Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 0 | 0 | 1 | 1.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| No hit found | |||||||
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| LCPDDLMG_119 | 42141 | 43721 | GroEL | 0.0 | folding of newly synthesized proteins, preventing misfolding and aggregation | 80.64 | 96.70 | BAA04222 |
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| No hit found | ||||||
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| LCPDDLMG_1 | 0.0 | 1.0 | 0.0 |
| LCPDDLMG_2 | 1.0 | 0.0 | 1.0 |
| LCPDDLMG_3 | 0.0 | 1.0 | 0.0 |
| LCPDDLMG_4 | 1.0 | 0.0 | 1.0 |
| LCPDDLMG_5 | 0.0 | 1.0 | 0.0 |
| LCPDDLMG_6 | 0.0 | 1.0 | 0.0 |
| LCPDDLMG_7 | 0.0 | 1.0 | 0.0 |
| LCPDDLMG_8 | 1.0 | 0.0 | 1.0 |
| LCPDDLMG_9 | 0.0 | 1.0 | 0.0 |
| LCPDDLMG_10 | 1.0 | 0.0 | 1.0 |
| LCPDDLMG_11 | 0.0 | 1.0 | 0.0 |
| LCPDDLMG_12 | 0.0 | 1.0 | 0.0 |
| LCPDDLMG_13 | 0.0 | 1.0 | 0.0 |
| LCPDDLMG_14 | 0.0 | 1.0 | 0.0 |
| LCPDDLMG_15 | 0.0 | 1.0 | 0.0 |
| LCPDDLMG_16 | 0.0 | 1.0 | 0.0 |
| LCPDDLMG_17 | 0.0 | 1.0 | 0.0 |
| LCPDDLMG_18 | 1.0 | 0.0 | 1.0 |
| LCPDDLMG_19 | 0.0 | 1.0 | 0.0 |
| LCPDDLMG_20 | 1.0 | 0.0 | 1.0 |
| LCPDDLMG_21 | 0.0 | 1.0 | 0.0 |
| LCPDDLMG_22 | 0.0 | 1.0 | 0.0 |
| LCPDDLMG_23 | 0.0 | 1.0 | 0.0 |
| LCPDDLMG_24 | 0.0 | 1.0 | 0.0 |
| LCPDDLMG_25 | 0.0 | 1.0 | 0.0 |
| LCPDDLMG_26 | 1.0 | 0.0 | 1.0 |
| LCPDDLMG_27 | 1.0 | 0.0 | 1.0 |
| LCPDDLMG_28 | 0.0 | 1.0 | 0.0 |
| LCPDDLMG_29 | 0.0 | 1.0 | 0.0 |
| LCPDDLMG_30 | 0.0 | 1.0 | 0.0 |
| LCPDDLMG_31 | 0.0 | 1.0 | 0.0 |
| LCPDDLMG_32 | 1.0 | 0.0 | 1.0 |
| LCPDDLMG_33 | 0.0 | 1.0 | 0.0 |
| LCPDDLMG_34 | 0.0 | 1.0 | 0.0 |
| LCPDDLMG_35 | 1.0 | 0.0 | 1.0 |
| LCPDDLMG_36 | 0.0 | 1.0 | 0.0 |
| LCPDDLMG_37 | 0.0 | 1.0 | 0.0 |
| LCPDDLMG_38 | 1.0 | 0.0 | 1.0 |
| LCPDDLMG_39 | 0.0 | 1.0 | 0.0 |
| LCPDDLMG_40 | 0.0 | 1.0 | 0.0 |
| LCPDDLMG_41 | 0.0 | 1.0 | 0.0 |
| LCPDDLMG_42 | 0.0 | 1.0 | 0.0 |
| LCPDDLMG_43 | 0.0 | 1.0 | 0.0 |
| LCPDDLMG_44 | 0.0 | 1.0 | 0.0 |
| LCPDDLMG_45 | 0.0 | 1.0 | 0.0 |
| LCPDDLMG_46 | 0.0 | 1.0 | 0.0 |
| LCPDDLMG_47 | 0.0 | 1.0 | 0.0 |
| LCPDDLMG_48 | 0.0 | 1.0 | 0.0 |
| LCPDDLMG_49 | 0.0 | 1.0 | 0.0 |
| LCPDDLMG_50 | 0.0 | 1.0 | 0.0 |
| LCPDDLMG_51 | 0.0 | 1.0 | 0.0 |
| LCPDDLMG_52 | 0.0 | 1.0 | 0.0 |
| LCPDDLMG_53 | 0.0 | 1.0 | 0.0 |
| LCPDDLMG_54 | 0.0 | 1.0 | 0.0 |
| LCPDDLMG_55 | 0.0 | 1.0 | 0.0 |
| LCPDDLMG_56 | 1.0 | 0.0 | 1.0 |
| LCPDDLMG_57 | 0.0 | 1.0 | 0.0 |
| LCPDDLMG_58 | 0.0 | 1.0 | 0.0 |
| LCPDDLMG_59 | 0.0 | 1.0 | 0.0 |
| LCPDDLMG_60 | 0.0 | 1.0 | 0.0 |
| LCPDDLMG_61 | 0.0 | 1.0 | 0.0 |
| LCPDDLMG_62 | 0.0 | 1.0 | 0.0 |
| LCPDDLMG_63 | 0.0 | 1.0 | 0.0 |
| LCPDDLMG_64 | 0.0 | 1.0 | 0.0 |
| LCPDDLMG_65 | 0.0 | 1.0 | 0.0 |
| LCPDDLMG_66 | 1.0 | 0.0 | 1.0 |
| LCPDDLMG_67 | 0.0 | 1.0 | 0.0 |
| LCPDDLMG_68 | 1.0 | 0.0 | 1.0 |
| LCPDDLMG_69 | 1.0 | 0.0 | 1.0 |
| LCPDDLMG_70 | 0.0 | 1.0 | 0.0 |
| LCPDDLMG_71 | 0.0 | 1.0 | 0.0 |
| LCPDDLMG_72 | 0.0 | 1.0 | 0.0 |
| LCPDDLMG_73 | 1.0 | 0.0 | 1.0 |
| LCPDDLMG_74 | 1.0 | 0.0 | 1.0 |
| LCPDDLMG_75 | 0.0 | 1.0 | 0.0 |
| LCPDDLMG_76 | 0.0 | 1.0 | 0.0 |
| LCPDDLMG_77 | 0.0 | 1.0 | 0.0 |
| LCPDDLMG_78 | 0.0 | 1.0 | 0.0 |
| LCPDDLMG_79 | 0.0 | 1.0 | 0.0 |
| LCPDDLMG_80 | 0.0 | 1.0 | 0.0 |
| LCPDDLMG_81 | 0.0 | 1.0 | 0.0 |
| LCPDDLMG_82 | 0.0 | 1.0 | 0.0 |
| LCPDDLMG_83 | 0.0 | 1.0 | 0.0 |
| LCPDDLMG_84 | 0.0 | 1.0 | 0.0 |
| LCPDDLMG_85 | 0.0 | 1.0 | 0.0 |
| LCPDDLMG_86 | 0.0 | 1.0 | 0.0 |
| LCPDDLMG_87 | 0.0 | 1.0 | 0.0 |
| LCPDDLMG_88 | 0.0 | 1.0 | 0.0 |
| LCPDDLMG_89 | 0.0 | 1.0 | 0.0 |
| LCPDDLMG_90 | 1.0 | 0.0 | 1.0 |
| LCPDDLMG_91 | 0.0 | 1.0 | 0.0 |
| LCPDDLMG_92 | 0.0 | 1.0 | 0.0 |
| LCPDDLMG_93 | 0.0 | 1.0 | 0.0 |
| LCPDDLMG_94 | 0.0 | 1.0 | 0.0 |
| LCPDDLMG_95 | 0.0 | 1.0 | 0.0 |
| LCPDDLMG_96 | 0.0 | 1.0 | 0.0 |
| LCPDDLMG_97 | 0.0 | 1.0 | 0.0 |
| LCPDDLMG_98 | 1.0 | 0.0 | 1.0 |
| LCPDDLMG_99 | 0.0 | 1.0 | 0.0 |
| LCPDDLMG_100 | 1.0 | 0.0 | 1.0 |
| LCPDDLMG_101 | 1.0 | 0.0 | 1.0 |
| LCPDDLMG_102 | 0.0 | 1.0 | 0.0 |
| LCPDDLMG_103 | 0.0 | 1.0 | 0.0 |
| LCPDDLMG_104 | 0.0 | 1.0 | 0.0 |
| LCPDDLMG_105 | 0.0 | 1.0 | 0.0 |
| LCPDDLMG_106 | 0.0 | 1.0 | 0.0 |
| LCPDDLMG_107 | 0.0 | 1.0 | 0.0 |
| LCPDDLMG_108 | 0.0 | 1.0 | 0.0 |
| LCPDDLMG_109 | 0.0 | 1.0 | 0.0 |
| LCPDDLMG_110 | 0.0 | 1.0 | 0.0 |
| LCPDDLMG_111 | 0.0 | 1.0 | 0.0 |
| LCPDDLMG_112 | 0.0 | 1.0 | 0.0 |
| LCPDDLMG_113 | 0.0 | 1.0 | 0.0 |
| LCPDDLMG_114 | 0.0 | 1.0 | 0.0 |
| LCPDDLMG_115 | 0.0 | 1.0 | 0.0 |
| LCPDDLMG_116 | 0.0 | 1.0 | 0.0 |
| LCPDDLMG_117 | 0.0 | 1.0 | 0.0 |
| LCPDDLMG_118 | 0.0 | 1.0 | 0.0 |
| LCPDDLMG_119 | 0.0 | 1.0 | 0.0 |
| LCPDDLMG_120 | 0.0 | 1.0 | 0.0 |
| LCPDDLMG_121 | 0.0 | 1.0 | 0.0 |
| LCPDDLMG_122 | 0.0 | 1.0 | 0.0 |
| LCPDDLMG_123 | 0.0 | 1.0 | 0.0 |
| LCPDDLMG_124 | 0.0 | 1.0 | 0.0 |
| LCPDDLMG_125 | 0.0 | 1.0 | 0.0 |
| LCPDDLMG_126 | 0.0 | 1.0 | 0.0 |
| LCPDDLMG_127 | 0.0 | 1.0 | 0.0 |
| LCPDDLMG_128 | 1.0 | 0.0 | 1.0 |
| LCPDDLMG_129 | 1.0 | 0.0 | 1.0 |
| LCPDDLMG_130 | 0.0 | 1.0 | 0.0 |
| LCPDDLMG_131 | 0.0 | 1.0 | 0.0 |
| LCPDDLMG_132 | 0.0 | 1.0 | 0.0 |
| LCPDDLMG_133 | 1.0 | 0.0 | 1.0 |
| LCPDDLMG_134 | 0.0 | 1.0 | 0.0 |
| LCPDDLMG_135 | 0.0 | 1.0 | 0.0 |
| LCPDDLMG_136 | 0.0 | 1.0 | 0.0 |
| LCPDDLMG_137 | 1.0 | 0.0 | 1.0 |
| LCPDDLMG_138 | 0.0 | 1.0 | 0.0 |
| LCPDDLMG_139 | 0.0 | 1.0 | 0.0 |
| LCPDDLMG_140 | 0.0 | 1.0 | 0.0 |
| LCPDDLMG_141 | 0.0 | 1.0 | 0.0 |
| LCPDDLMG_142 | 0.0 | 1.0 | 0.0 |
| LCPDDLMG_143 | 0.0 | 1.0 | 0.0 |
| LCPDDLMG_144 | 0.0 | 1.0 | 0.0 |
| LCPDDLMG_145 | 0.0 | 1.0 | 0.0 |
| LCPDDLMG_146 | 0.0 | 1.0 | 0.0 |
| LCPDDLMG_147 | 0.0 | 1.0 | 0.0 |
| LCPDDLMG_148 | 1.0 | 0.0 | 1.0 |
| LCPDDLMG_149 | 0.0 | 1.0 | 0.0 |
| LCPDDLMG_150 | 0.0 | 1.0 | 0.0 |
| LCPDDLMG_151 | 0.0 | 1.0 | 0.0 |
| LCPDDLMG_152 | 0.0 | 1.0 | 0.0 |
| LCPDDLMG_153 | 0.0 | 1.0 | 0.0 |
| LCPDDLMG_154 | 1.0 | 0.0 | 1.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| No hit found | |||||
Phigaro v2.4.0 (Database: Jan. 2024 release)