Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 2 | 0 | 0 | 2.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| NKPBJDDJ_67 | 317 | 1219 | cepA | ARO:3003559 | cepA | 99.67 | 100.00 | U05883.1 |
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| NKPBJDDJ_67 | 317 | 1219 | cepA-49 | Unknown Beta-lactam | 99.89 | 100.00 | U05886 |
| NKPBJDDJ_79 | 160 | 1110 | cfxA3 | Ampicillin | 86.01 | 98.34 | AF472622 |
| NKPBJDDJ_79 | 160 | 1110 | cfxA4 | Unknown Beta-lactam | 86.01 | 98.34 | AY769933 |
| NKPBJDDJ_79 | 160 | 1110 | cfxA5 | Unknown Beta-lactam | 86.01 | 98.34 | AY769934 |
| NKPBJDDJ_79 | 160 | 1110 | cfxA | Cefoxitin, Ampicillin | 86.01 | 98.34 | U38243 |
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| NKPBJDDJ_67 | 317 | 1216 | cepA | CepA family extended-spectrum class A beta-lactamase | BLASTX | 99.67 | 100.00 | WP_005795628.1 |
| NKPBJDDJ_79 | 159 | 1112 | cfxA | CfxA family broad-spectrum class A beta-lactamase | BLASTX | 83.65 | 99.07 | WP_004339683.1 |
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| No hit found | ||||||
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| NKPBJDDJ_1 | 0.0 | 1.0 | 0.0 |
| NKPBJDDJ_2 | 0.0 | 1.0 | 0.0 |
| NKPBJDDJ_3 | 0.0 | 1.0 | 0.0 |
| NKPBJDDJ_4 | 0.0 | 1.0 | 0.0 |
| NKPBJDDJ_5 | 0.0 | 1.0 | 0.0 |
| NKPBJDDJ_6 | 1.0 | 0.0 | 1.0 |
| NKPBJDDJ_7 | 0.0 | 1.0 | 0.0 |
| NKPBJDDJ_8 | 0.0 | 1.0 | 0.0 |
| NKPBJDDJ_9 | 0.0 | 1.0 | 0.0 |
| NKPBJDDJ_10 | 0.0 | 1.0 | 0.0 |
| NKPBJDDJ_11 | 0.0 | 1.0 | 0.0 |
| NKPBJDDJ_12 | 1.0 | 0.0 | 1.0 |
| NKPBJDDJ_13 | 0.0 | 1.0 | 0.0 |
| NKPBJDDJ_14 | 0.0 | 1.0 | 0.0 |
| NKPBJDDJ_15 | 0.0 | 1.0 | 0.0 |
| NKPBJDDJ_16 | 0.0 | 1.0 | 0.0 |
| NKPBJDDJ_17 | 1.0 | 0.0 | 1.0 |
| NKPBJDDJ_18 | 0.0 | 1.0 | 0.0 |
| NKPBJDDJ_19 | 0.0 | 1.0 | 0.0 |
| NKPBJDDJ_20 | 0.0 | 1.0 | 0.0 |
| NKPBJDDJ_21 | 0.0 | 1.0 | 0.0 |
| NKPBJDDJ_22 | 0.0 | 1.0 | 0.0 |
| NKPBJDDJ_23 | 0.0 | 1.0 | 0.0 |
| NKPBJDDJ_24 | 0.0 | 1.0 | 0.0 |
| NKPBJDDJ_25 | 0.0 | 1.0 | 0.0 |
| NKPBJDDJ_26 | 0.0 | 1.0 | 0.0 |
| NKPBJDDJ_27 | 0.0 | 1.0 | 0.0 |
| NKPBJDDJ_28 | 1.0 | 0.0 | 1.0 |
| NKPBJDDJ_29 | 0.0 | 1.0 | 0.0 |
| NKPBJDDJ_30 | 0.0 | 1.0 | 0.0 |
| NKPBJDDJ_31 | 0.0 | 1.0 | 0.0 |
| NKPBJDDJ_32 | 0.0 | 1.0 | 0.0 |
| NKPBJDDJ_33 | 1.0 | 0.0 | 1.0 |
| NKPBJDDJ_34 | 0.0 | 1.0 | 0.0 |
| NKPBJDDJ_35 | 0.0 | 1.0 | 0.0 |
| NKPBJDDJ_36 | 1.0 | 0.0 | 1.0 |
| NKPBJDDJ_37 | 0.0 | 1.0 | 0.0 |
| NKPBJDDJ_38 | 0.0 | 1.0 | 0.0 |
| NKPBJDDJ_39 | 0.0 | 1.0 | 0.0 |
| NKPBJDDJ_40 | 1.0 | 0.0 | 1.0 |
| NKPBJDDJ_41 | 1.0 | 0.0 | 1.0 |
| NKPBJDDJ_42 | 0.0 | 1.0 | 0.0 |
| NKPBJDDJ_43 | 0.0 | 1.0 | 0.0 |
| NKPBJDDJ_44 | 0.0 | 1.0 | 0.0 |
| NKPBJDDJ_45 | 0.0 | 1.0 | 0.0 |
| NKPBJDDJ_46 | 1.0 | 0.0 | 1.0 |
| NKPBJDDJ_47 | 0.0 | 1.0 | 0.0 |
| NKPBJDDJ_48 | 0.0 | 1.0 | 0.0 |
| NKPBJDDJ_49 | 0.0 | 1.0 | 0.0 |
| NKPBJDDJ_50 | 0.0 | 1.0 | 0.0 |
| NKPBJDDJ_51 | 0.0 | 1.0 | 0.0 |
| NKPBJDDJ_52 | 0.0 | 1.0 | 0.0 |
| NKPBJDDJ_53 | 0.0 | 1.0 | 0.0 |
| NKPBJDDJ_54 | 0.0 | 1.0 | 0.0 |
| NKPBJDDJ_55 | 0.0 | 1.0 | 0.0 |
| NKPBJDDJ_56 | 1.0 | 0.0 | 1.0 |
| NKPBJDDJ_57 | 0.0 | 1.0 | 0.0 |
| NKPBJDDJ_58 | 0.0 | 1.0 | 0.0 |
| NKPBJDDJ_59 | 0.0 | 1.0 | 0.0 |
| NKPBJDDJ_60 | 0.0 | 1.0 | 0.0 |
| NKPBJDDJ_61 | 0.0 | 1.0 | 0.0 |
| NKPBJDDJ_62 | 0.0 | 1.0 | 0.0 |
| NKPBJDDJ_63 | 0.0 | 1.0 | 0.0 |
| NKPBJDDJ_64 | 0.0 | 1.0 | 0.0 |
| NKPBJDDJ_65 | 1.0 | 0.0 | 1.0 |
| NKPBJDDJ_66 | 0.0 | 1.0 | 0.0 |
| NKPBJDDJ_67 | 0.0 | 1.0 | 0.0 |
| NKPBJDDJ_68 | 0.0 | 1.0 | 0.0 |
| NKPBJDDJ_69 | 0.0 | 1.0 | 0.0 |
| NKPBJDDJ_70 | 0.0 | 1.0 | 0.0 |
| NKPBJDDJ_71 | 0.0 | 1.0 | 0.0 |
| NKPBJDDJ_72 | 0.0 | 1.0 | 0.0 |
| NKPBJDDJ_73 | 0.0 | 1.0 | 0.0 |
| NKPBJDDJ_74 | 0.0 | 1.0 | 0.0 |
| NKPBJDDJ_75 | 0.0 | 1.0 | 0.0 |
| NKPBJDDJ_76 | 0.0 | 1.0 | 0.0 |
| NKPBJDDJ_77 | 0.0 | 1.0 | 0.0 |
| NKPBJDDJ_78 | 1.0 | 0.0 | 1.0 |
| NKPBJDDJ_79 | 0.0 | 1.0 | 0.0 |
| NKPBJDDJ_80 | 0.0 | 1.0 | 0.0 |
| NKPBJDDJ_81 | 0.0 | 1.0 | 0.0 |
| NKPBJDDJ_82 | 0.0 | 1.0 | 0.0 |
| NKPBJDDJ_83 | 0.0 | 1.0 | 0.0 |
| NKPBJDDJ_84 | 0.0 | 1.0 | 0.0 |
| NKPBJDDJ_85 | 0.0 | 1.0 | 0.0 |
| NKPBJDDJ_86 | 1.0 | 0.0 | 1.0 |
| NKPBJDDJ_87 | 0.0 | 1.0 | 0.0 |
| NKPBJDDJ_88 | 0.0 | 1.0 | 0.0 |
| NKPBJDDJ_89 | 0.0 | 1.0 | 0.0 |
| NKPBJDDJ_90 | 0.0 | 1.0 | 0.0 |
| NKPBJDDJ_91 | 0.0 | 1.0 | 0.0 |
| NKPBJDDJ_92 | 0.0 | 1.0 | 0.0 |
| NKPBJDDJ_93 | 1.0 | 0.0 | 1.0 |
| NKPBJDDJ_94 | 0.0 | 1.0 | 0.0 |
| NKPBJDDJ_95 | 0.0 | 1.0 | 0.0 |
| NKPBJDDJ_96 | 0.0 | 1.0 | 0.0 |
| NKPBJDDJ_97 | 0.0 | 1.0 | 0.0 |
| NKPBJDDJ_98 | 0.0 | 1.0 | 0.0 |
| NKPBJDDJ_99 | 0.0 | 1.0 | 0.0 |
| NKPBJDDJ_100 | 1.0 | 0.0 | 1.0 |
| NKPBJDDJ_101 | 0.0 | 1.0 | 0.0 |
| NKPBJDDJ_102 | 0.0 | 1.0 | 0.0 |
| NKPBJDDJ_103 | 0.0 | 1.0 | 0.0 |
| NKPBJDDJ_104 | 0.0 | 1.0 | 0.0 |
| NKPBJDDJ_105 | 0.0 | 1.0 | 0.0 |
| NKPBJDDJ_106 | 0.0 | 1.0 | 0.0 |
| NKPBJDDJ_107 | 0.0 | 1.0 | 0.0 |
| NKPBJDDJ_108 | 0.0 | 1.0 | 0.0 |
| NKPBJDDJ_109 | 0.0 | 1.0 | 0.0 |
| NKPBJDDJ_110 | 1.0 | 0.0 | 1.0 |
| NKPBJDDJ_111 | 0.0 | 1.0 | 0.0 |
| NKPBJDDJ_112 | 1.0 | 0.0 | 1.0 |
| NKPBJDDJ_113 | 0.0 | 1.0 | 0.0 |
| NKPBJDDJ_114 | 0.0 | 1.0 | 0.0 |
| NKPBJDDJ_115 | 0.0 | 1.0 | 0.0 |
| NKPBJDDJ_116 | 0.0 | 1.0 | 0.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| NKPBJDDJ_75 | 7361 | 14553 | False | Siphoviridae | VOG4589, |
Phigaro v2.4.0 (Database: Jan. 2024 release)