Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 1 | 0 | 0 | 1.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| HBPKLCAG_25 | 113828 | 114730 | cepA | ARO:3003559 | cepA | 99.67 | 100.00 | U05883.1 |
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| HBPKLCAG_25 | 113828 | 114730 | cepA-49 | Unknown Beta-lactam | 99.78 | 100.00 | U05886 |
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| HBPKLCAG_25 | 113828 | 114727 | cepA | CepA family extended-spectrum class A beta-lactamase | BLASTX | 99.67 | 100.00 | WP_005795628.1 |
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| No hit found | ||||||
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| HBPKLCAG_1 | 0.0 | 1.0 | 0.0 |
| HBPKLCAG_2 | 0.0 | 1.0 | 0.0 |
| HBPKLCAG_3 | 1.0 | 0.0 | 1.0 |
| HBPKLCAG_4 | 0.0 | 1.0 | 0.0 |
| HBPKLCAG_5 | 0.0 | 1.0 | 0.0 |
| HBPKLCAG_6 | 0.0 | 1.0 | 0.0 |
| HBPKLCAG_7 | 1.0 | 0.0 | 1.0 |
| HBPKLCAG_8 | 0.0 | 1.0 | 0.0 |
| HBPKLCAG_9 | 0.0 | 1.0 | 0.0 |
| HBPKLCAG_10 | 0.0 | 1.0 | 0.0 |
| HBPKLCAG_11 | 0.0 | 1.0 | 0.0 |
| HBPKLCAG_12 | 1.0 | 0.0 | 1.0 |
| HBPKLCAG_13 | 0.0 | 1.0 | 0.0 |
| HBPKLCAG_14 | 0.0 | 1.0 | 0.0 |
| HBPKLCAG_15 | 0.0 | 1.0 | 0.0 |
| HBPKLCAG_16 | 0.0 | 1.0 | 0.0 |
| HBPKLCAG_17 | 0.0 | 1.0 | 0.0 |
| HBPKLCAG_18 | 0.0 | 1.0 | 0.0 |
| HBPKLCAG_19 | 0.0 | 1.0 | 0.0 |
| HBPKLCAG_20 | 0.0 | 1.0 | 0.0 |
| HBPKLCAG_21 | 0.0 | 1.0 | 0.0 |
| HBPKLCAG_22 | 0.0 | 1.0 | 0.0 |
| HBPKLCAG_23 | 0.0 | 1.0 | 0.0 |
| HBPKLCAG_24 | 0.0 | 1.0 | 0.0 |
| HBPKLCAG_25 | 0.0 | 1.0 | 0.0 |
| HBPKLCAG_26 | 0.0 | 1.0 | 0.0 |
| HBPKLCAG_27 | 0.0 | 1.0 | 0.0 |
| HBPKLCAG_28 | 0.0 | 1.0 | 0.0 |
| HBPKLCAG_29 | 0.0 | 1.0 | 0.0 |
| HBPKLCAG_30 | 0.0 | 1.0 | 0.0 |
| HBPKLCAG_31 | 1.0 | 0.0 | 1.0 |
| HBPKLCAG_32 | 0.0 | 1.0 | 0.0 |
| HBPKLCAG_33 | 0.0 | 1.0 | 0.0 |
| HBPKLCAG_34 | 0.0 | 1.0 | 0.0 |
| HBPKLCAG_35 | 0.0 | 1.0 | 0.0 |
| HBPKLCAG_36 | 0.0 | 1.0 | 0.0 |
| HBPKLCAG_37 | 0.0 | 1.0 | 0.0 |
| HBPKLCAG_38 | 0.0 | 1.0 | 0.0 |
| HBPKLCAG_39 | 1.0 | 0.0 | 1.0 |
| HBPKLCAG_40 | 0.0 | 1.0 | 0.0 |
| HBPKLCAG_41 | 0.0 | 1.0 | 0.0 |
| HBPKLCAG_42 | 0.0 | 1.0 | 0.0 |
| HBPKLCAG_43 | 0.0 | 1.0 | 0.0 |
| HBPKLCAG_44 | 0.0 | 1.0 | 0.0 |
| HBPKLCAG_45 | 0.0 | 1.0 | 0.0 |
| HBPKLCAG_46 | 0.0 | 1.0 | 0.0 |
| HBPKLCAG_47 | 0.0 | 1.0 | 0.0 |
| HBPKLCAG_48 | 0.0 | 1.0 | 0.0 |
| HBPKLCAG_49 | 0.0 | 1.0 | 0.0 |
| HBPKLCAG_50 | 0.0 | 1.0 | 0.0 |
| HBPKLCAG_51 | 0.0 | 1.0 | 0.0 |
| HBPKLCAG_52 | 0.0 | 1.0 | 0.0 |
| HBPKLCAG_53 | 0.0 | 1.0 | 0.0 |
| HBPKLCAG_54 | 0.0 | 1.0 | 0.0 |
| HBPKLCAG_55 | 1.0 | 0.0 | 1.0 |
| HBPKLCAG_56 | 0.0 | 1.0 | 0.0 |
| HBPKLCAG_57 | 0.0 | 1.0 | 0.0 |
| HBPKLCAG_58 | 0.0 | 1.0 | 0.0 |
| HBPKLCAG_59 | 0.0 | 1.0 | 0.0 |
| HBPKLCAG_60 | 0.0 | 1.0 | 0.0 |
| HBPKLCAG_61 | 0.0 | 1.0 | 0.0 |
| HBPKLCAG_62 | 0.0 | 1.0 | 0.0 |
| HBPKLCAG_63 | 0.0 | 1.0 | 0.0 |
| HBPKLCAG_64 | 0.0 | 1.0 | 0.0 |
| HBPKLCAG_65 | 0.0 | 1.0 | 0.0 |
| HBPKLCAG_66 | 0.0 | 1.0 | 0.0 |
| HBPKLCAG_67 | 0.0 | 1.0 | 0.0 |
| HBPKLCAG_68 | 0.0 | 1.0 | 0.0 |
| HBPKLCAG_69 | 0.0 | 1.0 | 0.0 |
| HBPKLCAG_70 | 0.0 | 1.0 | 0.0 |
| HBPKLCAG_71 | 0.0 | 1.0 | 0.0 |
| HBPKLCAG_72 | 1.0 | 0.0 | 1.0 |
| HBPKLCAG_73 | 0.0 | 1.0 | 0.0 |
| HBPKLCAG_74 | 0.0 | 1.0 | 0.0 |
| HBPKLCAG_75 | 0.0 | 1.0 | 0.0 |
| HBPKLCAG_76 | 0.0 | 1.0 | 0.0 |
| HBPKLCAG_77 | 0.0 | 1.0 | 0.0 |
| HBPKLCAG_78 | 0.0 | 1.0 | 0.0 |
| HBPKLCAG_79 | 0.0 | 1.0 | 0.0 |
| HBPKLCAG_80 | 1.0 | 0.0 | 1.0 |
| HBPKLCAG_81 | 0.0 | 1.0 | 0.0 |
| HBPKLCAG_82 | 0.0 | 1.0 | 0.0 |
| HBPKLCAG_83 | 0.0 | 1.0 | 0.0 |
| HBPKLCAG_84 | 1.0 | 0.0 | 1.0 |
| HBPKLCAG_85 | 0.0 | 1.0 | 0.0 |
| HBPKLCAG_86 | 0.0 | 1.0 | 0.0 |
| HBPKLCAG_87 | 0.0 | 1.0 | 0.0 |
| HBPKLCAG_88 | 0.0 | 1.0 | 0.0 |
| HBPKLCAG_89 | 0.0 | 1.0 | 0.0 |
| HBPKLCAG_90 | 1.0 | 0.0 | 1.0 |
| HBPKLCAG_91 | 0.0 | 1.0 | 0.0 |
| HBPKLCAG_92 | 0.0 | 1.0 | 0.0 |
| HBPKLCAG_93 | 0.0 | 1.0 | 0.0 |
| HBPKLCAG_94 | 0.0 | 1.0 | 0.0 |
| HBPKLCAG_95 | 0.0 | 1.0 | 0.0 |
| HBPKLCAG_96 | 1.0 | 0.0 | 1.0 |
| HBPKLCAG_97 | 0.0 | 1.0 | 0.0 |
| HBPKLCAG_98 | 0.0 | 1.0 | 0.0 |
| HBPKLCAG_99 | 0.0 | 1.0 | 0.0 |
| HBPKLCAG_100 | 1.0 | 0.0 | 1.0 |
| HBPKLCAG_101 | 0.0 | 1.0 | 0.0 |
| HBPKLCAG_102 | 0.0 | 1.0 | 0.0 |
| HBPKLCAG_103 | 1.0 | 0.0 | 1.0 |
| HBPKLCAG_104 | 0.0 | 1.0 | 0.0 |
| HBPKLCAG_105 | 0.0 | 1.0 | 0.0 |
| HBPKLCAG_106 | 0.0 | 1.0 | 0.0 |
| HBPKLCAG_107 | 0.0 | 1.0 | 0.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| HBPKLCAG_6 | 43149 | 50363 | False | Siphoviridae | VOG4581, |
Phigaro v2.4.0 (Database: Jan. 2024 release)