Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 0 | 0 | 1 | 1.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| No hit found | |||||||
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| ICFHPEEJ_47 | 57234 | 55654 | GroEL | 0.0 | folding of newly synthesized proteins, preventing misfolding and aggregation | 86.91 | 96.70 | BAA04222 |
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| No hit found | ||||||
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| ICFHPEEJ_1 | 0.0 | 1.0 | 0.0 |
| ICFHPEEJ_2 | 0.0 | 1.0 | 0.0 |
| ICFHPEEJ_3 | 0.0 | 1.0 | 0.0 |
| ICFHPEEJ_4 | 1.0 | 0.0 | 1.0 |
| ICFHPEEJ_5 | 0.0 | 1.0 | 0.0 |
| ICFHPEEJ_6 | 0.0 | 1.0 | 0.0 |
| ICFHPEEJ_7 | 0.0 | 1.0 | 0.0 |
| ICFHPEEJ_8 | 1.0 | 0.0 | 1.0 |
| ICFHPEEJ_9 | 0.0 | 1.0 | 0.0 |
| ICFHPEEJ_10 | 0.0 | 1.0 | 0.0 |
| ICFHPEEJ_11 | 0.0 | 1.0 | 0.0 |
| ICFHPEEJ_12 | 1.0 | 0.0 | 1.0 |
| ICFHPEEJ_13 | 1.0 | 0.0 | 1.0 |
| ICFHPEEJ_14 | 0.0 | 1.0 | 0.0 |
| ICFHPEEJ_15 | 0.0 | 1.0 | 0.0 |
| ICFHPEEJ_16 | 1.0 | 0.0 | 1.0 |
| ICFHPEEJ_17 | 0.0 | 1.0 | 0.0 |
| ICFHPEEJ_18 | 0.0 | 1.0 | 0.0 |
| ICFHPEEJ_19 | 0.0 | 1.0 | 0.0 |
| ICFHPEEJ_20 | 0.0 | 1.0 | 0.0 |
| ICFHPEEJ_21 | 0.0 | 1.0 | 0.0 |
| ICFHPEEJ_22 | 0.0 | 1.0 | 0.0 |
| ICFHPEEJ_23 | 1.0 | 0.0 | 1.0 |
| ICFHPEEJ_24 | 0.0 | 1.0 | 0.0 |
| ICFHPEEJ_25 | 0.0 | 1.0 | 0.0 |
| ICFHPEEJ_26 | 1.0 | 0.0 | 1.0 |
| ICFHPEEJ_27 | 1.0 | 0.0 | 1.0 |
| ICFHPEEJ_28 | 0.0 | 1.0 | 0.0 |
| ICFHPEEJ_29 | 0.0 | 1.0 | 0.0 |
| ICFHPEEJ_30 | 0.0 | 1.0 | 0.0 |
| ICFHPEEJ_31 | 0.0 | 1.0 | 0.0 |
| ICFHPEEJ_32 | 0.0 | 1.0 | 0.0 |
| ICFHPEEJ_33 | 1.0 | 0.0 | 1.0 |
| ICFHPEEJ_34 | 0.0 | 1.0 | 0.0 |
| ICFHPEEJ_35 | 0.0 | 1.0 | 0.0 |
| ICFHPEEJ_36 | 0.0 | 1.0 | 0.0 |
| ICFHPEEJ_37 | 0.0 | 1.0 | 0.0 |
| ICFHPEEJ_38 | 0.0 | 1.0 | 0.0 |
| ICFHPEEJ_39 | 0.0 | 1.0 | 0.0 |
| ICFHPEEJ_40 | 0.0 | 1.0 | 0.0 |
| ICFHPEEJ_41 | 0.0 | 1.0 | 0.0 |
| ICFHPEEJ_42 | 0.0 | 1.0 | 0.0 |
| ICFHPEEJ_43 | 0.0 | 1.0 | 0.0 |
| ICFHPEEJ_44 | 0.0 | 1.0 | 0.0 |
| ICFHPEEJ_45 | 0.0 | 1.0 | 0.0 |
| ICFHPEEJ_46 | 0.0 | 1.0 | 0.0 |
| ICFHPEEJ_47 | 0.0 | 1.0 | 0.0 |
| ICFHPEEJ_48 | 0.0 | 1.0 | 0.0 |
| ICFHPEEJ_49 | 1.0 | 0.0 | 1.0 |
| ICFHPEEJ_50 | 0.0 | 1.0 | 0.0 |
| ICFHPEEJ_51 | 0.0 | 1.0 | 0.0 |
| ICFHPEEJ_52 | 1.0 | 0.0 | 1.0 |
| ICFHPEEJ_53 | 1.0 | 0.0 | 1.0 |
| ICFHPEEJ_54 | 0.0 | 1.0 | 0.0 |
| ICFHPEEJ_55 | 1.0 | 0.0 | 1.0 |
| ICFHPEEJ_56 | 0.0 | 1.0 | 0.0 |
| ICFHPEEJ_57 | 0.0 | 1.0 | 0.0 |
| ICFHPEEJ_58 | 0.0 | 1.0 | 0.0 |
| ICFHPEEJ_59 | 1.0 | 0.0 | 1.0 |
| ICFHPEEJ_60 | 0.0 | 1.0 | 0.0 |
| ICFHPEEJ_61 | 0.0 | 1.0 | 0.0 |
| ICFHPEEJ_62 | 0.0 | 1.0 | 0.0 |
| ICFHPEEJ_63 | 0.0 | 1.0 | 0.0 |
| ICFHPEEJ_64 | 0.0 | 1.0 | 0.0 |
| ICFHPEEJ_65 | 0.0 | 1.0 | 0.0 |
| ICFHPEEJ_66 | 0.0 | 1.0 | 0.0 |
| ICFHPEEJ_67 | 0.0 | 1.0 | 0.0 |
| ICFHPEEJ_68 | 0.0 | 1.0 | 0.0 |
| ICFHPEEJ_69 | 1.0 | 0.0 | 1.0 |
| ICFHPEEJ_70 | 1.0 | 0.0 | 1.0 |
| ICFHPEEJ_71 | 0.0 | 1.0 | 0.0 |
| ICFHPEEJ_72 | 1.0 | 0.0 | 1.0 |
| ICFHPEEJ_73 | 1.0 | 0.0 | 1.0 |
| ICFHPEEJ_74 | 0.0 | 1.0 | 0.0 |
| ICFHPEEJ_75 | 0.0 | 1.0 | 0.0 |
| ICFHPEEJ_76 | 0.0 | 1.0 | 0.0 |
| ICFHPEEJ_77 | 0.0 | 1.0 | 0.0 |
| ICFHPEEJ_78 | 1.0 | 0.0 | 1.0 |
| ICFHPEEJ_79 | 0.0 | 1.0 | 0.0 |
| ICFHPEEJ_80 | 0.0 | 1.0 | 0.0 |
| ICFHPEEJ_81 | 1.0 | 0.0 | 1.0 |
| ICFHPEEJ_82 | 0.0 | 1.0 | 0.0 |
| ICFHPEEJ_83 | 0.0 | 1.0 | 0.0 |
| ICFHPEEJ_84 | 0.0 | 1.0 | 0.0 |
| ICFHPEEJ_85 | 0.0 | 1.0 | 0.0 |
| ICFHPEEJ_86 | 0.0 | 1.0 | 0.0 |
| ICFHPEEJ_87 | 0.0 | 1.0 | 0.0 |
| ICFHPEEJ_88 | 1.0 | 0.0 | 1.0 |
| ICFHPEEJ_89 | 1.0 | 0.0 | 1.0 |
| ICFHPEEJ_90 | 0.0 | 1.0 | 0.0 |
| ICFHPEEJ_91 | 1.0 | 0.0 | 1.0 |
| ICFHPEEJ_92 | 0.0 | 1.0 | 0.0 |
| ICFHPEEJ_93 | 0.0 | 1.0 | 0.0 |
| ICFHPEEJ_94 | 1.0 | 0.0 | 1.0 |
| ICFHPEEJ_95 | 0.0 | 1.0 | 0.0 |
| ICFHPEEJ_96 | 0.0 | 1.0 | 0.0 |
| ICFHPEEJ_97 | 0.0 | 1.0 | 0.0 |
| ICFHPEEJ_98 | 1.0 | 0.0 | 1.0 |
| ICFHPEEJ_99 | 0.0 | 1.0 | 0.0 |
| ICFHPEEJ_100 | 1.0 | 0.0 | 1.0 |
| ICFHPEEJ_101 | 1.0 | 0.0 | 1.0 |
| ICFHPEEJ_102 | 1.0 | 0.0 | 1.0 |
| ICFHPEEJ_103 | 1.0 | 0.0 | 1.0 |
| ICFHPEEJ_104 | 0.0 | 1.0 | 0.0 |
| ICFHPEEJ_105 | 0.0 | 1.0 | 0.0 |
| ICFHPEEJ_106 | 0.0 | 1.0 | 0.0 |
| ICFHPEEJ_107 | 0.0 | 1.0 | 0.0 |
| ICFHPEEJ_108 | 0.0 | 1.0 | 0.0 |
| ICFHPEEJ_109 | 0.0 | 1.0 | 0.0 |
| ICFHPEEJ_110 | 0.0 | 1.0 | 0.0 |
| ICFHPEEJ_111 | 0.0 | 1.0 | 0.0 |
| ICFHPEEJ_112 | 0.0 | 1.0 | 0.0 |
| ICFHPEEJ_113 | 0.0 | 1.0 | 0.0 |
| ICFHPEEJ_114 | 0.0 | 1.0 | 0.0 |
| ICFHPEEJ_115 | 0.0 | 1.0 | 0.0 |
| ICFHPEEJ_116 | 1.0 | 0.0 | 1.0 |
| ICFHPEEJ_117 | 0.0 | 1.0 | 0.0 |
| ICFHPEEJ_118 | 0.0 | 1.0 | 0.0 |
| ICFHPEEJ_119 | 0.0 | 1.0 | 0.0 |
| ICFHPEEJ_120 | 1.0 | 0.0 | 1.0 |
| ICFHPEEJ_121 | 0.0 | 1.0 | 0.0 |
| ICFHPEEJ_122 | 0.0 | 1.0 | 0.0 |
| ICFHPEEJ_123 | 0.0 | 1.0 | 0.0 |
| ICFHPEEJ_124 | 0.0 | 1.0 | 0.0 |
| ICFHPEEJ_125 | 0.0 | 1.0 | 0.0 |
| ICFHPEEJ_126 | 0.0 | 1.0 | 0.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| ICFHPEEJ_3 | 14839 | 23640 | False | Unknown | VOG4568, |
| ICFHPEEJ_56 | 62786 | 72892 | False | Siphoviridae | VOG7238, |
Phigaro v2.4.0 (Database: Jan. 2024 release)