Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 0 | 0 | 1 | 1.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| No hit found | |||||||
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| OMIMLNGG_2 | 103532 | 101952 | GroEL | 0.0 | folding of newly synthesized proteins, preventing misfolding and aggregation | 86.91 | 96.70 | BAA04222 |
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| No hit found | ||||||
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| OMIMLNGG_1 | 0.0 | 1.0 | 0.0 |
| OMIMLNGG_2 | 0.0 | 1.0 | 0.0 |
| OMIMLNGG_3 | 0.0 | 1.0 | 0.0 |
| OMIMLNGG_4 | 1.0 | 0.0 | 1.0 |
| OMIMLNGG_5 | 1.0 | 0.0 | 1.0 |
| OMIMLNGG_6 | 0.0 | 1.0 | 0.0 |
| OMIMLNGG_7 | 1.0 | 0.0 | 1.0 |
| OMIMLNGG_8 | 1.0 | 0.0 | 1.0 |
| OMIMLNGG_9 | 0.0 | 1.0 | 0.0 |
| OMIMLNGG_10 | 0.0 | 1.0 | 0.0 |
| OMIMLNGG_11 | 1.0 | 0.0 | 1.0 |
| OMIMLNGG_12 | 0.0 | 1.0 | 0.0 |
| OMIMLNGG_13 | 0.0 | 1.0 | 0.0 |
| OMIMLNGG_14 | 1.0 | 0.0 | 1.0 |
| OMIMLNGG_15 | 1.0 | 0.0 | 1.0 |
| OMIMLNGG_16 | 0.0 | 1.0 | 0.0 |
| OMIMLNGG_17 | 0.0 | 1.0 | 0.0 |
| OMIMLNGG_18 | 0.0 | 1.0 | 0.0 |
| OMIMLNGG_19 | 1.0 | 0.0 | 1.0 |
| OMIMLNGG_20 | 0.0 | 1.0 | 0.0 |
| OMIMLNGG_21 | 0.0 | 1.0 | 0.0 |
| OMIMLNGG_22 | 1.0 | 0.0 | 1.0 |
| OMIMLNGG_23 | 0.0 | 1.0 | 0.0 |
| OMIMLNGG_24 | 0.0 | 1.0 | 0.0 |
| OMIMLNGG_25 | 0.0 | 1.0 | 0.0 |
| OMIMLNGG_26 | 1.0 | 0.0 | 1.0 |
| OMIMLNGG_27 | 0.0 | 1.0 | 0.0 |
| OMIMLNGG_28 | 0.0 | 1.0 | 0.0 |
| OMIMLNGG_29 | 1.0 | 0.0 | 1.0 |
| OMIMLNGG_30 | 1.0 | 0.0 | 1.0 |
| OMIMLNGG_31 | 1.0 | 0.0 | 1.0 |
| OMIMLNGG_32 | 1.0 | 0.0 | 1.0 |
| OMIMLNGG_33 | 0.0 | 1.0 | 0.0 |
| OMIMLNGG_34 | 1.0 | 0.0 | 1.0 |
| OMIMLNGG_35 | 0.0 | 1.0 | 0.0 |
| OMIMLNGG_36 | 0.0 | 1.0 | 0.0 |
| OMIMLNGG_37 | 0.0 | 1.0 | 0.0 |
| OMIMLNGG_38 | 0.0 | 1.0 | 0.0 |
| OMIMLNGG_39 | 1.0 | 0.0 | 1.0 |
| OMIMLNGG_40 | 0.0 | 1.0 | 0.0 |
| OMIMLNGG_41 | 0.0 | 1.0 | 0.0 |
| OMIMLNGG_42 | 0.0 | 1.0 | 0.0 |
| OMIMLNGG_43 | 1.0 | 0.0 | 1.0 |
| OMIMLNGG_44 | 0.0 | 1.0 | 0.0 |
| OMIMLNGG_45 | 1.0 | 0.0 | 1.0 |
| OMIMLNGG_46 | 0.0 | 1.0 | 0.0 |
| OMIMLNGG_47 | 1.0 | 0.0 | 1.0 |
| OMIMLNGG_48 | 0.0 | 1.0 | 0.0 |
| OMIMLNGG_49 | 0.0 | 1.0 | 0.0 |
| OMIMLNGG_50 | 0.0 | 1.0 | 0.0 |
| OMIMLNGG_51 | 0.0 | 1.0 | 0.0 |
| OMIMLNGG_52 | 0.0 | 1.0 | 0.0 |
| OMIMLNGG_53 | 0.0 | 1.0 | 0.0 |
| OMIMLNGG_54 | 0.0 | 1.0 | 0.0 |
| OMIMLNGG_55 | 1.0 | 0.0 | 1.0 |
| OMIMLNGG_56 | 0.0 | 1.0 | 0.0 |
| OMIMLNGG_57 | 1.0 | 0.0 | 1.0 |
| OMIMLNGG_58 | 0.0 | 1.0 | 0.0 |
| OMIMLNGG_59 | 1.0 | 0.0 | 1.0 |
| OMIMLNGG_60 | 0.0 | 1.0 | 0.0 |
| OMIMLNGG_61 | 1.0 | 0.0 | 1.0 |
| OMIMLNGG_62 | 0.0 | 1.0 | 0.0 |
| OMIMLNGG_63 | 1.0 | 0.0 | 1.0 |
| OMIMLNGG_64 | 0.0 | 1.0 | 0.0 |
| OMIMLNGG_65 | 0.0 | 1.0 | 0.0 |
| OMIMLNGG_66 | 0.0 | 1.0 | 0.0 |
| OMIMLNGG_67 | 0.0 | 1.0 | 0.0 |
| OMIMLNGG_68 | 0.0 | 1.0 | 0.0 |
| OMIMLNGG_69 | 1.0 | 0.0 | 1.0 |
| OMIMLNGG_70 | 1.0 | 0.0 | 1.0 |
| OMIMLNGG_71 | 0.0 | 1.0 | 0.0 |
| OMIMLNGG_72 | 0.0 | 1.0 | 0.0 |
| OMIMLNGG_73 | 0.0 | 1.0 | 0.0 |
| OMIMLNGG_74 | 0.0 | 1.0 | 0.0 |
| OMIMLNGG_75 | 0.0 | 1.0 | 0.0 |
| OMIMLNGG_76 | 1.0 | 0.0 | 1.0 |
| OMIMLNGG_77 | 0.0 | 1.0 | 0.0 |
| OMIMLNGG_78 | 0.0 | 1.0 | 0.0 |
| OMIMLNGG_79 | 1.0 | 0.0 | 1.0 |
| OMIMLNGG_80 | 0.0 | 1.0 | 0.0 |
| OMIMLNGG_81 | 0.0 | 1.0 | 0.0 |
| OMIMLNGG_82 | 0.0 | 1.0 | 0.0 |
| OMIMLNGG_83 | 0.0 | 1.0 | 0.0 |
| OMIMLNGG_84 | 1.0 | 0.0 | 1.0 |
| OMIMLNGG_85 | 0.0 | 1.0 | 0.0 |
| OMIMLNGG_86 | 1.0 | 0.0 | 1.0 |
| OMIMLNGG_87 | 0.0 | 1.0 | 0.0 |
| OMIMLNGG_88 | 1.0 | 0.0 | 1.0 |
| OMIMLNGG_89 | 0.0 | 1.0 | 0.0 |
| OMIMLNGG_90 | 0.0 | 1.0 | 0.0 |
| OMIMLNGG_91 | 0.0 | 1.0 | 0.0 |
| OMIMLNGG_92 | 0.0 | 1.0 | 0.0 |
| OMIMLNGG_93 | 0.0 | 1.0 | 0.0 |
| OMIMLNGG_94 | 0.0 | 1.0 | 0.0 |
| OMIMLNGG_95 | 0.0 | 1.0 | 0.0 |
| OMIMLNGG_96 | 0.0 | 1.0 | 0.0 |
| OMIMLNGG_97 | 0.0 | 1.0 | 0.0 |
| OMIMLNGG_98 | 0.0 | 1.0 | 0.0 |
| OMIMLNGG_99 | 0.0 | 1.0 | 0.0 |
| OMIMLNGG_100 | 1.0 | 0.0 | 1.0 |
| OMIMLNGG_101 | 0.0 | 1.0 | 0.0 |
| OMIMLNGG_102 | 1.0 | 0.0 | 1.0 |
| OMIMLNGG_103 | 0.0 | 1.0 | 0.0 |
| OMIMLNGG_104 | 1.0 | 0.0 | 1.0 |
| OMIMLNGG_105 | 0.0 | 1.0 | 0.0 |
| OMIMLNGG_106 | 0.0 | 1.0 | 0.0 |
| OMIMLNGG_107 | 0.0 | 1.0 | 0.0 |
| OMIMLNGG_108 | 0.0 | 1.0 | 0.0 |
| OMIMLNGG_109 | 0.0 | 1.0 | 0.0 |
| OMIMLNGG_110 | 0.0 | 1.0 | 0.0 |
| OMIMLNGG_111 | 0.0 | 1.0 | 0.0 |
| OMIMLNGG_112 | 0.0 | 1.0 | 0.0 |
| OMIMLNGG_113 | 0.0 | 1.0 | 0.0 |
| OMIMLNGG_114 | 0.0 | 1.0 | 0.0 |
| OMIMLNGG_115 | 0.0 | 1.0 | 0.0 |
| OMIMLNGG_116 | 0.0 | 1.0 | 0.0 |
| OMIMLNGG_117 | 0.0 | 1.0 | 0.0 |
| OMIMLNGG_118 | 1.0 | 0.0 | 1.0 |
| OMIMLNGG_119 | 0.0 | 1.0 | 0.0 |
| OMIMLNGG_120 | 0.0 | 1.0 | 0.0 |
| OMIMLNGG_121 | 0.0 | 1.0 | 0.0 |
| OMIMLNGG_122 | 0.0 | 1.0 | 0.0 |
| OMIMLNGG_123 | 0.0 | 1.0 | 0.0 |
| OMIMLNGG_124 | 0.0 | 1.0 | 0.0 |
| OMIMLNGG_125 | 0.0 | 1.0 | 0.0 |
| OMIMLNGG_126 | 0.0 | 1.0 | 0.0 |
| OMIMLNGG_127 | 1.0 | 0.0 | 1.0 |
| OMIMLNGG_128 | 1.0 | 0.0 | 1.0 |
| OMIMLNGG_129 | 1.0 | 0.0 | 1.0 |
| OMIMLNGG_130 | 1.0 | 0.0 | 1.0 |
| OMIMLNGG_131 | 0.0 | 1.0 | 0.0 |
| OMIMLNGG_132 | 0.0 | 1.0 | 0.0 |
| OMIMLNGG_133 | 0.0 | 1.0 | 0.0 |
| OMIMLNGG_134 | 0.0 | 1.0 | 0.0 |
| OMIMLNGG_135 | 1.0 | 0.0 | 1.0 |
| OMIMLNGG_136 | 1.0 | 0.0 | 1.0 |
| OMIMLNGG_137 | 1.0 | 0.0 | 1.0 |
| OMIMLNGG_138 | 0.0 | 1.0 | 0.0 |
| OMIMLNGG_139 | 0.0 | 1.0 | 0.0 |
| OMIMLNGG_140 | 1.0 | 0.0 | 1.0 |
| OMIMLNGG_141 | 0.0 | 1.0 | 0.0 |
| OMIMLNGG_142 | 0.0 | 1.0 | 0.0 |
| OMIMLNGG_143 | 0.0 | 1.0 | 0.0 |
| OMIMLNGG_144 | 0.0 | 1.0 | 0.0 |
| OMIMLNGG_145 | 0.0 | 1.0 | 0.0 |
| OMIMLNGG_146 | 0.0 | 1.0 | 0.0 |
| OMIMLNGG_147 | 0.0 | 1.0 | 0.0 |
| OMIMLNGG_148 | 0.0 | 1.0 | 0.0 |
| OMIMLNGG_149 | 0.0 | 1.0 | 0.0 |
| OMIMLNGG_150 | 0.0 | 1.0 | 0.0 |
| OMIMLNGG_151 | 0.0 | 1.0 | 0.0 |
| OMIMLNGG_152 | 1.0 | 0.0 | 1.0 |
| OMIMLNGG_153 | 1.0 | 0.0 | 1.0 |
| OMIMLNGG_154 | 0.0 | 1.0 | 0.0 |
| OMIMLNGG_155 | 1.0 | 0.0 | 1.0 |
| OMIMLNGG_156 | 1.0 | 0.0 | 1.0 |
| OMIMLNGG_157 | 1.0 | 0.0 | 1.0 |
| OMIMLNGG_158 | 0.0 | 1.0 | 0.0 |
| OMIMLNGG_159 | 1.0 | 0.0 | 1.0 |
| OMIMLNGG_160 | 1.0 | 0.0 | 1.0 |
| OMIMLNGG_161 | 1.0 | 0.0 | 1.0 |
| OMIMLNGG_162 | 1.0 | 0.0 | 1.0 |
| OMIMLNGG_163 | 0.0 | 1.0 | 0.0 |
| OMIMLNGG_164 | 1.0 | 0.0 | 1.0 |
| OMIMLNGG_165 | 0.0 | 1.0 | 0.0 |
| OMIMLNGG_166 | 0.0 | 1.0 | 0.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| OMIMLNGG_12 | 30078 | 41994 | True | Siphoviridae | VOG4551, |
| OMIMLNGG_38 | 17567 | 25122 | True | Siphoviridae | VOG6823, |
Phigaro v2.4.0 (Database: Jan. 2024 release)