Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 0 | 0 | 2 | 2.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| No hit found | |||||||
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| JJNHNJLO_6 | 53282 | 53986 | WalR | 1.64e-112 | transcriptional regulatory protein | 83.40 | 100.00 | EPH95667 |
| JJNHNJLO_14 | 48972 | 49169 | CspR | 3.91e-33 | cold shock protein | 87.88 | 100.00 | AAO82613 |
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| No hit found | ||||||
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| JJNHNJLO_1 | 0.0 | 1.0 | 0.0 |
| JJNHNJLO_2 | 0.0 | 1.0 | 0.0 |
| JJNHNJLO_3 | 0.0 | 1.0 | 0.0 |
| JJNHNJLO_4 | 0.0 | 1.0 | 0.0 |
| JJNHNJLO_5 | 0.0 | 1.0 | 0.0 |
| JJNHNJLO_6 | 0.0 | 1.0 | 0.0 |
| JJNHNJLO_7 | 0.0 | 1.0 | 0.0 |
| JJNHNJLO_8 | 0.0 | 1.0 | 0.0 |
| JJNHNJLO_9 | 0.0 | 1.0 | 0.0 |
| JJNHNJLO_10 | 0.0 | 1.0 | 0.0 |
| JJNHNJLO_11 | 0.0 | 1.0 | 0.0 |
| JJNHNJLO_12 | 0.0 | 1.0 | 0.0 |
| JJNHNJLO_13 | 0.0 | 1.0 | 0.0 |
| JJNHNJLO_14 | 0.0 | 1.0 | 0.0 |
| JJNHNJLO_15 | 0.0 | 1.0 | 0.0 |
| JJNHNJLO_16 | 0.0 | 1.0 | 0.0 |
| JJNHNJLO_17 | 0.0 | 1.0 | 0.0 |
| JJNHNJLO_18 | 0.0 | 1.0 | 0.0 |
| JJNHNJLO_19 | 0.0 | 1.0 | 0.0 |
| JJNHNJLO_20 | 0.0 | 1.0 | 0.0 |
| JJNHNJLO_21 | 0.0 | 1.0 | 0.0 |
| JJNHNJLO_22 | 0.0 | 1.0 | 0.0 |
| JJNHNJLO_23 | 0.0 | 1.0 | 0.0 |
| JJNHNJLO_24 | 0.0 | 1.0 | 0.0 |
| JJNHNJLO_25 | 0.0 | 1.0 | 0.0 |
| JJNHNJLO_26 | 0.0 | 1.0 | 0.0 |
| JJNHNJLO_27 | 0.0 | 1.0 | 0.0 |
| JJNHNJLO_28 | 0.0 | 1.0 | 0.0 |
| JJNHNJLO_29 | 0.0 | 1.0 | 0.0 |
| JJNHNJLO_30 | 0.0 | 1.0 | 0.0 |
| JJNHNJLO_31 | 0.0 | 1.0 | 0.0 |
| JJNHNJLO_32 | 0.0 | 1.0 | 0.0 |
| JJNHNJLO_33 | 0.0 | 1.0 | 0.0 |
| JJNHNJLO_34 | 0.0 | 1.0 | 0.0 |
| JJNHNJLO_35 | 0.0 | 1.0 | 0.0 |
| JJNHNJLO_36 | 0.0 | 1.0 | 0.0 |
| JJNHNJLO_37 | 0.0 | 1.0 | 0.0 |
| JJNHNJLO_38 | 0.0 | 1.0 | 0.0 |
| JJNHNJLO_39 | 0.0 | 1.0 | 0.0 |
| JJNHNJLO_40 | 0.0 | 1.0 | 0.0 |
| JJNHNJLO_41 | 0.0 | 1.0 | 0.0 |
| JJNHNJLO_42 | 0.0 | 1.0 | 0.0 |
| JJNHNJLO_43 | 0.0 | 1.0 | 0.0 |
| JJNHNJLO_44 | 0.0 | 1.0 | 0.0 |
| JJNHNJLO_45 | 0.0 | 1.0 | 0.0 |
| JJNHNJLO_46 | 0.0 | 1.0 | 0.0 |
| JJNHNJLO_47 | 0.0 | 1.0 | 0.0 |
| JJNHNJLO_48 | 0.0 | 1.0 | 0.0 |
| JJNHNJLO_49 | 1.0 | 0.0 | 1.0 |
| JJNHNJLO_50 | 1.0 | 0.0 | 1.0 |
| JJNHNJLO_51 | 1.0 | 0.0 | 1.0 |
| JJNHNJLO_52 | 0.0 | 1.0 | 0.0 |
| JJNHNJLO_54 | 1.0 | 0.0 | 1.0 |
| JJNHNJLO_55 | 1.0 | 0.0 | 1.0 |
| JJNHNJLO_56 | 1.0 | 0.0 | 1.0 |
| JJNHNJLO_57 | 1.0 | 0.0 | 1.0 |
| JJNHNJLO_59 | 1.0 | 0.0 | 1.0 |
| JJNHNJLO_60 | 0.0 | 1.0 | 0.0 |
| JJNHNJLO_61 | 1.0 | 0.0 | 1.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| JJNHNJLO_12 | 1607 | 42752 | False | Siphoviridae | VOG6914, VOG7581, VOG6463, VOG4552, VOG0181, VOG10867, VOG4967, VOG3642, VOG0321, VOG0283, VOG0514, VOG10904, VOG0226, VOG4799, VOG0025, VOG7735, VOG7018, VOG9860, VOG0536, VOG4571, VOG0152, VOG3307, VOG3643, VOG0044, VOG0198, VOG7136, VOG4570, VOG10904, VOG4549, VOG1345, VOG4841, VOG4581, VOG4544, VOG3644, VOG4556, VOG4568, VOG4553, VOG5601, VOG0204, VOG4589, VOG0539, VOG0704, VOG4586, VOG2225, VOG6163, VOG4605, VOG4599, VOG6455, VOG7896, VOG1637, VOG0703, VOG4918, VOG3412 |
Phigaro v2.4.0 (Database: Jan. 2024 release)