Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 0 | 0 | 2 | 2.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| No hit found | |||||||
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| INFFCHBL_308 | 27092 | 26388 | WalR | 1.72e-115 | transcriptional regulatory protein | 84.25 | 100.00 | EPH95667 |
| INFFCHBL_288 | 13976 | 13782 | CspR | 9.21e-31 | cold shock protein | 84.61 | 98.48 | AAO82613 |
| INFFCHBL_288 | 13976 | 13779 | CspA | 1.41e-30 | cold shock protein | 84.85 | 100.00 | CAA62903 |
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| No hit found | ||||||
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| INFFCHBL_1 | 0.0 | 1.0 | 0.0 |
| INFFCHBL_2 | 0.0 | 1.0 | 0.0 |
| INFFCHBL_4 | 1.0 | 0.0 | 1.0 |
| INFFCHBL_6 | 0.0 | 1.0 | 0.0 |
| INFFCHBL_7 | 1.0 | 0.0 | 1.0 |
| INFFCHBL_8 | 1.0 | 0.0 | 1.0 |
| INFFCHBL_10 | 1.0 | 0.0 | 1.0 |
| INFFCHBL_11 | 1.0 | 0.0 | 1.0 |
| INFFCHBL_12 | 1.0 | 0.0 | 1.0 |
| INFFCHBL_13 | 0.0 | 1.0 | 0.0 |
| INFFCHBL_15 | 1.0 | 0.0 | 1.0 |
| INFFCHBL_17 | 1.0 | 0.0 | 1.0 |
| INFFCHBL_18 | 1.0 | 0.0 | 1.0 |
| INFFCHBL_22 | 1.0 | 0.0 | 1.0 |
| INFFCHBL_23 | 1.0 | 0.0 | 1.0 |
| INFFCHBL_25 | 1.0 | 0.0 | 1.0 |
| INFFCHBL_26 | 1.0 | 0.0 | 1.0 |
| INFFCHBL_28 | 0.0 | 1.0 | 0.0 |
| INFFCHBL_29 | 1.0 | 0.0 | 1.0 |
| INFFCHBL_30 | 1.0 | 0.0 | 1.0 |
| INFFCHBL_32 | 1.0 | 0.0 | 1.0 |
| INFFCHBL_34 | 1.0 | 0.0 | 1.0 |
| INFFCHBL_35 | 0.0 | 1.0 | 0.0 |
| INFFCHBL_36 | 0.0 | 1.0 | 0.0 |
| INFFCHBL_38 | 1.0 | 0.0 | 1.0 |
| INFFCHBL_39 | 0.0 | 1.0 | 0.0 |
| INFFCHBL_40 | 1.0 | 0.0 | 1.0 |
| INFFCHBL_41 | 1.0 | 0.0 | 1.0 |
| INFFCHBL_43 | 1.0 | 0.0 | 1.0 |
| INFFCHBL_44 | 1.0 | 0.0 | 1.0 |
| INFFCHBL_46 | 0.0 | 1.0 | 0.0 |
| INFFCHBL_48 | 1.0 | 0.0 | 1.0 |
| INFFCHBL_49 | 1.0 | 0.0 | 1.0 |
| INFFCHBL_50 | 1.0 | 0.0 | 1.0 |
| INFFCHBL_52 | 1.0 | 0.0 | 1.0 |
| INFFCHBL_53 | 1.0 | 0.0 | 1.0 |
| INFFCHBL_54 | 1.0 | 0.0 | 1.0 |
| INFFCHBL_55 | 1.0 | 0.0 | 1.0 |
| INFFCHBL_56 | 1.0 | 0.0 | 1.0 |
| INFFCHBL_57 | 0.0 | 1.0 | 0.0 |
| INFFCHBL_58 | 1.0 | 0.0 | 1.0 |
| INFFCHBL_59 | 1.0 | 0.0 | 1.0 |
| INFFCHBL_61 | 1.0 | 0.0 | 1.0 |
| INFFCHBL_62 | 1.0 | 0.0 | 1.0 |
| INFFCHBL_64 | 1.0 | 0.0 | 1.0 |
| INFFCHBL_67 | 1.0 | 0.0 | 1.0 |
| INFFCHBL_68 | 0.0 | 1.0 | 0.0 |
| INFFCHBL_69 | 1.0 | 0.0 | 1.0 |
| INFFCHBL_71 | 1.0 | 0.0 | 1.0 |
| INFFCHBL_72 | 1.0 | 0.0 | 1.0 |
| INFFCHBL_73 | 0.0 | 1.0 | 0.0 |
| INFFCHBL_74 | 1.0 | 0.0 | 1.0 |
| INFFCHBL_75 | 1.0 | 0.0 | 1.0 |
| INFFCHBL_77 | 1.0 | 0.0 | 1.0 |
| INFFCHBL_79 | 0.0 | 1.0 | 0.0 |
| INFFCHBL_80 | 1.0 | 0.0 | 1.0 |
| INFFCHBL_82 | 1.0 | 0.0 | 1.0 |
| INFFCHBL_83 | 1.0 | 0.0 | 1.0 |
| INFFCHBL_84 | 1.0 | 0.0 | 1.0 |
| INFFCHBL_86 | 1.0 | 0.0 | 1.0 |
| INFFCHBL_88 | 1.0 | 0.0 | 1.0 |
| INFFCHBL_89 | 1.0 | 0.0 | 1.0 |
| INFFCHBL_90 | 0.0 | 1.0 | 0.0 |
| INFFCHBL_92 | 1.0 | 0.0 | 1.0 |
| INFFCHBL_95 | 1.0 | 0.0 | 1.0 |
| INFFCHBL_96 | 1.0 | 0.0 | 1.0 |
| INFFCHBL_98 | 1.0 | 0.0 | 1.0 |
| INFFCHBL_99 | 1.0 | 0.0 | 1.0 |
| INFFCHBL_100 | 1.0 | 0.0 | 1.0 |
| INFFCHBL_109 | 1.0 | 0.0 | 1.0 |
| INFFCHBL_110 | 1.0 | 0.0 | 1.0 |
| INFFCHBL_112 | 0.0 | 1.0 | 0.0 |
| INFFCHBL_114 | 1.0 | 0.0 | 1.0 |
| INFFCHBL_119 | 1.0 | 0.0 | 1.0 |
| INFFCHBL_120 | 1.0 | 0.0 | 1.0 |
| INFFCHBL_121 | 1.0 | 0.0 | 1.0 |
| INFFCHBL_124 | 0.0 | 1.0 | 0.0 |
| INFFCHBL_126 | 1.0 | 0.0 | 1.0 |
| INFFCHBL_127 | 1.0 | 0.0 | 1.0 |
| INFFCHBL_133 | 1.0 | 0.0 | 1.0 |
| INFFCHBL_135 | 0.0 | 1.0 | 0.0 |
| INFFCHBL_137 | 1.0 | 0.0 | 1.0 |
| INFFCHBL_146 | 0.0 | 1.0 | 0.0 |
| INFFCHBL_157 | 0.0 | 1.0 | 0.0 |
| INFFCHBL_168 | 0.0 | 1.0 | 0.0 |
| INFFCHBL_179 | 0.0 | 1.0 | 0.0 |
| INFFCHBL_190 | 0.0 | 1.0 | 0.0 |
| INFFCHBL_201 | 0.0 | 1.0 | 0.0 |
| INFFCHBL_212 | 0.0 | 1.0 | 0.0 |
| INFFCHBL_223 | 0.0 | 1.0 | 0.0 |
| INFFCHBL_224 | 0.0 | 1.0 | 0.0 |
| INFFCHBL_235 | 0.0 | 1.0 | 0.0 |
| INFFCHBL_246 | 0.0 | 1.0 | 0.0 |
| INFFCHBL_257 | 0.0 | 1.0 | 0.0 |
| INFFCHBL_268 | 0.0 | 1.0 | 0.0 |
| INFFCHBL_279 | 0.0 | 1.0 | 0.0 |
| INFFCHBL_285 | 0.0 | 1.0 | 0.0 |
| INFFCHBL_286 | 0.0 | 1.0 | 0.0 |
| INFFCHBL_287 | 0.0 | 1.0 | 0.0 |
| INFFCHBL_288 | 0.0 | 1.0 | 0.0 |
| INFFCHBL_289 | 0.0 | 1.0 | 0.0 |
| INFFCHBL_291 | 0.0 | 1.0 | 0.0 |
| INFFCHBL_292 | 0.0 | 1.0 | 0.0 |
| INFFCHBL_293 | 0.0 | 1.0 | 0.0 |
| INFFCHBL_294 | 0.0 | 1.0 | 0.0 |
| INFFCHBL_295 | 0.0 | 1.0 | 0.0 |
| INFFCHBL_297 | 0.0 | 1.0 | 0.0 |
| INFFCHBL_298 | 0.0 | 1.0 | 0.0 |
| INFFCHBL_299 | 0.0 | 1.0 | 0.0 |
| INFFCHBL_300 | 0.0 | 1.0 | 0.0 |
| INFFCHBL_301 | 0.0 | 1.0 | 0.0 |
| INFFCHBL_302 | 0.0 | 1.0 | 0.0 |
| INFFCHBL_303 | 0.0 | 1.0 | 0.0 |
| INFFCHBL_304 | 0.0 | 1.0 | 0.0 |
| INFFCHBL_305 | 0.0 | 1.0 | 0.0 |
| INFFCHBL_306 | 0.0 | 1.0 | 0.0 |
| INFFCHBL_307 | 0.0 | 1.0 | 0.0 |
| INFFCHBL_308 | 0.0 | 1.0 | 0.0 |
| INFFCHBL_310 | 0.0 | 1.0 | 0.0 |
| INFFCHBL_311 | 0.0 | 1.0 | 0.0 |
| INFFCHBL_312 | 0.0 | 1.0 | 0.0 |
| INFFCHBL_313 | 0.0 | 1.0 | 0.0 |
| INFFCHBL_314 | 0.0 | 1.0 | 0.0 |
| INFFCHBL_316 | 0.0 | 1.0 | 0.0 |
| INFFCHBL_318 | 0.0 | 1.0 | 0.0 |
| INFFCHBL_319 | 0.0 | 1.0 | 0.0 |
| INFFCHBL_320 | 0.0 | 1.0 | 0.0 |
| INFFCHBL_321 | 0.0 | 1.0 | 0.0 |
| INFFCHBL_322 | 0.0 | 1.0 | 0.0 |
| INFFCHBL_323 | 1.0 | 0.0 | 1.0 |
| INFFCHBL_324 | 1.0 | 0.0 | 1.0 |
| INFFCHBL_325 | 0.0 | 1.0 | 0.0 |
| INFFCHBL_326 | 1.0 | 0.0 | 1.0 |
| INFFCHBL_328 | 0.0 | 1.0 | 0.0 |
| INFFCHBL_329 | 1.0 | 0.0 | 1.0 |
| INFFCHBL_330 | 1.0 | 0.0 | 1.0 |
| INFFCHBL_331 | 0.0 | 1.0 | 0.0 |
| INFFCHBL_332 | 0.0 | 1.0 | 0.0 |
| INFFCHBL_333 | 0.0 | 1.0 | 0.0 |
| INFFCHBL_334 | 0.0 | 1.0 | 0.0 |
| INFFCHBL_335 | 0.0 | 1.0 | 0.0 |
| INFFCHBL_336 | 0.0 | 1.0 | 0.0 |
| INFFCHBL_337 | 0.0 | 1.0 | 0.0 |
| INFFCHBL_338 | 1.0 | 0.0 | 1.0 |
| INFFCHBL_339 | 1.0 | 0.0 | 1.0 |
| INFFCHBL_341 | 0.0 | 1.0 | 0.0 |
| INFFCHBL_342 | 1.0 | 0.0 | 1.0 |
| INFFCHBL_343 | 0.0 | 1.0 | 0.0 |
| INFFCHBL_344 | 1.0 | 0.0 | 1.0 |
| INFFCHBL_345 | 1.0 | 0.0 | 1.0 |
| INFFCHBL_346 | 1.0 | 0.0 | 1.0 |
| INFFCHBL_347 | 1.0 | 0.0 | 1.0 |
| INFFCHBL_349 | 1.0 | 0.0 | 1.0 |
| INFFCHBL_352 | 0.0 | 1.0 | 0.0 |
| INFFCHBL_353 | 0.0 | 1.0 | 0.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| INFFCHBL_343 | 26601 | 54426 | False | Siphoviridae | VOG4693, VOG0198, VOG4841, VOG4581, VOG1886, VOG6939, VOG4556, VOG4568, VOG4553, VOG0205, VOG8239, VOG0207, VOG4586, VOG0209, VOG0660, VOG6163, VOG4605, VOG4599, VOG1926, VOG5334, VOG4705, VOG4615, VOG1637, VOG0054, VOG1521 |
Phigaro v2.4.0 (Database: Jan. 2024 release)