Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 0 | 0 | 2 | 2.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| No hit found | |||||||
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| AEKIMBJB_90 | 159558 | 160262 | WalR | 1.63e-112 | transcriptional regulatory protein | 83.40 | 100.00 | EPH95667 |
| AEKIMBJB_83 | 16887 | 17084 | CspR | 1.08e-33 | cold shock protein | 89.39 | 100.00 | AAO82613 |
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| No hit found | ||||||
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| AEKIMBJB_1 | 0.0 | 1.0 | 0.0 |
| AEKIMBJB_2 | 0.0 | 1.0 | 0.0 |
| AEKIMBJB_3 | 1.0 | 0.0 | 1.0 |
| AEKIMBJB_4 | 1.0 | 0.0 | 1.0 |
| AEKIMBJB_5 | 1.0 | 0.0 | 1.0 |
| AEKIMBJB_6 | 1.0 | 0.0 | 1.0 |
| AEKIMBJB_7 | 1.0 | 0.0 | 1.0 |
| AEKIMBJB_8 | 1.0 | 0.0 | 1.0 |
| AEKIMBJB_9 | 1.0 | 0.0 | 1.0 |
| AEKIMBJB_10 | 1.0 | 0.0 | 1.0 |
| AEKIMBJB_13 | 0.0 | 1.0 | 0.0 |
| AEKIMBJB_24 | 0.0 | 1.0 | 0.0 |
| AEKIMBJB_35 | 0.0 | 1.0 | 0.0 |
| AEKIMBJB_46 | 0.0 | 1.0 | 0.0 |
| AEKIMBJB_57 | 0.0 | 1.0 | 0.0 |
| AEKIMBJB_58 | 0.0 | 1.0 | 0.0 |
| AEKIMBJB_69 | 0.0 | 1.0 | 0.0 |
| AEKIMBJB_80 | 0.0 | 1.0 | 0.0 |
| AEKIMBJB_83 | 0.0 | 1.0 | 0.0 |
| AEKIMBJB_84 | 0.0 | 1.0 | 0.0 |
| AEKIMBJB_85 | 0.0 | 1.0 | 0.0 |
| AEKIMBJB_86 | 0.0 | 1.0 | 0.0 |
| AEKIMBJB_87 | 0.0 | 1.0 | 0.0 |
| AEKIMBJB_88 | 0.0 | 1.0 | 0.0 |
| AEKIMBJB_89 | 0.0 | 1.0 | 0.0 |
| AEKIMBJB_90 | 0.0 | 1.0 | 0.0 |
| AEKIMBJB_91 | 0.0 | 1.0 | 0.0 |
| AEKIMBJB_92 | 0.0 | 1.0 | 0.0 |
| AEKIMBJB_93 | 1.0 | 0.0 | 1.0 |
| AEKIMBJB_94 | 0.0 | 1.0 | 0.0 |
| AEKIMBJB_95 | 0.0 | 1.0 | 0.0 |
| AEKIMBJB_96 | 0.0 | 1.0 | 0.0 |
| AEKIMBJB_97 | 0.0 | 1.0 | 0.0 |
| AEKIMBJB_98 | 0.0 | 1.0 | 0.0 |
| AEKIMBJB_99 | 0.0 | 1.0 | 0.0 |
| AEKIMBJB_100 | 0.0 | 1.0 | 0.0 |
| AEKIMBJB_101 | 0.0 | 1.0 | 0.0 |
| AEKIMBJB_102 | 0.0 | 1.0 | 0.0 |
| AEKIMBJB_103 | 0.0 | 1.0 | 0.0 |
| AEKIMBJB_104 | 0.0 | 1.0 | 0.0 |
| AEKIMBJB_105 | 0.0 | 1.0 | 0.0 |
| AEKIMBJB_106 | 0.0 | 1.0 | 0.0 |
| AEKIMBJB_107 | 1.0 | 0.0 | 1.0 |
| AEKIMBJB_108 | 1.0 | 0.0 | 1.0 |
| AEKIMBJB_109 | 0.0 | 1.0 | 0.0 |
| AEKIMBJB_110 | 1.0 | 0.0 | 1.0 |
| AEKIMBJB_111 | 1.0 | 0.0 | 1.0 |
| AEKIMBJB_112 | 0.0 | 1.0 | 0.0 |
| AEKIMBJB_113 | 1.0 | 0.0 | 1.0 |
| AEKIMBJB_114 | 0.0 | 1.0 | 0.0 |
| AEKIMBJB_115 | 1.0 | 0.0 | 1.0 |
| AEKIMBJB_116 | 0.0 | 1.0 | 0.0 |
| AEKIMBJB_118 | 0.0 | 1.0 | 0.0 |
| AEKIMBJB_119 | 0.0 | 1.0 | 0.0 |
| AEKIMBJB_120 | 1.0 | 0.0 | 1.0 |
| AEKIMBJB_121 | 1.0 | 0.0 | 1.0 |
| AEKIMBJB_122 | 1.0 | 0.0 | 1.0 |
| AEKIMBJB_123 | 0.0 | 1.0 | 0.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| AEKIMBJB_2 | 155212 | 157104 | False | Siphoviridae | VOG4799 |
| AEKIMBJB_83 | 37369 | 70946 | False | Siphoviridae | VOG9667, VOG6495, VOG1305, VOG8241, VOG1309, VOG0186, VOG4566, VOG6238, VOG1638, VOG8987, VOG11003, VOG9860, VOG6623, VOG4693, VOG10869, VOG0198, VOG4892, VOG4570, VOG4549, VOG0796, VOG4544, VOG0720, VOG4564, VOG4555, VOG3434, VOG1887, VOG1322, VOG4713, VOG0723, VOG5660, VOG0724, VOG0799, VOG0725, VOG0800, VOG4605, VOG4599, VOG6455, VOG7896, VOG7888, VOG0054 |
| AEKIMBJB_90 | 82874 | 93623 | False | Siphoviridae | VOG0204, VOG4568, VOG4556, VOG5051, VOG4544, VOG4581, VOG4841, VOG0205, VOG4606, VOG4632, VOG1581 |
| AEKIMBJB_94 | 19385 | 34080 | False | Siphoviridae | VOG4602, VOG6495, VOG5353, VOG4552, VOG0181, VOG10867, VOG4600, VOG1309, VOG11003, VOG4566, VOG0189, VOG7363, VOG5998, VOG5562, VOG4693, VOG0744, VOG4673, VOG4841, VOG0519, VOG4544 |
| AEKIMBJB_99 | 4609 | 18895 | False | Siphoviridae | VOG10059, VOG0181, VOG10867, VOG6450, VOG4967, VOG0321, VOG4548, VOG0322, VOG6545, VOG4632, VOG4609, VOG0327, VOG5998, VOG6795, VOG5562, VOG0198, VOG4841, VOG0519, VOG4544 |
Phigaro v2.4.0 (Database: Jan. 2024 release)