Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 3 | 1 | 0 | 3.16 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| JGDEKPOK_16 | 23813 | 25018 | Mef(En2) | ARO:3004659 | Mef(En2) | 99.50 | 100.00 | AF251288.1 |
| JGDEKPOK_16 | 1861 | 2763 | cepA | ARO:3003559 | cepA | 99.67 | 100.00 | U05883.1 |
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| JGDEKPOK_16 | 1861 | 2763 | cepA | Unknown Beta-lactam | 99.78 | 100.00 | L13472 |
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| JGDEKPOK_16 | 25043 | 25552 | lnu(AN2) | lincosamide nucleotidyltransferase Lnu(AN2) | EXACTX | 100.00 | 100.00 | WP_004308783.1 |
| JGDEKPOK_16 | 1864 | 2763 | cepA | CepA family extended-spectrum class A beta-lactamase | BLASTX | 99.67 | 100.00 | WP_005795628.1 |
| JGDEKPOK_16 | 23813 | 25015 | mef(En2) | macrolide efflux MFS transporter Mef(En2) | BLASTX | 99.50 | 100.00 | WP_063853729.1 |
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| JGDEKPOK_99 | 1496 | 2689 | bft-1 | 0.0 | BFT B. fragilis toxin, subtype 1 | Exotoxin | 100.00 | 100.00 | BAA77276 |
| JGDEKPOK_99 | 1496 | 2689 | bft-2 | 0.0 | BFT B. fragilis toxin, subtype 2 | Exotoxin | 94.89 | 100.00 | BAA77277 |
| JGDEKPOK_99 | 1496 | 2689 | bft-3 | 0.0 | BFT B. fragilis toxin, subtype 3 | Exotoxin | 94.47 | 100.00 | BAA77275 |
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| No hit found | ||||||
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| JGDEKPOK_1 | 0.0 | 1.0 | 0.0 |
| JGDEKPOK_2 | 0.0 | 1.0 | 0.0 |
| JGDEKPOK_3 | 0.0 | 1.0 | 0.0 |
| JGDEKPOK_4 | 0.0 | 1.0 | 0.0 |
| JGDEKPOK_5 | 0.0 | 1.0 | 0.0 |
| JGDEKPOK_6 | 0.0 | 1.0 | 0.0 |
| JGDEKPOK_7 | 0.0 | 1.0 | 0.0 |
| JGDEKPOK_8 | 0.0 | 1.0 | 0.0 |
| JGDEKPOK_9 | 0.0 | 1.0 | 0.0 |
| JGDEKPOK_10 | 0.0 | 1.0 | 0.0 |
| JGDEKPOK_11 | 0.0 | 1.0 | 0.0 |
| JGDEKPOK_12 | 0.0 | 1.0 | 0.0 |
| JGDEKPOK_13 | 0.0 | 1.0 | 0.0 |
| JGDEKPOK_14 | 0.0 | 1.0 | 0.0 |
| JGDEKPOK_15 | 0.0 | 1.0 | 0.0 |
| JGDEKPOK_16 | 0.0 | 1.0 | 0.0 |
| JGDEKPOK_17 | 0.0 | 1.0 | 0.0 |
| JGDEKPOK_18 | 0.0 | 1.0 | 0.0 |
| JGDEKPOK_19 | 0.0 | 1.0 | 0.0 |
| JGDEKPOK_20 | 0.0 | 1.0 | 0.0 |
| JGDEKPOK_21 | 0.0 | 1.0 | 0.0 |
| JGDEKPOK_22 | 0.0 | 1.0 | 0.0 |
| JGDEKPOK_23 | 0.0 | 1.0 | 0.0 |
| JGDEKPOK_24 | 0.0 | 1.0 | 0.0 |
| JGDEKPOK_25 | 0.0 | 1.0 | 0.0 |
| JGDEKPOK_26 | 0.0 | 1.0 | 0.0 |
| JGDEKPOK_27 | 0.0 | 1.0 | 0.0 |
| JGDEKPOK_28 | 0.0 | 1.0 | 0.0 |
| JGDEKPOK_29 | 0.0 | 1.0 | 0.0 |
| JGDEKPOK_30 | 0.0 | 1.0 | 0.0 |
| JGDEKPOK_31 | 0.0 | 1.0 | 0.0 |
| JGDEKPOK_32 | 0.0 | 1.0 | 0.0 |
| JGDEKPOK_33 | 0.0 | 1.0 | 0.0 |
| JGDEKPOK_34 | 1.0 | 0.0 | 1.0 |
| JGDEKPOK_35 | 1.0 | 0.0 | 1.0 |
| JGDEKPOK_36 | 0.0 | 1.0 | 0.0 |
| JGDEKPOK_37 | 0.0 | 1.0 | 0.0 |
| JGDEKPOK_38 | 0.0 | 1.0 | 0.0 |
| JGDEKPOK_39 | 0.0 | 1.0 | 0.0 |
| JGDEKPOK_40 | 1.0 | 0.0 | 1.0 |
| JGDEKPOK_41 | 0.0 | 1.0 | 0.0 |
| JGDEKPOK_42 | 0.0 | 1.0 | 0.0 |
| JGDEKPOK_43 | 0.0 | 1.0 | 0.0 |
| JGDEKPOK_44 | 0.0 | 1.0 | 0.0 |
| JGDEKPOK_45 | 0.0 | 1.0 | 0.0 |
| JGDEKPOK_46 | 1.0 | 0.0 | 1.0 |
| JGDEKPOK_47 | 1.0 | 0.0 | 1.0 |
| JGDEKPOK_48 | 0.0 | 1.0 | 0.0 |
| JGDEKPOK_49 | 0.0 | 1.0 | 0.0 |
| JGDEKPOK_50 | 0.0 | 1.0 | 0.0 |
| JGDEKPOK_51 | 0.0 | 1.0 | 0.0 |
| JGDEKPOK_52 | 0.0 | 1.0 | 0.0 |
| JGDEKPOK_53 | 0.0 | 1.0 | 0.0 |
| JGDEKPOK_54 | 1.0 | 0.0 | 1.0 |
| JGDEKPOK_55 | 0.0 | 1.0 | 0.0 |
| JGDEKPOK_56 | 0.0 | 1.0 | 0.0 |
| JGDEKPOK_57 | 0.0 | 1.0 | 0.0 |
| JGDEKPOK_58 | 0.0 | 1.0 | 0.0 |
| JGDEKPOK_59 | 0.0 | 1.0 | 0.0 |
| JGDEKPOK_60 | 0.0 | 1.0 | 0.0 |
| JGDEKPOK_61 | 0.0 | 1.0 | 0.0 |
| JGDEKPOK_62 | 1.0 | 0.0 | 1.0 |
| JGDEKPOK_63 | 1.0 | 0.0 | 1.0 |
| JGDEKPOK_64 | 1.0 | 0.0 | 1.0 |
| JGDEKPOK_65 | 0.0 | 1.0 | 0.0 |
| JGDEKPOK_66 | 0.0 | 1.0 | 0.0 |
| JGDEKPOK_67 | 0.0 | 1.0 | 0.0 |
| JGDEKPOK_68 | 1.0 | 0.0 | 1.0 |
| JGDEKPOK_69 | 0.0 | 1.0 | 0.0 |
| JGDEKPOK_70 | 0.0 | 1.0 | 0.0 |
| JGDEKPOK_71 | 0.0 | 1.0 | 0.0 |
| JGDEKPOK_72 | 0.0 | 1.0 | 0.0 |
| JGDEKPOK_73 | 0.0 | 1.0 | 0.0 |
| JGDEKPOK_74 | 0.0 | 1.0 | 0.0 |
| JGDEKPOK_75 | 0.0 | 1.0 | 0.0 |
| JGDEKPOK_76 | 1.0 | 0.0 | 1.0 |
| JGDEKPOK_77 | 1.0 | 0.0 | 1.0 |
| JGDEKPOK_78 | 0.0 | 1.0 | 0.0 |
| JGDEKPOK_79 | 0.0 | 1.0 | 0.0 |
| JGDEKPOK_80 | 1.0 | 0.0 | 1.0 |
| JGDEKPOK_81 | 0.0 | 1.0 | 0.0 |
| JGDEKPOK_82 | 0.0 | 1.0 | 0.0 |
| JGDEKPOK_83 | 1.0 | 0.0 | 1.0 |
| JGDEKPOK_84 | 0.0 | 1.0 | 0.0 |
| JGDEKPOK_85 | 0.0 | 1.0 | 0.0 |
| JGDEKPOK_86 | 0.0 | 1.0 | 0.0 |
| JGDEKPOK_87 | 0.0 | 1.0 | 0.0 |
| JGDEKPOK_88 | 0.0 | 1.0 | 0.0 |
| JGDEKPOK_89 | 0.0 | 1.0 | 0.0 |
| JGDEKPOK_90 | 0.0 | 1.0 | 0.0 |
| JGDEKPOK_91 | 0.0 | 1.0 | 0.0 |
| JGDEKPOK_92 | 1.0 | 0.0 | 1.0 |
| JGDEKPOK_93 | 0.0 | 1.0 | 0.0 |
| JGDEKPOK_94 | 0.0 | 1.0 | 0.0 |
| JGDEKPOK_95 | 0.0 | 1.0 | 0.0 |
| JGDEKPOK_96 | 0.0 | 1.0 | 0.0 |
| JGDEKPOK_97 | 0.0 | 1.0 | 0.0 |
| JGDEKPOK_98 | 0.0 | 1.0 | 0.0 |
| JGDEKPOK_99 | 0.0 | 1.0 | 0.0 |
| JGDEKPOK_100 | 0.0 | 1.0 | 0.0 |
| JGDEKPOK_101 | 0.0 | 1.0 | 0.0 |
| JGDEKPOK_102 | 0.0 | 1.0 | 0.0 |
| JGDEKPOK_103 | 0.0 | 1.0 | 0.0 |
| JGDEKPOK_104 | 0.0 | 1.0 | 0.0 |
| JGDEKPOK_105 | 0.0 | 1.0 | 0.0 |
| JGDEKPOK_106 | 0.0 | 1.0 | 0.0 |
| JGDEKPOK_107 | 1.0 | 0.0 | 1.0 |
| JGDEKPOK_108 | 0.0 | 1.0 | 0.0 |
| JGDEKPOK_109 | 0.0 | 1.0 | 0.0 |
| JGDEKPOK_110 | 1.0 | 0.0 | 1.0 |
| JGDEKPOK_111 | 0.0 | 1.0 | 0.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| No hit found | |||||
Phigaro v2.4.0 (Database: Jan. 2024 release)