Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 0 | 0 | 2 | 2.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| No hit found | |||||||
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| MFIPPAPM_11 | 6479 | 5775 | WalR | 4.76e-113 | transcriptional regulatory protein | 83.40 | 100.00 | EPH95667 |
| MFIPPAPM_302 | 13816 | 14013 | CspR | 5.45e-34 | cold shock protein | 89.39 | 100.00 | AAO82613 |
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| MFIPPAPM_146 | 33496 | 34556 | repUS73 | 1061 / 1101 | 97.27 | CP002654 |
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| MFIPPAPM_1 | 1.0 | 0.0 | 1.0 |
| MFIPPAPM_2 | 1.0 | 0.0 | 1.0 |
| MFIPPAPM_3 | 1.0 | 0.0 | 1.0 |
| MFIPPAPM_4 | 1.0 | 0.0 | 1.0 |
| MFIPPAPM_5 | 1.0 | 0.0 | 1.0 |
| MFIPPAPM_6 | 1.0 | 0.0 | 1.0 |
| MFIPPAPM_7 | 1.0 | 0.0 | 1.0 |
| MFIPPAPM_8 | 1.0 | 0.0 | 1.0 |
| MFIPPAPM_9 | 1.0 | 0.0 | 1.0 |
| MFIPPAPM_10 | 1.0 | 0.0 | 1.0 |
| MFIPPAPM_11 | 0.0 | 1.0 | 0.0 |
| MFIPPAPM_12 | 0.0 | 1.0 | 0.0 |
| MFIPPAPM_13 | 0.0 | 1.0 | 0.0 |
| MFIPPAPM_14 | 1.0 | 0.0 | 1.0 |
| MFIPPAPM_15 | 1.0 | 0.0 | 1.0 |
| MFIPPAPM_16 | 1.0 | 0.0 | 1.0 |
| MFIPPAPM_17 | 1.0 | 0.0 | 1.0 |
| MFIPPAPM_18 | 1.0 | 0.0 | 1.0 |
| MFIPPAPM_19 | 1.0 | 0.0 | 1.0 |
| MFIPPAPM_20 | 0.0 | 1.0 | 0.0 |
| MFIPPAPM_21 | 0.0 | 1.0 | 0.0 |
| MFIPPAPM_22 | 0.0 | 1.0 | 0.0 |
| MFIPPAPM_23 | 1.0 | 0.0 | 1.0 |
| MFIPPAPM_25 | 1.0 | 0.0 | 1.0 |
| MFIPPAPM_26 | 1.0 | 0.0 | 1.0 |
| MFIPPAPM_27 | 0.0 | 1.0 | 0.0 |
| MFIPPAPM_29 | 0.0 | 1.0 | 0.0 |
| MFIPPAPM_30 | 1.0 | 0.0 | 1.0 |
| MFIPPAPM_31 | 1.0 | 0.0 | 1.0 |
| MFIPPAPM_32 | 0.0 | 1.0 | 0.0 |
| MFIPPAPM_33 | 0.0 | 1.0 | 0.0 |
| MFIPPAPM_34 | 0.0 | 1.0 | 0.0 |
| MFIPPAPM_35 | 0.0 | 1.0 | 0.0 |
| MFIPPAPM_36 | 1.0 | 0.0 | 1.0 |
| MFIPPAPM_37 | 1.0 | 0.0 | 1.0 |
| MFIPPAPM_38 | 1.0 | 0.0 | 1.0 |
| MFIPPAPM_39 | 1.0 | 0.0 | 1.0 |
| MFIPPAPM_40 | 1.0 | 0.0 | 1.0 |
| MFIPPAPM_41 | 1.0 | 0.0 | 1.0 |
| MFIPPAPM_42 | 0.0 | 1.0 | 0.0 |
| MFIPPAPM_43 | 1.0 | 0.0 | 1.0 |
| MFIPPAPM_44 | 0.0 | 1.0 | 0.0 |
| MFIPPAPM_45 | 1.0 | 0.0 | 1.0 |
| MFIPPAPM_46 | 1.0 | 0.0 | 1.0 |
| MFIPPAPM_47 | 1.0 | 0.0 | 1.0 |
| MFIPPAPM_48 | 1.0 | 0.0 | 1.0 |
| MFIPPAPM_49 | 1.0 | 0.0 | 1.0 |
| MFIPPAPM_50 | 1.0 | 0.0 | 1.0 |
| MFIPPAPM_51 | 1.0 | 0.0 | 1.0 |
| MFIPPAPM_52 | 1.0 | 0.0 | 1.0 |
| MFIPPAPM_53 | 1.0 | 0.0 | 1.0 |
| MFIPPAPM_54 | 0.0 | 1.0 | 0.0 |
| MFIPPAPM_55 | 1.0 | 0.0 | 1.0 |
| MFIPPAPM_57 | 0.0 | 1.0 | 0.0 |
| MFIPPAPM_58 | 1.0 | 0.0 | 1.0 |
| MFIPPAPM_59 | 1.0 | 0.0 | 1.0 |
| MFIPPAPM_60 | 1.0 | 0.0 | 1.0 |
| MFIPPAPM_61 | 1.0 | 0.0 | 1.0 |
| MFIPPAPM_62 | 1.0 | 0.0 | 1.0 |
| MFIPPAPM_63 | 0.0 | 1.0 | 0.0 |
| MFIPPAPM_64 | 0.0 | 1.0 | 0.0 |
| MFIPPAPM_65 | 1.0 | 0.0 | 1.0 |
| MFIPPAPM_66 | 1.0 | 0.0 | 1.0 |
| MFIPPAPM_67 | 1.0 | 0.0 | 1.0 |
| MFIPPAPM_68 | 0.0 | 1.0 | 0.0 |
| MFIPPAPM_69 | 1.0 | 0.0 | 1.0 |
| MFIPPAPM_70 | 1.0 | 0.0 | 1.0 |
| MFIPPAPM_71 | 1.0 | 0.0 | 1.0 |
| MFIPPAPM_72 | 0.0 | 1.0 | 0.0 |
| MFIPPAPM_75 | 1.0 | 0.0 | 1.0 |
| MFIPPAPM_76 | 1.0 | 0.0 | 1.0 |
| MFIPPAPM_77 | 1.0 | 0.0 | 1.0 |
| MFIPPAPM_78 | 1.0 | 0.0 | 1.0 |
| MFIPPAPM_79 | 1.0 | 0.0 | 1.0 |
| MFIPPAPM_80 | 1.0 | 0.0 | 1.0 |
| MFIPPAPM_83 | 0.0 | 1.0 | 0.0 |
| MFIPPAPM_93 | 0.0 | 1.0 | 0.0 |
| MFIPPAPM_104 | 0.0 | 1.0 | 0.0 |
| MFIPPAPM_105 | 0.0 | 1.0 | 0.0 |
| MFIPPAPM_115 | 1.0 | 0.0 | 1.0 |
| MFIPPAPM_125 | 0.0 | 1.0 | 0.0 |
| MFIPPAPM_135 | 0.0 | 1.0 | 0.0 |
| MFIPPAPM_146 | 1.0 | 0.0 | 1.0 |
| MFIPPAPM_157 | 0.0 | 1.0 | 0.0 |
| MFIPPAPM_168 | 0.0 | 1.0 | 0.0 |
| MFIPPAPM_179 | 0.0 | 1.0 | 0.0 |
| MFIPPAPM_190 | 0.0 | 1.0 | 0.0 |
| MFIPPAPM_201 | 0.0 | 1.0 | 0.0 |
| MFIPPAPM_212 | 0.0 | 1.0 | 0.0 |
| MFIPPAPM_213 | 0.0 | 1.0 | 0.0 |
| MFIPPAPM_224 | 0.0 | 1.0 | 0.0 |
| MFIPPAPM_235 | 0.0 | 1.0 | 0.0 |
| MFIPPAPM_246 | 0.0 | 1.0 | 0.0 |
| MFIPPAPM_257 | 0.0 | 1.0 | 0.0 |
| MFIPPAPM_268 | 1.0 | 0.0 | 1.0 |
| MFIPPAPM_279 | 0.0 | 1.0 | 0.0 |
| MFIPPAPM_280 | 0.0 | 1.0 | 0.0 |
| MFIPPAPM_281 | 0.0 | 1.0 | 0.0 |
| MFIPPAPM_282 | 0.0 | 1.0 | 0.0 |
| MFIPPAPM_283 | 0.0 | 1.0 | 0.0 |
| MFIPPAPM_284 | 0.0 | 1.0 | 0.0 |
| MFIPPAPM_285 | 0.0 | 1.0 | 0.0 |
| MFIPPAPM_286 | 0.0 | 1.0 | 0.0 |
| MFIPPAPM_287 | 0.0 | 1.0 | 0.0 |
| MFIPPAPM_288 | 0.0 | 1.0 | 0.0 |
| MFIPPAPM_289 | 0.0 | 1.0 | 0.0 |
| MFIPPAPM_290 | 0.0 | 1.0 | 0.0 |
| MFIPPAPM_291 | 0.0 | 1.0 | 0.0 |
| MFIPPAPM_292 | 0.0 | 1.0 | 0.0 |
| MFIPPAPM_293 | 0.0 | 1.0 | 0.0 |
| MFIPPAPM_294 | 0.0 | 1.0 | 0.0 |
| MFIPPAPM_295 | 0.0 | 1.0 | 0.0 |
| MFIPPAPM_296 | 0.0 | 1.0 | 0.0 |
| MFIPPAPM_297 | 0.0 | 1.0 | 0.0 |
| MFIPPAPM_298 | 1.0 | 0.0 | 1.0 |
| MFIPPAPM_299 | 0.0 | 1.0 | 0.0 |
| MFIPPAPM_300 | 0.0 | 1.0 | 0.0 |
| MFIPPAPM_301 | 0.0 | 1.0 | 0.0 |
| MFIPPAPM_302 | 1.0 | 0.0 | 1.0 |
| MFIPPAPM_303 | 0.0 | 1.0 | 0.0 |
| MFIPPAPM_304 | 0.0 | 1.0 | 0.0 |
| MFIPPAPM_305 | 0.0 | 1.0 | 0.0 |
| MFIPPAPM_306 | 0.0 | 1.0 | 0.0 |
| MFIPPAPM_307 | 0.0 | 1.0 | 0.0 |
| MFIPPAPM_308 | 0.0 | 1.0 | 0.0 |
| MFIPPAPM_309 | 0.0 | 1.0 | 0.0 |
| MFIPPAPM_310 | 0.0 | 1.0 | 0.0 |
| MFIPPAPM_311 | 0.0 | 1.0 | 0.0 |
| MFIPPAPM_312 | 0.0 | 1.0 | 0.0 |
| MFIPPAPM_313 | 0.0 | 1.0 | 0.0 |
| MFIPPAPM_314 | 1.0 | 0.0 | 1.0 |
| MFIPPAPM_315 | 0.0 | 1.0 | 0.0 |
| MFIPPAPM_316 | 0.0 | 1.0 | 0.0 |
| MFIPPAPM_317 | 0.0 | 1.0 | 0.0 |
| MFIPPAPM_318 | 0.0 | 1.0 | 0.0 |
| MFIPPAPM_319 | 0.0 | 1.0 | 0.0 |
| MFIPPAPM_320 | 0.0 | 1.0 | 0.0 |
| MFIPPAPM_321 | 1.0 | 0.0 | 1.0 |
| MFIPPAPM_322 | 0.0 | 1.0 | 0.0 |
| MFIPPAPM_323 | 1.0 | 0.0 | 1.0 |
| MFIPPAPM_324 | 0.0 | 1.0 | 0.0 |
| MFIPPAPM_325 | 1.0 | 0.0 | 1.0 |
| MFIPPAPM_326 | 1.0 | 0.0 | 1.0 |
| MFIPPAPM_327 | 0.0 | 1.0 | 0.0 |
| MFIPPAPM_328 | 0.0 | 1.0 | 0.0 |
| MFIPPAPM_329 | 1.0 | 0.0 | 1.0 |
| MFIPPAPM_330 | 1.0 | 0.0 | 1.0 |
| MFIPPAPM_331 | 0.0 | 1.0 | 0.0 |
| MFIPPAPM_332 | 1.0 | 0.0 | 1.0 |
| MFIPPAPM_333 | 1.0 | 0.0 | 1.0 |
| MFIPPAPM_334 | 1.0 | 0.0 | 1.0 |
| MFIPPAPM_335 | 0.0 | 1.0 | 0.0 |
| MFIPPAPM_336 | 0.0 | 1.0 | 0.0 |
| MFIPPAPM_337 | 0.0 | 1.0 | 0.0 |
| MFIPPAPM_338 | 0.0 | 1.0 | 0.0 |
| MFIPPAPM_339 | 0.0 | 1.0 | 0.0 |
| MFIPPAPM_340 | 1.0 | 0.0 | 1.0 |
| MFIPPAPM_341 | 1.0 | 0.0 | 1.0 |
| MFIPPAPM_342 | 1.0 | 0.0 | 1.0 |
| MFIPPAPM_343 | 1.0 | 0.0 | 1.0 |
| MFIPPAPM_344 | 1.0 | 0.0 | 1.0 |
| MFIPPAPM_345 | 1.0 | 0.0 | 1.0 |
| MFIPPAPM_346 | 1.0 | 0.0 | 1.0 |
| MFIPPAPM_347 | 0.0 | 1.0 | 0.0 |
| MFIPPAPM_348 | 0.0 | 1.0 | 0.0 |
| MFIPPAPM_349 | 0.0 | 1.0 | 0.0 |
| MFIPPAPM_350 | 0.0 | 1.0 | 0.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| MFIPPAPM_339 | 4338 | 12302 | False | Siphoviridae | VOG4599, VOG6455, VOG7896, VOG1637, VOG0703, VOG4918, VOG9953, VOG3477 |
| MFIPPAPM_339 | 28171 | 59120 | False | Siphoviridae | VOG9897, VOG4602, VOG6495, VOG5353, VOG4552, VOG0181, VOG10867, VOG4600, VOG1309, VOG11003, VOG4566, VOG0189, VOG4900, VOG5998, VOG5562, VOG4693, VOG0744, VOG4673, VOG9846, VOG4841, VOG0519, VOG4544, VOG4556, VOG4573, VOG4553, VOG0204, VOG4589, VOG1898, VOG4545, VOG4633, VOG4763, VOG3498, VOG0648, VOG1637 |
Phigaro v2.4.0 (Database: Jan. 2024 release)