Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 7 | 0 | 0 | 7.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| PJMJBMKL_84 | 36291 | 38216 | tet(Q) | ARO:3000191 | tet(Q) | 96.41 | 97.56 | Z21523.1 |
| PJMJBMKL_151 | 8459 | 9259 | ErmF | ARO:3000498 | ErmF | 99.62 | 100.00 | M17124.1 |
| PJMJBMKL_150 | 8263 | 9228 | CfxA5 | ARO:3003096 | CfxA5 | 99.69 | 100.00 | AY769934.1 |
| PJMJBMKL_151 | 7110 | 8246 | tet(X) | ARO:3000205 | tet(X) | 99.74 | 97.42 | M37699.1 |
| PJMJBMKL_139 | 2817 | 3707 | CblA-1 | ARO:3002999 | CblA-1 | 97.64 | 100.00 | GQ343019.1 |
| PJMJBMKL_112 | 341 | 1546 | Mef(En2) | ARO:3004659 | Mef(En2) | 99.50 | 100.00 | AF251288.1 |
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| PJMJBMKL_151 | 8459 | 9259 | erm(F) | Erythromycin, Lincomycin, Clindamycin, Quinupristin, Pristinamycin IA, Virginiamycin S | 100.00 | 100.00 | M17808 |
| PJMJBMKL_151 | 7080 | 8246 | tet(X) | Doxycycline, Tetracycline, Minocycline, Tigecycline | 99.91 | 100.00 | M37699 |
| PJMJBMKL_150 | 8263 | 9228 | cfxA5 | Unknown Beta-lactam | 99.90 | 100.00 | AY769934 |
| PJMJBMKL_84 | 36291 | 38216 | tet(Q) | Doxycycline, Tetracycline, Minocycline | 99.84 | 100.00 | L33696 |
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| PJMJBMKL_151 | 8462 | 9259 | erm(F) | 23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(F) | EXACTX | 100.00 | 100.00 | WP_002682030.1 |
| PJMJBMKL_112 | 1571 | 2080 | lnu(AN2) | lincosamide nucleotidyltransferase Lnu(AN2) | EXACTX | 100.00 | 100.00 | WP_004308783.1 |
| PJMJBMKL_151 | 7080 | 8243 | tet(X2) | tetracycline-inactivating monooxygenase Tet(X2) | BLASTX | 99.74 | 100.00 | WP_008651082.1 |
| PJMJBMKL_150 | 8266 | 9228 | cfxA5 | broad-spectrum class A beta-lactamase CfxA5 | BLASTX | 99.69 | 100.00 | WP_032946415.1 |
| PJMJBMKL_84 | 36291 | 38213 | tet(Q) | tetracycline resistance ribosomal protection protein Tet(Q) | BLASTX | 99.53 | 100.00 | WP_063856407.1 |
| PJMJBMKL_112 | 341 | 1543 | mef(En2) | macrolide efflux MFS transporter Mef(En2) | BLASTX | 99.50 | 100.00 | WP_063853729.1 |
| PJMJBMKL_139 | 2820 | 3707 | cblA | CblA family class A beta-lactamase | BLASTX | 97.64 | 100.00 | WP_005827792.1 |
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| PJMJBMKL_32 | 1743 | 2422 | repUS2 | 682 / 681 | 98.53 | BFU30316 |
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| PJMJBMKL_1 | 1.0 | 0.0 | 1.0 |
| PJMJBMKL_2 | 0.0 | 1.0 | 0.0 |
| PJMJBMKL_3 | 1.0 | 0.0 | 1.0 |
| PJMJBMKL_4 | 0.0 | 1.0 | 0.0 |
| PJMJBMKL_5 | 0.0 | 1.0 | 0.0 |
| PJMJBMKL_6 | 1.0 | 0.0 | 1.0 |
| PJMJBMKL_7 | 1.0 | 0.0 | 1.0 |
| PJMJBMKL_8 | 0.0 | 1.0 | 0.0 |
| PJMJBMKL_9 | 1.0 | 0.0 | 1.0 |
| PJMJBMKL_10 | 1.0 | 0.0 | 1.0 |
| PJMJBMKL_11 | 0.0 | 1.0 | 0.0 |
| PJMJBMKL_12 | 0.0 | 1.0 | 0.0 |
| PJMJBMKL_13 | 1.0 | 0.0 | 1.0 |
| PJMJBMKL_14 | 0.0 | 1.0 | 0.0 |
| PJMJBMKL_15 | 1.0 | 0.0 | 1.0 |
| PJMJBMKL_16 | 1.0 | 0.0 | 1.0 |
| PJMJBMKL_17 | 1.0 | 0.0 | 1.0 |
| PJMJBMKL_18 | 1.0 | 0.0 | 1.0 |
| PJMJBMKL_19 | 1.0 | 0.0 | 1.0 |
| PJMJBMKL_20 | 1.0 | 0.0 | 1.0 |
| PJMJBMKL_21 | 1.0 | 0.0 | 1.0 |
| PJMJBMKL_22 | 0.0 | 1.0 | 0.0 |
| PJMJBMKL_23 | 1.0 | 0.0 | 1.0 |
| PJMJBMKL_24 | 1.0 | 0.0 | 1.0 |
| PJMJBMKL_25 | 0.0 | 1.0 | 0.0 |
| PJMJBMKL_26 | 1.0 | 0.0 | 1.0 |
| PJMJBMKL_27 | 1.0 | 0.0 | 1.0 |
| PJMJBMKL_28 | 1.0 | 0.0 | 1.0 |
| PJMJBMKL_29 | 1.0 | 0.0 | 1.0 |
| PJMJBMKL_30 | 1.0 | 0.0 | 1.0 |
| PJMJBMKL_31 | 1.0 | 0.0 | 1.0 |
| PJMJBMKL_32 | 1.0 | 0.0 | 1.0 |
| PJMJBMKL_33 | 0.0 | 1.0 | 0.0 |
| PJMJBMKL_34 | 0.0 | 1.0 | 0.0 |
| PJMJBMKL_35 | 0.0 | 1.0 | 0.0 |
| PJMJBMKL_36 | 0.0 | 1.0 | 0.0 |
| PJMJBMKL_37 | 0.0 | 1.0 | 0.0 |
| PJMJBMKL_38 | 1.0 | 0.0 | 1.0 |
| PJMJBMKL_39 | 1.0 | 0.0 | 1.0 |
| PJMJBMKL_40 | 1.0 | 0.0 | 1.0 |
| PJMJBMKL_41 | 1.0 | 0.0 | 1.0 |
| PJMJBMKL_42 | 1.0 | 0.0 | 1.0 |
| PJMJBMKL_43 | 1.0 | 0.0 | 1.0 |
| PJMJBMKL_44 | 0.0 | 1.0 | 0.0 |
| PJMJBMKL_45 | 1.0 | 0.0 | 1.0 |
| PJMJBMKL_46 | 1.0 | 0.0 | 1.0 |
| PJMJBMKL_47 | 1.0 | 0.0 | 1.0 |
| PJMJBMKL_48 | 1.0 | 0.0 | 1.0 |
| PJMJBMKL_49 | 1.0 | 0.0 | 1.0 |
| PJMJBMKL_55 | 0.0 | 1.0 | 0.0 |
| PJMJBMKL_60 | 0.0 | 1.0 | 0.0 |
| PJMJBMKL_61 | 0.0 | 1.0 | 0.0 |
| PJMJBMKL_62 | 0.0 | 1.0 | 0.0 |
| PJMJBMKL_63 | 0.0 | 1.0 | 0.0 |
| PJMJBMKL_64 | 0.0 | 1.0 | 0.0 |
| PJMJBMKL_65 | 0.0 | 1.0 | 0.0 |
| PJMJBMKL_66 | 0.0 | 1.0 | 0.0 |
| PJMJBMKL_67 | 0.0 | 1.0 | 0.0 |
| PJMJBMKL_68 | 0.0 | 1.0 | 0.0 |
| PJMJBMKL_69 | 0.0 | 1.0 | 0.0 |
| PJMJBMKL_70 | 0.0 | 1.0 | 0.0 |
| PJMJBMKL_71 | 0.0 | 1.0 | 0.0 |
| PJMJBMKL_72 | 0.0 | 1.0 | 0.0 |
| PJMJBMKL_73 | 0.0 | 1.0 | 0.0 |
| PJMJBMKL_74 | 0.0 | 1.0 | 0.0 |
| PJMJBMKL_75 | 0.0 | 1.0 | 0.0 |
| PJMJBMKL_76 | 0.0 | 1.0 | 0.0 |
| PJMJBMKL_77 | 0.0 | 1.0 | 0.0 |
| PJMJBMKL_78 | 0.0 | 1.0 | 0.0 |
| PJMJBMKL_79 | 0.0 | 1.0 | 0.0 |
| PJMJBMKL_80 | 0.0 | 1.0 | 0.0 |
| PJMJBMKL_81 | 0.0 | 1.0 | 0.0 |
| PJMJBMKL_82 | 0.0 | 1.0 | 0.0 |
| PJMJBMKL_83 | 1.0 | 0.0 | 1.0 |
| PJMJBMKL_84 | 0.0 | 1.0 | 0.0 |
| PJMJBMKL_85 | 0.0 | 1.0 | 0.0 |
| PJMJBMKL_86 | 0.0 | 1.0 | 0.0 |
| PJMJBMKL_87 | 0.0 | 1.0 | 0.0 |
| PJMJBMKL_88 | 0.0 | 1.0 | 0.0 |
| PJMJBMKL_89 | 0.0 | 1.0 | 0.0 |
| PJMJBMKL_90 | 0.0 | 1.0 | 0.0 |
| PJMJBMKL_91 | 0.0 | 1.0 | 0.0 |
| PJMJBMKL_92 | 1.0 | 0.0 | 1.0 |
| PJMJBMKL_93 | 0.0 | 1.0 | 0.0 |
| PJMJBMKL_94 | 0.0 | 1.0 | 0.0 |
| PJMJBMKL_95 | 0.0 | 1.0 | 0.0 |
| PJMJBMKL_96 | 0.0 | 1.0 | 0.0 |
| PJMJBMKL_97 | 0.0 | 1.0 | 0.0 |
| PJMJBMKL_98 | 0.0 | 1.0 | 0.0 |
| PJMJBMKL_99 | 0.0 | 1.0 | 0.0 |
| PJMJBMKL_100 | 0.0 | 1.0 | 0.0 |
| PJMJBMKL_101 | 0.0 | 1.0 | 0.0 |
| PJMJBMKL_102 | 0.0 | 1.0 | 0.0 |
| PJMJBMKL_103 | 0.0 | 1.0 | 0.0 |
| PJMJBMKL_104 | 0.0 | 1.0 | 0.0 |
| PJMJBMKL_105 | 0.0 | 1.0 | 0.0 |
| PJMJBMKL_106 | 0.0 | 1.0 | 0.0 |
| PJMJBMKL_107 | 0.0 | 1.0 | 0.0 |
| PJMJBMKL_108 | 0.0 | 1.0 | 0.0 |
| PJMJBMKL_109 | 0.0 | 1.0 | 0.0 |
| PJMJBMKL_110 | 0.0 | 1.0 | 0.0 |
| PJMJBMKL_111 | 0.0 | 1.0 | 0.0 |
| PJMJBMKL_112 | 0.0 | 1.0 | 0.0 |
| PJMJBMKL_113 | 0.0 | 1.0 | 0.0 |
| PJMJBMKL_114 | 1.0 | 0.0 | 1.0 |
| PJMJBMKL_115 | 0.0 | 1.0 | 0.0 |
| PJMJBMKL_116 | 0.0 | 1.0 | 0.0 |
| PJMJBMKL_117 | 0.0 | 1.0 | 0.0 |
| PJMJBMKL_118 | 0.0 | 1.0 | 0.0 |
| PJMJBMKL_119 | 0.0 | 1.0 | 0.0 |
| PJMJBMKL_120 | 0.0 | 1.0 | 0.0 |
| PJMJBMKL_121 | 0.0 | 1.0 | 0.0 |
| PJMJBMKL_122 | 0.0 | 1.0 | 0.0 |
| PJMJBMKL_123 | 0.0 | 1.0 | 0.0 |
| PJMJBMKL_124 | 0.0 | 1.0 | 0.0 |
| PJMJBMKL_125 | 0.0 | 1.0 | 0.0 |
| PJMJBMKL_126 | 0.0 | 1.0 | 0.0 |
| PJMJBMKL_127 | 0.0 | 1.0 | 0.0 |
| PJMJBMKL_128 | 0.0 | 1.0 | 0.0 |
| PJMJBMKL_129 | 0.0 | 1.0 | 0.0 |
| PJMJBMKL_130 | 1.0 | 0.0 | 1.0 |
| PJMJBMKL_131 | 0.0 | 1.0 | 0.0 |
| PJMJBMKL_132 | 0.0 | 1.0 | 0.0 |
| PJMJBMKL_133 | 0.0 | 1.0 | 0.0 |
| PJMJBMKL_134 | 0.0 | 1.0 | 0.0 |
| PJMJBMKL_135 | 0.0 | 1.0 | 0.0 |
| PJMJBMKL_136 | 0.0 | 1.0 | 0.0 |
| PJMJBMKL_137 | 0.0 | 1.0 | 0.0 |
| PJMJBMKL_138 | 1.0 | 0.0 | 1.0 |
| PJMJBMKL_139 | 0.0 | 1.0 | 0.0 |
| PJMJBMKL_140 | 1.0 | 0.0 | 1.0 |
| PJMJBMKL_141 | 0.0 | 1.0 | 0.0 |
| PJMJBMKL_142 | 0.0 | 1.0 | 0.0 |
| PJMJBMKL_143 | 0.0 | 1.0 | 0.0 |
| PJMJBMKL_144 | 0.0 | 1.0 | 0.0 |
| PJMJBMKL_145 | 0.0 | 1.0 | 0.0 |
| PJMJBMKL_146 | 1.0 | 0.0 | 1.0 |
| PJMJBMKL_147 | 0.0 | 1.0 | 0.0 |
| PJMJBMKL_148 | 1.0 | 0.0 | 1.0 |
| PJMJBMKL_149 | 1.0 | 0.0 | 1.0 |
| PJMJBMKL_150 | 0.0 | 1.0 | 0.0 |
| PJMJBMKL_151 | 0.0 | 1.0 | 0.0 |
| PJMJBMKL_152 | 1.0 | 0.0 | 1.0 |
| PJMJBMKL_153 | 0.0 | 1.0 | 0.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| PJMJBMKL_83 | 12726 | 27596 | False | Siphoviridae | VOG0025, |
Phigaro v2.4.0 (Database: Jan. 2024 release)