0.0 |
| NENPJPNN_77 | 0.0 | 1.0 | 0.0 |
| NENPJPNN_78 | 1.0 | 0.0 | 1.0 |
| NENPJPNN_79 | 0.0 | 1.0 | 0.0 |
| NENPJPNN_80 | 1.0 | 0.0 | 1.0 |
| NENPJPNN_81 | 0.0 | 1.0 | 0.0 |
| NENPJPNN_82 | 0.0 | 1.0 | 0.0 |
| NENPJPNN_83 | 1.0 | 0.0 | 1.0 |
| NENPJPNN_84 | 1.0 | 0.0 | 1.0 |
| NENPJPNN_85 | 1.0 | 0.0 | 1.0 |
| NENPJPNN_86 | 1.0 | 0.0 | 1.0 |
| NENPJPNN_87 | 1.0 | 0.0 | 1.0 |
| NENPJPNN_88 | 1.0 | 0.0 | 1.0 |
| NENPJPNN_89 | 1.0 | 0.0 | 1.0 |
| NENPJPNN_90 | 1.0 | 0.0 | 1.0 |
| NENPJPNN_91 | 0.0 | 1.0 | 0.0 |
| NENPJPNN_93 | 0.0 | 1.0 | 0.0 |
| NENPJPNN_94 | 1.0 | 0.0 | 1.0 |
| NENPJPNN_95 | 1.0 | 0.0 | 1.0 |
| NENPJPNN_96 | 0.0 | 1.0 | 0.0 |
| NENPJPNN_97 | 1.0 | 0.0 | 1.0 |
| NENPJPNN_98 | 0.0 | 1.0 | 0.0 |
| NENPJPNN_99 | 1.0 | 0.0 | 1.0 |
| NENPJPNN_100 | 1.0 | 0.0 | 1.0 |
| NENPJPNN_101 | 0.0 | 1.0 | 0.0 |
| NENPJPNN_102 | 1.0 | 0.0 | 1.0 |
| NENPJPNN_103 | 1.0 | 0.0 | 1.0 |
| NENPJPNN_104 | 0.0 | 1.0 | 0.0 |
| NENPJPNN_105 | 0.0 | 1.0 | 0.0 |
| NENPJPNN_106 | 0.0 | 1.0 | 0.0 |
| NENPJPNN_107 | 0.0 | 1.0 | 0.0 |
| NENPJPNN_109 | 0.0 | 1.0 | 0.0 |
| NENPJPNN_110 | 1.0 | 0.0 | 1.0 |
| NENPJPNN_111 | 1.0 | 0.0 | 1.0 |
| NENPJPNN_112 | 0.0 | 1.0 | 0.0 |
| NENPJPNN_113 | 0.0 | 1.0 | 0.0 |
| NENPJPNN_114 | 0.0 | 1.0 | 0.0 |
| NENPJPNN_115 | 0.0 | 1.0 | 0.0 |
| NENPJPNN_116 | 0.0 | 1.0 | 0.0 |
| NENPJPNN_117 | 0.0 | 1.0 | 0.0 |
| NENPJPNN_118 | 1.0 | 0.0 | 1.0 |
| NENPJPNN_119 | 1.0 | 0.0 | 1.0 |
| NENPJPNN_120 | 1.0 | 0.0 | 1.0 |
| NENPJPNN_121 | 1.0 | 0.0 | 1.0 |
| NENPJPNN_123 | 0.0 | 1.0 | 0.0 |
| NENPJPNN_124 | 1.0 | 0.0 | 1.0 |
| NENPJPNN_125 | 0.0 | 1.0 | 0.0 |
| NENPJPNN_126 | 1.0 | 0.0 | 1.0 |
| NENPJPNN_127 | 1.0 | 0.0 | 1.0 |
| NENPJPNN_128 | 1.0 | 0.0 | 1.0 |
| NENPJPNN_129 | 1.0 | 0.0 | 1.0 |
| NENPJPNN_130 | 1.0 | 0.0 | 1.0 |
| NENPJPNN_131 | 1.0 | 0.0 | 1.0 |
| NENPJPNN_132 | 1.0 | 0.0 | 1.0 |
| NENPJPNN_133 | 0.0 | 1.0 | 0.0 |
| NENPJPNN_134 | 1.0 | 0.0 | 1.0 |
| NENPJPNN_135 | 0.0 | 1.0 | 0.0 |
| NENPJPNN_136 | 0.0 | 1.0 | 0.0 |
| NENPJPNN_137 | 0.0 | 1.0 | 0.0 |
| NENPJPNN_138 | 1.0 | 0.0 | 1.0 |
| NENPJPNN_139 | 1.0 | 0.0 | 1.0 |
| NENPJPNN_140 | 0.0 | 1.0 | 0.0 |
| NENPJPNN_141 | 0.0 | 1.0 | 0.0 |
| NENPJPNN_142 | 0.0 | 1.0 | 0.0 |
| NENPJPNN_143 | 0.0 | 1.0 | 0.0 |
| NENPJPNN_144 | 0.0 | 1.0 | 0.0 |
| NENPJPNN_145 | 0.0 | 1.0 | 0.0 |
| NENPJPNN_146 | 1.0 | 0.0 | 1.0 |
| NENPJPNN_147 | 0.0 | 1.0 | 0.0 |
| NENPJPNN_148 | 1.0 | 0.0 | 1.0 |
| NENPJPNN_149 | 0.0 | 1.0 | 0.0 |
| NENPJPNN_150 | 0.0 | 1.0 | 0.0 |
| NENPJPNN_151 | 0.0 | 1.0 | 0.0 |
| NENPJPNN_152 | 0.0 | 1.0 | 0.0 |
| NENPJPNN_153 | 0.0 | 1.0 | 0.0 |
| NENPJPNN_154 | 0.0 | 1.0 | 0.0 |
| NENPJPNN_155 | 0.0 | 1.0 | 0.0 |
| NENPJPNN_156 | 0.0 | 1.0 | 0.0 |
| NENPJPNN_157 | 0.0 | 1.0 | 0.0 |
| NENPJPNN_158 | 0.0 | 1.0 | 0.0 |
| NENPJPNN_159 | 0.0 | 1.0 | 0.0 |
| NENPJPNN_160 | 0.0 | 1.0 | 0.0 |
| NENPJPNN_161 | 0.0 | 1.0 | 0.0 |
| NENPJPNN_162 | 0.0 | 1.0 | 0.0 |
| NENPJPNN_163 | 0.0 | 1.0 | 0.0 |
| NENPJPNN_164 | 0.0 | 1.0 | 0.0 |
| NENPJPNN_165 | 0.0 | 1.0 | 0.0 |
| NENPJPNN_166 | 0.0 | 1.0 | 0.0 |
| NENPJPNN_167 | 1.0 | 0.0 | 1.0 |
| NENPJPNN_168 | 0.0 | 1.0 | 0.0 |
| NENPJPNN_169 | 1.0 | 0.0 | 1.0 |
| NENPJPNN_170 | 0.0 | 1.0 | 0.0 |
| NENPJPNN_171 | 0.0 | 1.0 | 0.0 |
| NENPJPNN_172 | 1.0 | 0.0 | 1.0 |
| NENPJPNN_173 | 0.0 | 1.0 | 0.0 |
| NENPJPNN_174 | 1.0 | 0.0 | 1.0 |
| NENPJPNN_175 | 0.0 | 1.0 | 0.0 |
| NENPJPNN_176 | 1.0 | 0.0 | 1.0 |
| NENPJPNN_177 | 0.0 | 1.0 | 0.0 |
| NENPJPNN_178 | 0.0 | 1.0 | 0.0 |
| NENPJPNN_179 | 0.0 | 1.0 | 0.0 |
| NENPJPNN_180 | 0.0 | 1.0 | 0.0 |
| NENPJPNN_181 | 1.0 | 0.0 | 1.0 |
| NENPJPNN_182 | 0.0 | 1.0 | 0.0 |
| NENPJPNN_183 | 0.0 | 1.0 | 0.0 |
| NENPJPNN_184 | 0.0 | 1.0 | 0.0 |
| NENPJPNN_185 | 0.0 | 1.0 | 0.0 |
| NENPJPNN_186 | 0.0 | 1.0 | 0.0 |
| NENPJPNN_187 | 0.0 | 1.0 | 0.0 |
| NENPJPNN_188 | 0.0 | 1.0 | 0.0 |
| NENPJPNN_189 | 1.0 | 0.0 | 1.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| No hit found | |||||
Phigaro v2.4.0 (Database: Jan. 2024 release)