Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 0 | 0 | 1 | 1.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| No hit found | |||||||
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| HDLCBJPM_126 | 51805 | 50225 | GroEL | 0.0 | folding of newly synthesized proteins, preventing misfolding and aggregation | 86.91 | 96.70 | BAA04222 |
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| No hit found | ||||||
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| HDLCBJPM_1 | 0.0 | 1.0 | 0.0 |
| HDLCBJPM_2 | 1.0 | 0.0 | 1.0 |
| HDLCBJPM_3 | 0.0 | 1.0 | 0.0 |
| HDLCBJPM_4 | 0.0 | 1.0 | 0.0 |
| HDLCBJPM_5 | 0.0 | 1.0 | 0.0 |
| HDLCBJPM_6 | 0.0 | 1.0 | 0.0 |
| HDLCBJPM_7 | 0.0 | 1.0 | 0.0 |
| HDLCBJPM_8 | 0.0 | 1.0 | 0.0 |
| HDLCBJPM_9 | 0.0 | 1.0 | 0.0 |
| HDLCBJPM_10 | 0.0 | 1.0 | 0.0 |
| HDLCBJPM_11 | 0.0 | 1.0 | 0.0 |
| HDLCBJPM_12 | 0.0 | 1.0 | 0.0 |
| HDLCBJPM_13 | 0.0 | 1.0 | 0.0 |
| HDLCBJPM_14 | 0.0 | 1.0 | 0.0 |
| HDLCBJPM_15 | 0.0 | 1.0 | 0.0 |
| HDLCBJPM_16 | 0.0 | 1.0 | 0.0 |
| HDLCBJPM_17 | 0.0 | 1.0 | 0.0 |
| HDLCBJPM_18 | 1.0 | 0.0 | 1.0 |
| HDLCBJPM_19 | 0.0 | 1.0 | 0.0 |
| HDLCBJPM_20 | 1.0 | 0.0 | 1.0 |
| HDLCBJPM_21 | 0.0 | 1.0 | 0.0 |
| HDLCBJPM_22 | 0.0 | 1.0 | 0.0 |
| HDLCBJPM_23 | 0.0 | 1.0 | 0.0 |
| HDLCBJPM_24 | 1.0 | 0.0 | 1.0 |
| HDLCBJPM_25 | 1.0 | 0.0 | 1.0 |
| HDLCBJPM_26 | 0.0 | 1.0 | 0.0 |
| HDLCBJPM_27 | 1.0 | 0.0 | 1.0 |
| HDLCBJPM_28 | 1.0 | 0.0 | 1.0 |
| HDLCBJPM_29 | 0.0 | 1.0 | 0.0 |
| HDLCBJPM_30 | 0.0 | 1.0 | 0.0 |
| HDLCBJPM_31 | 0.0 | 1.0 | 0.0 |
| HDLCBJPM_32 | 0.0 | 1.0 | 0.0 |
| HDLCBJPM_33 | 0.0 | 1.0 | 0.0 |
| HDLCBJPM_34 | 0.0 | 1.0 | 0.0 |
| HDLCBJPM_35 | 1.0 | 0.0 | 1.0 |
| HDLCBJPM_36 | 1.0 | 0.0 | 1.0 |
| HDLCBJPM_37 | 1.0 | 0.0 | 1.0 |
| HDLCBJPM_38 | 0.0 | 1.0 | 0.0 |
| HDLCBJPM_39 | 0.0 | 1.0 | 0.0 |
| HDLCBJPM_40 | 0.0 | 1.0 | 0.0 |
| HDLCBJPM_41 | 0.0 | 1.0 | 0.0 |
| HDLCBJPM_42 | 1.0 | 0.0 | 1.0 |
| HDLCBJPM_43 | 1.0 | 0.0 | 1.0 |
| HDLCBJPM_44 | 0.0 | 1.0 | 0.0 |
| HDLCBJPM_45 | 1.0 | 0.0 | 1.0 |
| HDLCBJPM_46 | 0.0 | 1.0 | 0.0 |
| HDLCBJPM_47 | 0.0 | 1.0 | 0.0 |
| HDLCBJPM_48 | 0.0 | 1.0 | 0.0 |
| HDLCBJPM_49 | 0.0 | 1.0 | 0.0 |
| HDLCBJPM_50 | 0.0 | 1.0 | 0.0 |
| HDLCBJPM_51 | 0.0 | 1.0 | 0.0 |
| HDLCBJPM_52 | 1.0 | 0.0 | 1.0 |
| HDLCBJPM_53 | 0.0 | 1.0 | 0.0 |
| HDLCBJPM_54 | 0.0 | 1.0 | 0.0 |
| HDLCBJPM_55 | 0.0 | 1.0 | 0.0 |
| HDLCBJPM_56 | 0.0 | 1.0 | 0.0 |
| HDLCBJPM_57 | 1.0 | 0.0 | 1.0 |
| HDLCBJPM_58 | 0.0 | 1.0 | 0.0 |
| HDLCBJPM_59 | 0.0 | 1.0 | 0.0 |
| HDLCBJPM_60 | 0.0 | 1.0 | 0.0 |
| HDLCBJPM_61 | 1.0 | 0.0 | 1.0 |
| HDLCBJPM_62 | 1.0 | 0.0 | 1.0 |
| HDLCBJPM_63 | 1.0 | 0.0 | 1.0 |
| HDLCBJPM_64 | 0.0 | 1.0 | 0.0 |
| HDLCBJPM_65 | 0.0 | 1.0 | 0.0 |
| HDLCBJPM_66 | 0.0 | 1.0 | 0.0 |
| HDLCBJPM_67 | 0.0 | 1.0 | 0.0 |
| HDLCBJPM_68 | 0.0 | 1.0 | 0.0 |
| HDLCBJPM_69 | 0.0 | 1.0 | 0.0 |
| HDLCBJPM_70 | 0.0 | 1.0 | 0.0 |
| HDLCBJPM_71 | 1.0 | 0.0 | 1.0 |
| HDLCBJPM_72 | 0.0 | 1.0 | 0.0 |
| HDLCBJPM_73 | 0.0 | 1.0 | 0.0 |
| HDLCBJPM_74 | 1.0 | 0.0 | 1.0 |
| HDLCBJPM_75 | 1.0 | 0.0 | 1.0 |
| HDLCBJPM_76 | 0.0 | 1.0 | 0.0 |
| HDLCBJPM_77 | 0.0 | 1.0 | 0.0 |
| HDLCBJPM_78 | 0.0 | 1.0 | 0.0 |
| HDLCBJPM_79 | 0.0 | 1.0 | 0.0 |
| HDLCBJPM_80 | 1.0 | 0.0 | 1.0 |
| HDLCBJPM_81 | 1.0 | 0.0 | 1.0 |
| HDLCBJPM_82 | 1.0 | 0.0 | 1.0 |
| HDLCBJPM_83 | 0.0 | 1.0 | 0.0 |
| HDLCBJPM_84 | 0.0 | 1.0 | 0.0 |
| HDLCBJPM_85 | 0.0 | 1.0 | 0.0 |
| HDLCBJPM_86 | 0.0 | 1.0 | 0.0 |
| HDLCBJPM_87 | 1.0 | 0.0 | 1.0 |
| HDLCBJPM_88 | 0.0 | 1.0 | 0.0 |
| HDLCBJPM_89 | 0.0 | 1.0 | 0.0 |
| HDLCBJPM_90 | 1.0 | 0.0 | 1.0 |
| HDLCBJPM_91 | 0.0 | 1.0 | 0.0 |
| HDLCBJPM_92 | 1.0 | 0.0 | 1.0 |
| HDLCBJPM_93 | 0.0 | 1.0 | 0.0 |
| HDLCBJPM_94 | 1.0 | 0.0 | 1.0 |
| HDLCBJPM_95 | 0.0 | 1.0 | 0.0 |
| HDLCBJPM_96 | 1.0 | 0.0 | 1.0 |
| HDLCBJPM_97 | 0.0 | 1.0 | 0.0 |
| HDLCBJPM_98 | 1.0 | 0.0 | 1.0 |
| HDLCBJPM_99 | 0.0 | 1.0 | 0.0 |
| HDLCBJPM_100 | 1.0 | 0.0 | 1.0 |
| HDLCBJPM_101 | 0.0 | 1.0 | 0.0 |
| HDLCBJPM_102 | 0.0 | 1.0 | 0.0 |
| HDLCBJPM_103 | 0.0 | 1.0 | 0.0 |
| HDLCBJPM_104 | 0.0 | 1.0 | 0.0 |
| HDLCBJPM_105 | 1.0 | 0.0 | 1.0 |
| HDLCBJPM_106 | 0.0 | 1.0 | 0.0 |
| HDLCBJPM_107 | 0.0 | 1.0 | 0.0 |
| HDLCBJPM_108 | 0.0 | 1.0 | 0.0 |
| HDLCBJPM_109 | 1.0 | 0.0 | 1.0 |
| HDLCBJPM_110 | 1.0 | 0.0 | 1.0 |
| HDLCBJPM_111 | 0.0 | 1.0 | 0.0 |
| HDLCBJPM_112 | 0.0 | 1.0 | 0.0 |
| HDLCBJPM_113 | 0.0 | 1.0 | 0.0 |
| HDLCBJPM_114 | 0.0 | 1.0 | 0.0 |
| HDLCBJPM_115 | 0.0 | 1.0 | 0.0 |
| HDLCBJPM_116 | 0.0 | 1.0 | 0.0 |
| HDLCBJPM_117 | 0.0 | 1.0 | 0.0 |
| HDLCBJPM_118 | 0.0 | 1.0 | 0.0 |
| HDLCBJPM_119 | 1.0 | 0.0 | 1.0 |
| HDLCBJPM_120 | 1.0 | 0.0 | 1.0 |
| HDLCBJPM_121 | 0.0 | 1.0 | 0.0 |
| HDLCBJPM_122 | 1.0 | 0.0 | 1.0 |
| HDLCBJPM_123 | 1.0 | 0.0 | 1.0 |
| HDLCBJPM_124 | 0.0 | 1.0 | 0.0 |
| HDLCBJPM_125 | 1.0 | 0.0 | 1.0 |
| HDLCBJPM_126 | 0.0 | 1.0 | 0.0 |
| HDLCBJPM_127 | 1.0 | 0.0 | 1.0 |
| HDLCBJPM_128 | 0.0 | 1.0 | 0.0 |
| HDLCBJPM_129 | 0.0 | 1.0 | 0.0 |
| HDLCBJPM_130 | 0.0 | 1.0 | 0.0 |
| HDLCBJPM_131 | 0.0 | 1.0 | 0.0 |
| HDLCBJPM_132 | 0.0 | 1.0 | 0.0 |
| HDLCBJPM_133 | 0.0 | 1.0 | 0.0 |
| HDLCBJPM_134 | 0.0 | 1.0 | 0.0 |
| HDLCBJPM_135 | 0.0 | 1.0 | 0.0 |
| HDLCBJPM_136 | 0.0 | 1.0 | 0.0 |
| HDLCBJPM_137 | 1.0 | 0.0 | 1.0 |
| HDLCBJPM_138 | 0.0 | 1.0 | 0.0 |
| HDLCBJPM_139 | 0.0 | 1.0 | 0.0 |
| HDLCBJPM_140 | 0.0 | 1.0 | 0.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| HDLCBJPM_139 | 16990 | 30643 | False | Siphoviridae | VOG4636, |
Phigaro v2.4.0 (Database: Jan. 2024 release)