Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 2 | 0 | 0 | 2.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| JNKNJNAN_164 | 125117 | 127042 | tet(Q) | ARO:3000191 | tet(Q) | 96.41 | 97.56 | Z21523.1 |
| JNKNJNAN_97 | 3524 | 4489 | CfxA2 | ARO:3003002 | CfxA2 | 100.00 | 100.00 | AF118110.1 |
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| JNKNJNAN_97 | 3524 | 4489 | cfxA3 | Ampicillin | 99.90 | 100.00 | AF472622 |
| JNKNJNAN_97 | 3524 | 4489 | cfxA4 | Unknown Beta-lactam | 99.90 | 100.00 | AY769933 |
| JNKNJNAN_97 | 3524 | 4489 | cfxA5 | Unknown Beta-lactam | 99.90 | 100.00 | AY769934 |
| JNKNJNAN_97 | 3524 | 4489 | cfxA | Cefoxitin, Ampicillin | 99.90 | 100.00 | U38243 |
| JNKNJNAN_164 | 125117 | 127042 | tet(Q) | Doxycycline, Tetracycline, Minocycline | 99.84 | 100.00 | L33696 |
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| JNKNJNAN_97 | 3524 | 4486 | cfxA | CfxA family broad-spectrum class A beta-lactamase | EXACTX | 100.00 | 100.00 | WP_004339683.1 |
| JNKNJNAN_164 | 125117 | 127039 | tet(Q) | tetracycline resistance ribosomal protection protein Tet(Q) | BLASTX | 99.53 | 100.00 | WP_063856407.1 |
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| JNKNJNAN_162 | 71 | 750 | repUS2 | 682 / 681 | 98.53 | BFU30316 |
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| JNKNJNAN_1 | 0.0 | 1.0 | 0.0 |
| JNKNJNAN_2 | 1.0 | 0.0 | 1.0 |
| JNKNJNAN_3 | 1.0 | 0.0 | 1.0 |
| JNKNJNAN_5 | 1.0 | 0.0 | 1.0 |
| JNKNJNAN_6 | 0.0 | 1.0 | 0.0 |
| JNKNJNAN_7 | 1.0 | 0.0 | 1.0 |
| JNKNJNAN_8 | 1.0 | 0.0 | 1.0 |
| JNKNJNAN_10 | 0.0 | 1.0 | 0.0 |
| JNKNJNAN_11 | 0.0 | 1.0 | 0.0 |
| JNKNJNAN_12 | 1.0 | 0.0 | 1.0 |
| JNKNJNAN_13 | 1.0 | 0.0 | 1.0 |
| JNKNJNAN_14 | 1.0 | 0.0 | 1.0 |
| JNKNJNAN_15 | 1.0 | 0.0 | 1.0 |
| JNKNJNAN_16 | 0.0 | 1.0 | 0.0 |
| JNKNJNAN_17 | 0.0 | 1.0 | 0.0 |
| JNKNJNAN_18 | 1.0 | 0.0 | 1.0 |
| JNKNJNAN_19 | 0.0 | 1.0 | 0.0 |
| JNKNJNAN_20 | 0.0 | 1.0 | 0.0 |
| JNKNJNAN_21 | 1.0 | 0.0 | 1.0 |
| JNKNJNAN_22 | 0.0 | 1.0 | 0.0 |
| JNKNJNAN_23 | 1.0 | 0.0 | 1.0 |
| JNKNJNAN_24 | 1.0 | 0.0 | 1.0 |
| JNKNJNAN_25 | 1.0 | 0.0 | 1.0 |
| JNKNJNAN_26 | 1.0 | 0.0 | 1.0 |
| JNKNJNAN_27 | 0.0 | 1.0 | 0.0 |
| JNKNJNAN_28 | 0.0 | 1.0 | 0.0 |
| JNKNJNAN_29 | 0.0 | 1.0 | 0.0 |
| JNKNJNAN_30 | 1.0 | 0.0 | 1.0 |
| JNKNJNAN_33 | 0.0 | 1.0 | 0.0 |
| JNKNJNAN_44 | 0.0 | 1.0 | 0.0 |
| JNKNJNAN_55 | 0.0 | 1.0 | 0.0 |
| JNKNJNAN_66 | 0.0 | 1.0 | 0.0 |
| JNKNJNAN_72 | 0.0 | 1.0 | 0.0 |
| JNKNJNAN_73 | 0.0 | 1.0 | 0.0 |
| JNKNJNAN_74 | 0.0 | 1.0 | 0.0 |
| JNKNJNAN_75 | 0.0 | 1.0 | 0.0 |
| JNKNJNAN_76 | 0.0 | 1.0 | 0.0 |
| JNKNJNAN_77 | 0.0 | 1.0 | 0.0 |
| JNKNJNAN_78 | 0.0 | 1.0 | 0.0 |
| JNKNJNAN_79 | 0.0 | 1.0 | 0.0 |
| JNKNJNAN_80 | 0.0 | 1.0 | 0.0 |
| JNKNJNAN_81 | 1.0 | 0.0 | 1.0 |
| JNKNJNAN_82 | 0.0 | 1.0 | 0.0 |
| JNKNJNAN_83 | 0.0 | 1.0 | 0.0 |
| JNKNJNAN_84 | 0.0 | 1.0 | 0.0 |
| JNKNJNAN_85 | 0.0 | 1.0 | 0.0 |
| JNKNJNAN_86 | 0.0 | 1.0 | 0.0 |
| JNKNJNAN_87 | 0.0 | 1.0 | 0.0 |
| JNKNJNAN_88 | 0.0 | 1.0 | 0.0 |
| JNKNJNAN_89 | 0.0 | 1.0 | 0.0 |
| JNKNJNAN_90 | 0.0 | 1.0 | 0.0 |
| JNKNJNAN_91 | 0.0 | 1.0 | 0.0 |
| JNKNJNAN_92 | 0.0 | 1.0 | 0.0 |
| JNKNJNAN_93 | 0.0 | 1.0 | 0.0 |
| JNKNJNAN_94 | 0.0 | 1.0 | 0.0 |
| JNKNJNAN_95 | 0.0 | 1.0 | 0.0 |
| JNKNJNAN_96 | 1.0 | 0.0 | 1.0 |
| JNKNJNAN_97 | 0.0 | 1.0 | 0.0 |
| JNKNJNAN_98 | 0.0 | 1.0 | 0.0 |
| JNKNJNAN_99 | 0.0 | 1.0 | 0.0 |
| JNKNJNAN_100 | 0.0 | 1.0 | 0.0 |
| JNKNJNAN_101 | 0.0 | 1.0 | 0.0 |
| JNKNJNAN_102 | 0.0 | 1.0 | 0.0 |
| JNKNJNAN_103 | 0.0 | 1.0 | 0.0 |
| JNKNJNAN_104 | 0.0 | 1.0 | 0.0 |
| JNKNJNAN_105 | 0.0 | 1.0 | 0.0 |
| JNKNJNAN_106 | 0.0 | 1.0 | 0.0 |
| JNKNJNAN_107 | 0.0 | 1.0 | 0.0 |
| JNKNJNAN_108 | 0.0 | 1.0 | 0.0 |
| JNKNJNAN_109 | 0.0 | 1.0 | 0.0 |
| JNKNJNAN_110 | 0.0 | 1.0 | 0.0 |
| JNKNJNAN_111 | 0.0 | 1.0 | 0.0 |
| JNKNJNAN_112 | 0.0 | 1.0 | 0.0 |
| JNKNJNAN_113 | 0.0 | 1.0 | 0.0 |
| JNKNJNAN_114 | 1.0 | 0.0 | 1.0 |
| JNKNJNAN_115 | 0.0 | 1.0 | 0.0 |
| JNKNJNAN_116 | 0.0 | 1.0 | 0.0 |
| JNKNJNAN_117 | 0.0 | 1.0 | 0.0 |
| JNKNJNAN_118 | 0.0 | 1.0 | 0.0 |
| JNKNJNAN_119 | 1.0 | 0.0 | 1.0 |
| JNKNJNAN_120 | 0.0 | 1.0 | 0.0 |
| JNKNJNAN_121 | 0.0 | 1.0 | 0.0 |
| JNKNJNAN_122 | 0.0 | 1.0 | 0.0 |
| JNKNJNAN_123 | 0.0 | 1.0 | 0.0 |
| JNKNJNAN_124 | 1.0 | 0.0 | 1.0 |
| JNKNJNAN_125 | 1.0 | 0.0 | 1.0 |
| JNKNJNAN_126 | 0.0 | 1.0 | 0.0 |
| JNKNJNAN_127 | 0.0 | 1.0 | 0.0 |
| JNKNJNAN_128 | 1.0 | 0.0 | 1.0 |
| JNKNJNAN_129 | 0.0 | 1.0 | 0.0 |
| JNKNJNAN_130 | 0.0 | 1.0 | 0.0 |
| JNKNJNAN_131 | 0.0 | 1.0 | 0.0 |
| JNKNJNAN_132 | 0.0 | 1.0 | 0.0 |
| JNKNJNAN_133 | 0.0 | 1.0 | 0.0 |
| JNKNJNAN_134 | 0.0 | 1.0 | 0.0 |
| JNKNJNAN_135 | 0.0 | 1.0 | 0.0 |
| JNKNJNAN_136 | 0.0 | 1.0 | 0.0 |
| JNKNJNAN_137 | 0.0 | 1.0 | 0.0 |
| JNKNJNAN_138 | 1.0 | 0.0 | 1.0 |
| JNKNJNAN_139 | 0.0 | 1.0 | 0.0 |
| JNKNJNAN_140 | 1.0 | 0.0 | 1.0 |
| JNKNJNAN_141 | 0.0 | 1.0 | 0.0 |
| JNKNJNAN_142 | 0.0 | 1.0 | 0.0 |
| JNKNJNAN_143 | 0.0 | 1.0 | 0.0 |
| JNKNJNAN_144 | 0.0 | 1.0 | 0.0 |
| JNKNJNAN_145 | 0.0 | 1.0 | 0.0 |
| JNKNJNAN_146 | 0.0 | 1.0 | 0.0 |
| JNKNJNAN_147 | 0.0 | 1.0 | 0.0 |
| JNKNJNAN_148 | 0.0 | 1.0 | 0.0 |
| JNKNJNAN_149 | 1.0 | 0.0 | 1.0 |
| JNKNJNAN_150 | 0.0 | 1.0 | 0.0 |
| JNKNJNAN_151 | 0.0 | 1.0 | 0.0 |
| JNKNJNAN_152 | 1.0 | 0.0 | 1.0 |
| JNKNJNAN_153 | 0.0 | 1.0 | 0.0 |
| JNKNJNAN_154 | 1.0 | 0.0 | 1.0 |
| JNKNJNAN_155 | 1.0 | 0.0 | 1.0 |
| JNKNJNAN_156 | 1.0 | 0.0 | 1.0 |
| JNKNJNAN_157 | 1.0 | 0.0 | 1.0 |
| JNKNJNAN_158 | 1.0 | 0.0 | 1.0 |
| JNKNJNAN_159 | 0.0 | 1.0 | 0.0 |
| JNKNJNAN_160 | 0.0 | 1.0 | 0.0 |
| JNKNJNAN_161 | 0.0 | 1.0 | 0.0 |
| JNKNJNAN_162 | 1.0 | 0.0 | 1.0 |
| JNKNJNAN_163 | 1.0 | 0.0 | 1.0 |
| JNKNJNAN_164 | 0.0 | 1.0 | 0.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| JNKNJNAN_33 | 62969 | 76650 | False | Siphoviridae | VOG4564, |
| JNKNJNAN_78 | 25055 | 33926 | False | Unknown | VOG4855, |
| JNKNJNAN_79 | 35737 | 44004 | False | Siphoviridae | VOG0204, |
Phigaro v2.4.0 (Database: Jan. 2024 release)