Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 0 | 0 | 1 | 1.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| No hit found | |||||||
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| LJHAIICF_7 | 12752 | 11172 | GroEL | 0.0 | folding of newly synthesized proteins, preventing misfolding and aggregation | 86.91 | 96.70 | BAA04222 |
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| No hit found | ||||||
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| LJHAIICF_1 | 0.0 | 1.0 | 0.0 |
| LJHAIICF_2 | 0.0 | 1.0 | 0.0 |
| LJHAIICF_3 | 0.0 | 1.0 | 0.0 |
| LJHAIICF_4 | 0.0 | 1.0 | 0.0 |
| LJHAIICF_5 | 0.0 | 1.0 | 0.0 |
| LJHAIICF_6 | 0.0 | 1.0 | 0.0 |
| LJHAIICF_7 | 0.0 | 1.0 | 0.0 |
| LJHAIICF_8 | 0.0 | 1.0 | 0.0 |
| LJHAIICF_9 | 0.0 | 1.0 | 0.0 |
| LJHAIICF_10 | 0.0 | 1.0 | 0.0 |
| LJHAIICF_11 | 0.0 | 1.0 | 0.0 |
| LJHAIICF_12 | 0.0 | 1.0 | 0.0 |
| LJHAIICF_13 | 0.0 | 1.0 | 0.0 |
| LJHAIICF_14 | 0.0 | 1.0 | 0.0 |
| LJHAIICF_15 | 0.0 | 1.0 | 0.0 |
| LJHAIICF_16 | 0.0 | 1.0 | 0.0 |
| LJHAIICF_17 | 0.0 | 1.0 | 0.0 |
| LJHAIICF_18 | 0.0 | 1.0 | 0.0 |
| LJHAIICF_19 | 0.0 | 1.0 | 0.0 |
| LJHAIICF_20 | 0.0 | 1.0 | 0.0 |
| LJHAIICF_21 | 0.0 | 1.0 | 0.0 |
| LJHAIICF_22 | 0.0 | 1.0 | 0.0 |
| LJHAIICF_23 | 0.0 | 1.0 | 0.0 |
| LJHAIICF_24 | 0.0 | 1.0 | 0.0 |
| LJHAIICF_25 | 0.0 | 1.0 | 0.0 |
| LJHAIICF_26 | 0.0 | 1.0 | 0.0 |
| LJHAIICF_27 | 0.0 | 1.0 | 0.0 |
| LJHAIICF_28 | 0.0 | 1.0 | 0.0 |
| LJHAIICF_29 | 0.0 | 1.0 | 0.0 |
| LJHAIICF_30 | 0.0 | 1.0 | 0.0 |
| LJHAIICF_31 | 0.0 | 1.0 | 0.0 |
| LJHAIICF_32 | 0.0 | 1.0 | 0.0 |
| LJHAIICF_33 | 1.0 | 0.0 | 1.0 |
| LJHAIICF_34 | 0.0 | 1.0 | 0.0 |
| LJHAIICF_35 | 1.0 | 0.0 | 1.0 |
| LJHAIICF_36 | 0.0 | 1.0 | 0.0 |
| LJHAIICF_37 | 0.0 | 1.0 | 0.0 |
| LJHAIICF_38 | 0.0 | 1.0 | 0.0 |
| LJHAIICF_39 | 0.0 | 1.0 | 0.0 |
| LJHAIICF_40 | 0.0 | 1.0 | 0.0 |
| LJHAIICF_41 | 0.0 | 1.0 | 0.0 |
| LJHAIICF_42 | 0.0 | 1.0 | 0.0 |
| LJHAIICF_43 | 0.0 | 1.0 | 0.0 |
| LJHAIICF_44 | 0.0 | 1.0 | 0.0 |
| LJHAIICF_45 | 0.0 | 1.0 | 0.0 |
| LJHAIICF_46 | 0.0 | 1.0 | 0.0 |
| LJHAIICF_47 | 0.0 | 1.0 | 0.0 |
| LJHAIICF_48 | 0.0 | 1.0 | 0.0 |
| LJHAIICF_49 | 0.0 | 1.0 | 0.0 |
| LJHAIICF_50 | 0.0 | 1.0 | 0.0 |
| LJHAIICF_51 | 0.0 | 1.0 | 0.0 |
| LJHAIICF_52 | 0.0 | 1.0 | 0.0 |
| LJHAIICF_53 | 0.0 | 1.0 | 0.0 |
| LJHAIICF_54 | 0.0 | 1.0 | 0.0 |
| LJHAIICF_55 | 1.0 | 0.0 | 1.0 |
| LJHAIICF_56 | 1.0 | 0.0 | 1.0 |
| LJHAIICF_57 | 0.0 | 1.0 | 0.0 |
| LJHAIICF_58 | 0.0 | 1.0 | 0.0 |
| LJHAIICF_59 | 0.0 | 1.0 | 0.0 |
| LJHAIICF_60 | 0.0 | 1.0 | 0.0 |
| LJHAIICF_61 | 0.0 | 1.0 | 0.0 |
| LJHAIICF_62 | 0.0 | 1.0 | 0.0 |
| LJHAIICF_63 | 0.0 | 1.0 | 0.0 |
| LJHAIICF_64 | 0.0 | 1.0 | 0.0 |
| LJHAIICF_65 | 0.0 | 1.0 | 0.0 |
| LJHAIICF_66 | 1.0 | 0.0 | 1.0 |
| LJHAIICF_67 | 0.0 | 1.0 | 0.0 |
| LJHAIICF_68 | 0.0 | 1.0 | 0.0 |
| LJHAIICF_69 | 1.0 | 0.0 | 1.0 |
| LJHAIICF_70 | 0.0 | 1.0 | 0.0 |
| LJHAIICF_71 | 0.0 | 1.0 | 0.0 |
| LJHAIICF_72 | 0.0 | 1.0 | 0.0 |
| LJHAIICF_73 | 0.0 | 1.0 | 0.0 |
| LJHAIICF_74 | 0.0 | 1.0 | 0.0 |
| LJHAIICF_75 | 1.0 | 0.0 | 1.0 |
| LJHAIICF_76 | 0.0 | 1.0 | 0.0 |
| LJHAIICF_77 | 0.0 | 1.0 | 0.0 |
| LJHAIICF_78 | 0.0 | 1.0 | 0.0 |
| LJHAIICF_79 | 1.0 | 0.0 | 1.0 |
| LJHAIICF_80 | 0.0 | 1.0 | 0.0 |
| LJHAIICF_81 | 0.0 | 1.0 | 0.0 |
| LJHAIICF_82 | 0.0 | 1.0 | 0.0 |
| LJHAIICF_83 | 0.0 | 1.0 | 0.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| LJHAIICF_5 | 16222 | 22753 | False | Unknown | VOG8163, |
Phigaro v2.4.0 (Database: Jan. 2024 release)