Probiotic potential risk score


ARGs VFs PGs PPRS
6006.00

PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).

Antibiotic resistance genes


Comprehensive Antibiotic Resistance Database (CARD)

Query ID Begin End ARO name ARO accession CARD name Identity Coverage Accession no.
BKKJCBLI_227368774892Mef(En2)ARO:3004659Mef(En2)99.25100.00AF251288.1
BKKJCBLI_225173452636cepAARO:3003559cepA100.00100.00U05883.1
BKKJCBLI_102775629681tet(Q)ARO:3000191tet(Q)97.1997.56Z21523.1
BKKJCBLI_1132384038ErmFARO:3000498ErmF99.25100.00M17124.1
BKKJCBLI_1118893025tet(X)ARO:3000205tet(X)99.4797.42M37699.1

RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)

ResFinder

Query ID Begin End Resistance gene Phenotype Identity Coverage Accession no.
BKKJCBLI_1132384038erm(F)Erythromycin, Lincomycin, Clindamycin, Quinupristin, Pristinamycin IA, Virginiamycin S99.88100.00M17808
BKKJCBLI_1118593025tet(X)Doxycycline, Tetracycline, Minocycline, Tigecycline99.83100.00M37699
BKKJCBLI_225173452636cepAUnknown Beta-lactam99.56100.00FR688022
BKKJCBLI_102775629681tet(Q)Doxycycline, Tetracycline, Minocycline97.30100.00X58717

ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)

AMRFinderPlus

Query ID Begin End Gene symbol Sequence name Method Identity Coverage Accession no.
BKKJCBLI_225173752636cepACepA family extended-spectrum class A beta-lactamaseEXACTX100.00100.00WP_005795628.1
BKKJCBLI_227491775426lnu(AN2)lincosamide nucleotidyltransferase Lnu(AN2)EXACTX100.00100.00WP_004308783.1
BKKJCBLI_1132414038erm(F)23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(F)BLASTX99.62100.00WP_002682030.1
BKKJCBLI_1118593022tet(X2)tetracycline-inactivating monooxygenase Tet(X2)BLASTX99.48100.00WP_008651082.1
BKKJCBLI_227368774889mef(En2)macrolide efflux MFS transporter Mef(En2)BLASTX99.25100.00WP_063853729.1
BKKJCBLI_102775929681tet(Q)tetracycline resistance ribosomal protection protein Tet(Q)BLASTX97.19100.00WP_002560998.1

AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)

Virulence factors


Virulence Factor Database (VFDB)

Query ID qstart qend Gene name e-value VF name VF category Identity Coverage Accession no.
No hit found

BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)

VirulenceFinder

Query ID Begin End Database Virulence factor Protein function Identity Coverage Accession no.
No hit found

VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)

Pathogenic genes


PHI-base

Query ID qstart qend Gene name e-value Function Identity Coverage Gene ID
No hit found

BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)

Plasmid


PlasmidFinder

Query ID Begin End Plasmid Query / Template Identity Accession no.
No hit found

PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)

PlasmidHunter

Query ID Prediction Chromosome Plasmid
BKKJCBLI_10.01.00.0
BKKJCBLI_20.01.00.0
BKKJCBLI_30.01.00.0
BKKJCBLI_40.01.00.0
BKKJCBLI_50.01.00.0
BKKJCBLI_60.01.00.0
BKKJCBLI_70.01.00.0
BKKJCBLI_80.01.00.0
BKKJCBLI_90.01.00.0
BKKJCBLI_100.01.00.0
BKKJCBLI_110.01.00.0
BKKJCBLI_120.01.00.0
BKKJCBLI_130.01.00.0
BKKJCBLI_140.01.00.0
BKKJCBLI_150.01.00.0
BKKJCBLI_160.01.00.0
BKKJCBLI_171.00.01.0
BKKJCBLI_191.00.01.0
BKKJCBLI_201.00.01.0
BKKJCBLI_211.00.01.0
BKKJCBLI_220.01.00.0
BKKJCBLI_231.00.01.0
BKKJCBLI_241.00.01.0
BKKJCBLI_251.00.01.0
BKKJCBLI_310.01.00.0
BKKJCBLI_330.01.00.0
BKKJCBLI_340.01.00.0
BKKJCBLI_350.01.00.0
BKKJCBLI_360.01.00.0
BKKJCBLI_370.01.00.0
BKKJCBLI_380.01.00.0

PlasmidHunter v 1.4.5 (Database: May. 2024 release)

Prophage


Phigaro

Query ID Begin End Transposable Taxonomy pVOGs
BKKJCBLI_33343591354464FalseSiphoviridaeVOG3992,

Phigaro v2.4.0 (Database: Jan. 2024 release)


Insertion sequence (IS) elements