Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 3 | 0 | 0 | 3.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| DGDFJKHL_14 | 105307 | 107253 | tet(Q) | ARO:3000191 | tet(Q) | 98.90 | 98.63 | Z21523.1 |
| DGDFJKHL_66 | 101664 | 102629 | CfxA2 | ARO:3003002 | CfxA2 | 100.00 | 100.00 | AF118110.1 |
| DGDFJKHL_74 | 20598 | 21500 | CepA-44 | ARO:3006225 | CepA-44 | 99.33 | 100.00 | NG_050386.1 |
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| DGDFJKHL_66 | 101664 | 102629 | cfxA3 | Ampicillin | 99.90 | 100.00 | AF472622 |
| DGDFJKHL_66 | 101664 | 102629 | cfxA4 | Unknown Beta-lactam | 99.90 | 100.00 | AY769933 |
| DGDFJKHL_66 | 101664 | 102629 | cfxA5 | Unknown Beta-lactam | 99.90 | 100.00 | AY769934 |
| DGDFJKHL_66 | 101664 | 102629 | cfxA | Cefoxitin, Ampicillin | 99.90 | 100.00 | U38243 |
| DGDFJKHL_74 | 20598 | 21500 | cepA-44 | Unknown Beta-lactam | 99.56 | 100.00 | U05885 |
| DGDFJKHL_14 | 105307 | 107219 | tet(Q) | Doxycycline, Tetracycline, Minocycline | 99.32 | 99.33 | Z21523 |
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| DGDFJKHL_66 | 101664 | 102626 | cfxA | CfxA family broad-spectrum class A beta-lactamase | EXACTX | 100.00 | 100.00 | WP_004339683.1 |
| DGDFJKHL_74 | 20598 | 21497 | cepA | CepA family extended-spectrum class A beta-lactamase | BLASTX | 99.33 | 100.00 | WP_032579291.1 |
| DGDFJKHL_14 | 105307 | 107220 | tet(Q) | tetracycline resistance ribosomal protection protein Tet(Q) | BLASTX | 98.90 | 99.53 | WP_002560998.1 |
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| No hit found | ||||||
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| DGDFJKHL_1 | 0.0 | 1.0 | 0.0 |
| DGDFJKHL_2 | 0.0 | 1.0 | 0.0 |
| DGDFJKHL_3 | 0.0 | 1.0 | 0.0 |
| DGDFJKHL_4 | 0.0 | 1.0 | 0.0 |
| DGDFJKHL_5 | 0.0 | 1.0 | 0.0 |
| DGDFJKHL_6 | 0.0 | 1.0 | 0.0 |
| DGDFJKHL_7 | 0.0 | 1.0 | 0.0 |
| DGDFJKHL_8 | 0.0 | 1.0 | 0.0 |
| DGDFJKHL_9 | 0.0 | 1.0 | 0.0 |
| DGDFJKHL_10 | 0.0 | 1.0 | 0.0 |
| DGDFJKHL_11 | 1.0 | 0.0 | 1.0 |
| DGDFJKHL_12 | 0.0 | 1.0 | 0.0 |
| DGDFJKHL_13 | 0.0 | 1.0 | 0.0 |
| DGDFJKHL_14 | 0.0 | 1.0 | 0.0 |
| DGDFJKHL_15 | 1.0 | 0.0 | 1.0 |
| DGDFJKHL_16 | 0.0 | 1.0 | 0.0 |
| DGDFJKHL_17 | 0.0 | 1.0 | 0.0 |
| DGDFJKHL_18 | 0.0 | 1.0 | 0.0 |
| DGDFJKHL_19 | 0.0 | 1.0 | 0.0 |
| DGDFJKHL_20 | 0.0 | 1.0 | 0.0 |
| DGDFJKHL_21 | 0.0 | 1.0 | 0.0 |
| DGDFJKHL_22 | 0.0 | 1.0 | 0.0 |
| DGDFJKHL_23 | 0.0 | 1.0 | 0.0 |
| DGDFJKHL_24 | 0.0 | 1.0 | 0.0 |
| DGDFJKHL_25 | 0.0 | 1.0 | 0.0 |
| DGDFJKHL_26 | 0.0 | 1.0 | 0.0 |
| DGDFJKHL_27 | 0.0 | 1.0 | 0.0 |
| DGDFJKHL_28 | 0.0 | 1.0 | 0.0 |
| DGDFJKHL_29 | 0.0 | 1.0 | 0.0 |
| DGDFJKHL_30 | 1.0 | 0.0 | 1.0 |
| DGDFJKHL_31 | 0.0 | 1.0 | 0.0 |
| DGDFJKHL_32 | 0.0 | 1.0 | 0.0 |
| DGDFJKHL_33 | 0.0 | 1.0 | 0.0 |
| DGDFJKHL_34 | 0.0 | 1.0 | 0.0 |
| DGDFJKHL_35 | 0.0 | 1.0 | 0.0 |
| DGDFJKHL_36 | 0.0 | 1.0 | 0.0 |
| DGDFJKHL_37 | 0.0 | 1.0 | 0.0 |
| DGDFJKHL_38 | 0.0 | 1.0 | 0.0 |
| DGDFJKHL_39 | 0.0 | 1.0 | 0.0 |
| DGDFJKHL_40 | 0.0 | 1.0 | 0.0 |
| DGDFJKHL_41 | 0.0 | 1.0 | 0.0 |
| DGDFJKHL_42 | 0.0 | 1.0 | 0.0 |
| DGDFJKHL_43 | 0.0 | 1.0 | 0.0 |
| DGDFJKHL_44 | 1.0 | 0.0 | 1.0 |
| DGDFJKHL_45 | 0.0 | 1.0 | 0.0 |
| DGDFJKHL_46 | 0.0 | 1.0 | 0.0 |
| DGDFJKHL_47 | 0.0 | 1.0 | 0.0 |
| DGDFJKHL_48 | 0.0 | 1.0 | 0.0 |
| DGDFJKHL_49 | 1.0 | 0.0 | 1.0 |
| DGDFJKHL_50 | 0.0 | 1.0 | 0.0 |
| DGDFJKHL_51 | 1.0 | 0.0 | 1.0 |
| DGDFJKHL_52 | 0.0 | 1.0 | 0.0 |
| DGDFJKHL_53 | 0.0 | 1.0 | 0.0 |
| DGDFJKHL_54 | 0.0 | 1.0 | 0.0 |
| DGDFJKHL_55 | 0.0 | 1.0 | 0.0 |
| DGDFJKHL_56 | 1.0 | 0.0 | 1.0 |
| DGDFJKHL_57 | 0.0 | 1.0 | 0.0 |
| DGDFJKHL_58 | 1.0 | 0.0 | 1.0 |
| DGDFJKHL_59 | 0.0 | 1.0 | 0.0 |
| DGDFJKHL_60 | 0.0 | 1.0 | 0.0 |
| DGDFJKHL_61 | 0.0 | 1.0 | 0.0 |
| DGDFJKHL_62 | 0.0 | 1.0 | 0.0 |
| DGDFJKHL_63 | 0.0 | 1.0 | 0.0 |
| DGDFJKHL_64 | 0.0 | 1.0 | 0.0 |
| DGDFJKHL_65 | 1.0 | 0.0 | 1.0 |
| DGDFJKHL_66 | 0.0 | 1.0 | 0.0 |
| DGDFJKHL_67 | 1.0 | 0.0 | 1.0 |
| DGDFJKHL_68 | 0.0 | 1.0 | 0.0 |
| DGDFJKHL_69 | 1.0 | 0.0 | 1.0 |
| DGDFJKHL_70 | 0.0 | 1.0 | 0.0 |
| DGDFJKHL_71 | 0.0 | 1.0 | 0.0 |
| DGDFJKHL_72 | 1.0 | 0.0 | 1.0 |
| DGDFJKHL_73 | 0.0 | 1.0 | 0.0 |
| DGDFJKHL_74 | 0.0 | 1.0 | 0.0 |
| DGDFJKHL_75 | 0.0 | 1.0 | 0.0 |
| DGDFJKHL_76 | 1.0 | 0.0 | 1.0 |
| DGDFJKHL_77 | 0.0 | 1.0 | 0.0 |
| DGDFJKHL_78 | 0.0 | 1.0 | 0.0 |
| DGDFJKHL_79 | 0.0 | 1.0 | 0.0 |
| DGDFJKHL_80 | 0.0 | 1.0 | 0.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| No hit found | |||||
Phigaro v2.4.0 (Database: Jan. 2024 release)